Os07g0621800

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0621800| Description = Alcohol dehydrogenase superfamily, zinc-containing protein| Version = NM_001066845.1 GI:115473422 GeneID:4343942| Le...")
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Gene Name

Os07g0621800

Description

Alcohol dehydrogenase superfamily, zinc-containing protein

Version

NM_001066845.1 GI:115473422 GeneID:4343942

Length

7186 bp

Definition

Oryza sativa Japonica Group Os07g0621800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26357052..26364237

Sequence Coding Region

26357206..26357346,26357745..26357906,26358233..26358396,26358854..26358929,26359306..26359388
,26360130..26360455,26363724..26363764,26363923..26364056,26364146..26364191

Expression

GEO Profiles:Os07g0621800

Genome Context

<gbrowseImage1> name=NC_008400:26357052..26364237 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26357052..26364237 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagatgaacactgctgctgcaaagtccatcaggtgcagagcggcggtgagcagggtggccgggcagccgctggagatggaggaggtggaggtggcgccgccgcgggcgcacgaggtccggatcaagatcctctgcacatccatctgccacacggacatcaccttctggcgtatggaaggcaatcatccgtctatctttggccatgaagcagtcggtgtggtggagagcgtgggggagcacgtgcaggaggtggcggtgggtgacatggtggtgccggtgttcgccgcgcagtgcagtgagtgccctgactgcctctccgaccgcagcaacctctgctccaaactgcccaacgtcgccggcctcatgcctcgcgaccgcacgacgcgcttctcctccgtctccaccggcgagcccatccgccacttcctctccgtctccagcttcgccgagtacaccgtcgttgacatcacccacattgtcaagctcgatgttggattcccaccggcgatggcatgcctcctcagttgtggcatttccaccggtgttggtgcggcatggaaggtggcagcagtggagcccggctcgagtgtcgccgtgttcggcctgggtgccgttgggttagcggttgctcaaggggcgaggatgcgtggggctaagaggattattggggtggacctgaacccggacaaattcgacgttggtaagaggctgggcatgaccgacttcatcaacccgaacgataccggcgggaagaccgtgagcgaggtcatcaaggagatgaccgggggcggcggcgccgactactgcttcgagtgcatcggctcgacttcggtcatggcggaagccttccaaagcactcgaaatgggtgggggaagacgatcctgctcggcgtctccggcaacaaggcgccgatcagcatcccgtcgcacgagatcctccggggaagatcggtcatcgggtcgctcttcggcggcatcaagcccaagaacgacatcccgatgctggctcagaagtacctggacaaggagctggagctggaggagttcatcacgcacgagatggggttcgaggagatcaacagggcgttcgagctgctcacgcaggggaagagcatccgctgcatcatctggatggacggcgccaaggtgatcgacaacggcgagtga</cdnaseq>

Protein Sequence

<aaseq>MEQMNTAAAKSIRCRAAVSRVAGQPLEMEEVEVAPPRAHEVRIK ILCTSICHTDITFWRMEGNHPSIFGHEAVGVVESVGEHVQEVAVGDMVVPVFAAQCSE CPDCLSDRSNLCSKLPNVAGLMPRDRTTRFSSVSTGEPIRHFLSVSSFAEYTVVDITH IVKLDVGFPPAMACLLSCGISTGVGAAWKVAAVEPGSSVAVFGLGAVGLAVAQGARMR GAKRIIGVDLNPDKFDVGKRLGMTDFINPNDTGGKTVSEVIKEMTGGGGADYCFECIG STSVMAEAFQSTRNGWGKTILLGVSGNKAPISIPSHEILRGRSVIGSLFGGIKPKNDI PMLAQKYLDKELELEEFITHEMGFEEINRAFELLTQGKSIRCIIWMDGAKVIDNGE</aaseq>

