Os07g0621500

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0621500| Description = Zinc finger, RING-type domain containing protein| Version = NM_001066843.2 GI:297607633 GeneID:4343940| Length = 454...")
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Gene Name

Os07g0621500

Description

Zinc finger, RING-type domain containing protein

Version

NM_001066843.2 GI:297607633 GeneID:4343940

Length

4546 bp

Definition

Oryza sativa Japonica Group Os07g0621500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26343627..26348172

Sequence Coding Region

26343672..26344931

Expression

GEO Profiles:Os07g0621500

Genome Context

<gbrowseImage1> name=NC_008400:26343627..26348172 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26343627..26348172 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgttggtgtcctcaggccttaaccagtgttcttcttcatgtaggcgtgtcttacaatttggaaaagaatgaatatggtatattccgtgtcaagcttactgcaaacgccacaaaaacaatagcagacttgagaaggcctcttgagattttaatgaaaggcaaaacaataaaccatcctgatctgacactaagtacagttcagttgctcatgtcccgtgatggtgtagcagatttgaaatctgttgagcaagagactggcacttacattctgtatgacagacaaagtctaaatattaaagtctttggactccaagatcaggttgctgcagcagaggagaaattgatccatgcccttctacaactccgtgataagaaacctttggatattcgtcttcgtggccgtaacctacctccaaacttgatgaaggaaatgttaaaaaagttcggggctgatctggaaggattgaagagagaggtgcctgcagtagagcttcgattaaatttacgacaacatacactttacgttcgaggcagtaaagaagacaagcaaagggtggaagaaatgatctctgagctggtaaattctacaaagtacaatggcctgcttcaacttccattagagaatgcatgccctatttgcctgtgtgaggtagaagatccctttaagcttgaatcttgtgggcatgtgttttgtctgacttgcttggtggatcagtgtgaatctgctttgaaatcacatgatggtttccctctgtgttgcctcaaaaatgggtgcaagaagcagctccttgttgttgatttgagatctctcctatcgagcgagaaactggaagagctatttagagcctccttgagagcatttgttgcttctaatgcaggaaaatatcgtttctgtcctactcctgattgcccatccatttaccaagtggctgctgcagatgctgaaagcaaaccttttgtctgtggggcttgctttgtggagatctgcaacaagtgtcatcttgaatatcatcctttcatatcctgtgaggcatacaaagaatacaaggaagaccctgatgcaactctgcttgaatggcgcaaggggaaggagaatgtgaaggtatgcccttcttgccactttacaatcgagaaagctgatggttgcaaccatgtcgagtgtaaatgtggcagtcacatttgttgggcatgcttggagaacttcaggagcagtgatgattgttatagccatctcaggtctgtgcacctatcctattaa</cdnaseq>

Protein Sequence

<aaseq>MCWCPQALTSVLLHVGVSYNLEKNEYGIFRVKLTANATKTIADL RRPLEILMKGKTINHPDLTLSTVQLLMSRDGVADLKSVEQETGTYILYDRQSLNIKVF GLQDQVAAAEEKLIHALLQLRDKKPLDIRLRGRNLPPNLMKEMLKKFGADLEGLKREV PAVELRLNLRQHTLYVRGSKEDKQRVEEMISELVNSTKYNGLLQLPLENACPICLCEV EDPFKLESCGHVFCLTCLVDQCESALKSHDGFPLCCLKNGCKKQLLVVDLRSLLSSEK LEELFRASLRAFVASNAGKYRFCPTPDCPSIYQVAAADAESKPFVCGACFVEICNKCH LEYHPFISCEAYKEYKEDPDATLLEWRKGKENVKVCPSCHFTIEKADGCNHVECKCGS HICWACLENFRSSDDCYSHLRSVHLSY</aaseq>

Gene Sequence

<dnaseqindica>3242..4501#aatatgtccctgatatatcagaagaggcttccttcaataccgtgccaaaccatctgcgcggttcttgtgctactgcttcatatgtttacgatgttgtgaaaatggtaagcatcattcacaagaatgaagaagagggtgctatccttgctttcttgacttctcaactcgaagttgaatgggcatgtgaaaacttcagcgatgcagatgctgtggtacttccgatgcatggaaagctttcccatgtagagcaaagtctagttttcaagagctatcctgggaagagaaaaataatcttctgcacaaatattgctgaaacatcattgaccataaaagaagtgaagtatgttgttgattctggactggctaaggagagcagatttgtgcctagcagtggtctcaatgtactgaaagttaattggatctcccaaagttctgctaatcagcgtgctggccgagcaggtcgaactggagcggggaggtgttacaggctttactctgaatctgacttcagtatgatggaagtgcatcaagaacctgaaatccgcaaagttcatcttggcactgctgttctgagaatacttgcgctgggtattagggatgcacagaattttgaatttgttgatgccccaaacccagaagctattaatatggctgtaaagaatcttgaacaactgggtgctgtaaaatataaatgtgatggttttgagctgactgatactggtcgctacctagttaaattgggaatcgagccgaggcttgggaaaatcatgcttgattgctttggttttggtttgaggaaggaaggtgtagttctagctgctgttatggcaaattctagcagcatattttgtagagtgggcacagatgaggagaaatacaaagctgaccgtctaaaggtcccattctgtcatcaggatggagatctgttcactttactagctgtatataaagagtgggaggatgagcatgaaaacaggaatacgtggtgctggcagaatagcatcaatgccaagaccatgaggaggtgccaggaaacaatatcagaccttgagaattgtttaagacacgagctgaacatcattgtcccaagttactggtgttggaaccctgaggagtccaccgtgcatgataagttgctaaaaagaattattctcacatctctttctggtaatattgctatgttttctggacatgaaaggtttggttaccaggtgatttcaacggatcaggctgtgaaactacatccctcttgctcattgctcatttatgatagcaagcctgagtgggtggtgttcacagaaatcttgtcagtaccaaatcaatatttggtatgtgtaactgctattgatcctgatgctttgtgttcgattcaccccatgcctttgattcagcaactggagaagcttaaattgcaggtgaaggtaataagtggacttggatataacttgctgagaaaattttgtggaaaatctggccaaaatcagcagaagataatctcacttctccaagaagaattcagggatgaccgtgtgactgttgaagttgacttcagaaataaagaggttgtgctatttgccaaagaacaagacatagaaaaggtgtttggcatcgttaatgatgcattggagtgtgaagctcggatgttgaggaatgaatgccttgagaaaagtttgttttctggaaaacctggtgattgttctcttgccctatttggttctggtgctgaaataaagcatttggaacttgagaagaggtatctgaccgtagaggttttgcatcaaaatgctcatgagttgaatgacaaggagcttatttgcttggtggatactcttatctctggtgttgctaatttttataaactttatggaaatcttcaggtggcctcagatgaaacgaagtgggggaagtttacattcctcaatcctgaatatgctgaagatgctgtttcaaaattgaatgggatggaatttcatggttctccattgaaagtggttccagtatgctcttccagtaatcgaggattaccatttccagcagtgagagctaaagtatcttggccacttaagcaaagtcggggactcgcgctggtaacatgtgccagtggggaagctgaatttgttgtaaaggactgctttgctctgggagttggtggaaggtatatcaactgtgaggttagtacaagacatgagaattgcatttttgtcagaggaattccaatgcatgtaacagagccagaattgtatgatgcctttcgtagcacgacaacaaggaaaatcgttgatgtgcatttgctcaggggaacacccatagctgccccttctgcttccttgtgtgcagaagcactaaatagagaaatttcttccttcatgccaaagaaaatttttcctgcccaaaatttccgtgttgaggtgttaactccagaggagaatgattcggtgatgagagccactattacttttgatggaagtcttcatcgagaggctgcaagagcattggaacatcttcaaggaagtgttcttccatgctgtcttccttggcagacaatacaatgccagcatgtgtttcatagtactgtgtcctgtcaagtacgcgtgtataatgttatcagccaagcagttgcttctcttcttgagagcttccgaagccaaaaaggtaattctgcattccttataacttcttaaactctgctgcttctaattttccatactgttcagttgaatgatcctcttcattttcatgattgcatgaatgttattttcccatacttcagttttatatgatttacgaacagtatgtttgaggcatattttccctgaaattcatagttttattgatgggaaaaaaattactttcctgttttctattttgtggaaggatagaaaattaaacacaacaaggcagtttggatgggtctcaaatcttggctcatctatgtatgtgggccactggcccttcgtcaaacaaatatcttgtctttgataagggcaaatctgtgaccattcaatgtgtataccaatgttgctaactgatgatgtttggaagtttgaaaatgtcacttttttctatgagttgcattcctaatttatctcagtagatgtaaatattatccaggtcttttccatccacagtttttacattcaataaccggtggtcatttggtcactgcgtggtaactagcagtgacacctttcttagacggccttaataatgtttagttgttttggactgcaaaaatatttgtatgtgttggtgtcctcaggccttaaccagtgttcttcttcatgtaggcgtgtcttacaatttggaaaagaatgaatatggtatattccgtgtcaagcttactgcaaacgccacaaaaacaatagcagacttgagaaggcctcttgagattttaatgaaaggcaaaacaataaaccatcctgatctgacactaagtacagttcagttgctcatgtcccgtgatggtgtagcagatttgaaatctgttgagcaagagactggcacttacattctgtatgacagacaaagtctaaatattaaagtctttggactccaagatcaggttgctgcagcagaggagaaattgatccatgcccttctacaactccgtgataagaaacctttggatattcgtcttcgtggccgtaacctacctccaaacttgatgaaggaaatgttaaaaaagttcggggctgatctggaaggattgaagagagaggtgcctgcagtagagcttcgattaaatttacgacaacatacactttacgttcgaggcagtaaagaagacaagcaaagggtggaagaaatgatctctgagctggtaaattctacaaagtacaatggcctgcttcaacttccattagagaatgcatgccctatttgcctgtgtgaggtagaagatccctttaagcttgaatcttgtgggcatgtgttttgtctgacttgcttggtggatcagtgtgaatctgctttgaaatcacatgatggtttccctctgtgttgcctcaaaaatgggtgcaagaagcagctccttgttgttgatttgagatctctcctatcgagcgagaaactggaagagctatttagagcctccttgagagcatttgttgcttctaatgcaggaaaatatcgtttctgtcctactcctgattgcccatccatttaccaagtggctgctgcagatgctgaaagcaaaccttttgtctgtggggcttgctttgtggagatctgcaacaagtgtcatcttgaatatcatcctttcatatcctgtgaggcatacaaagaatacaaggaagaccctgatgcaactctgcttgaatggcgcaaggggaaggagaatgtgaaggtatgcccttcttgccactttacaatcgagaaagctgatggttgcaaccatgtcgagtgtaaatgtggcagtcacatttgttgggcatgcttggagaacttcaggagcagtgatgattgttatagccatctcaggtctgtgcacctatcctattaacatatcatgtaaatttgtataaattggtacaaataattatgtgta</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0621500, RefSeq:Os07g0621500