Gene Sequence

<dnaseqindica>6892..7032#6332..6493#5842..6005#5309..5384#4850..4932#3783..4108#474..514#182..315#47..92#agccaaacaccaacaaggatagaggggagaggctagcttcctggaaatggagcagatgaacactgctgctgcaaagtccatcaggtgcagaggtgagctagcatctgagatcgagttttgcaatggcgtcgttggctgattctctgacgagacgttctgtgccgtcgacggcggcgtgcagcggcggtgagcagggtggccgggcagccgctggagatggaggaggtggaggtggcgccgccgcgggcgcacgaggtccggatcaagatcctctgcacatccatctgccacacggacatcaccttctggcgtatggtaaccatgaattcttcagttctttctcccttaaattcaggttattgcgtatttaaattcagatgtgatccgtctagaattgagagcaaccaagaactattttgcttctctatgatgaggttatactcataggctcatagctctcttctcatttgtaggaaggcaatcatccgtctatctttggccatgaagcagtcgggtacgtaatcaaacaaattaaactatatagctcttataaacatagagacattccacgcttctgattctgaacatactctctgatccgatccactgcacgtatgtactagtattattcgccttttgtactgttttgtgctcttcctgatgagtttgatcctgcgtcggtgttaagatgactttgagcctcagatcagtagcgtggtaatgaacacacagcatcaacagctaaggaatgacattgtttttgaacatggtaggaccgtgaaaaatttcaggaataaaccattcaaaagaagatatgaatcgtgaattaatccatggacgtaggggaaggttgcatccaaagcttgtgttgcaataatcattgtcaacaacctctacctggcgtgtccttatgagatattccagctgacattagggatagtcgtcgcattggcgtagataaggtggcttagaaaaatggtgaccgtactaagcattttattctctatcttttgcctgccaagttttgggtgaactaatcatctaattagcctttacctaatcgtagtcaggtctctatagtaatttaatttaggagtacgtccttcctgaccaggaaagacagtataatttttttccgaggcgtaaaagttttgcaggtcaatatattagaaaagcattaaacataacgatgacttgtcgtagcgatcacagaggattttacagtgaggcgaaaaactaagccccgaacaacgaaaagacaatccagcaacgggtgattgacgatttccggctcctgcgcgtaaagctgagataaaatgtgtggatgtcgatgcccagcccgccgtccgaaaaccatgtgatagttattagagcacctgcaatagtaaagtaatgtgctatttataaaatatgtacatctcagtaatagactagattaatagtaaaccacttcaatagtacgtctacatgggtatctatagctctctaatgcattgccttgtttttctctatagactatctccaggttagtagatagctttgctctctctcttcatttaatctcttccaagtagaaaaatatgctgatatggatctcttgtagagagcctatagataactattgcgggtgcccttagtgtgacaaaccactaagtttgatcctctaacatcctatcaatgcagcaatcaattaacggacacagctgcatgttgaggtggctaggtgagcgtagatattagataggagtatcacaattatatactcccttcgtactcgtaaagaaattcgtttaggacaatgtttaagtcaaaccttgggaatataagggcatgttcactttgatgccattttcaaccttaccaaattttagtaaaagttgcaaaaaagtggctacatttagtttgctgccaatttttggtaactatataagaaatcttgccaaaattttagcaagttgacaaaattttggcaactatactaaaattttggcaatgccaaaatttggtaaggtttttttagcatcaaagtgaacaggccctaaatcatgaataactctcaagttgttgagtttgaaaatattatagagtaaaatgcatcagcggtacacgaacttgtcaggtgggtgcaatctaatacatgaacttgtaaaatgcttgttttggtacatgaacttatttggtacgtgcaagctaaggctaaaatgacatgactagactgaattttctatgttgaacattataaattataaattaatagataacgtccgtgcacatagtagaaaaagttatatttgcaaacttagttttcactttatctttctttgtgtttatccttgcattactacttgcattatttttgttatgcgatcattacgccttattatatgtttatctttcttagacacatgtttacatagagtttaaatcaataacaaaattagtaagattaaccttgccgtgcgattttgaccttgttcacacgcatcaaacaagttcatgcatcaaaatgagcgttttacaagtttatatactagattgcacccacctgacaagttcgtgtaccattgatgcaatttactctataaaaattatatgaatagatttgtcttaaaaatactttcataaaagtatacatatatcattttttaataaatatttttatagaaacaagaagtcaaagttgtgttttggagaccgtgtcgctattctaaacgacttcctttacgagtacggagggagtatactacatccattccaaattgatttacatatttcataggtacaccaagaccaagaaaagctaataactctctcatactatatttactctagcatcaaactcaatgcatgcacgattcccactattttctagccaatagcaaatcaagatattacatgtgggttataaatacttgtgtgcatgtatgcatgtatcaatgtccatttactccaatgcacaaataacgaatagacttaataaatgaacacaaatatgtagattatttaggaataattaaaaaaattatatgtagatcagtttagaatggagtgagtaactactaatcagcaacgcttgatggagaaatcgtctgactatggagtatccacaaattgatataaaaaagtttttttttaaaaccgtaaaaaaagagagtttgatttaggctcgtactagcagctatgatcagacttctggaatcacctattgaggagttctaagagttgggatgagttgtggtgcagatctcaatcgctgtctgagtccatttatccgcaatgtgttacacataaagttactcatcccaactatatgatttagagaaaattactttatgggttattttaccggtttattccttatctctttccttctagcaagtttctctcttgtctcttgtttttgaaggttttttttaagataggagtgtatatgtgtaagtcgtaatgctattgtcttattgaagagatacatataaataaaaacaataatacctaagaaacaccttatgaacaagttaaacatattttatctcttattatttgtcagttggtttatcggtcacaatcaaatacaacttgagttttgaaacttatataagctgattttatattattttttcatcatactctatttactacctttgactttcaaataattacaaatagagatattttctatataaaaaaccgtccattattcgtgttttttttctaatacttgttaattgttagctgtagctcaaccgtgtgccataattttatcatacatttattttctccagtgtggtggagagcgtgggggagcacgtgcaggaggtggcggtgggtgacatggtggtgccggtgttcgccgcgcagtgcagtgagtgccctgactgcctctccgaccgcagcaacctctgctccaaactgcccaacgtcgccggcctcatgcctcgcgaccgcacgacgcgcttctcctccgtctccaccggcgagcccatccgccacttcctctccgtctccagcttcgccgagtacaccgtcgttgacatcacccacattgtcaagctcgatgttggattcccaccggcgatggcatgcctcctcagttgtggcatttccaccggtaaaaacagaagaagaaaaaaacacaaactttaaagtggtttctgcctcaagtattttatagttgagttctattcatcggttcaaaacaacaactttcttatttcgagaggactttccaaactgctaaatgatatattttatgaaatattttctctacagaagttttaaaaaacaaaaataattttcaaatttagaatagttaattctcaatttaatcatacactaacaacttgttttcgttgtgtataaggccaagccaatatacgtagggtctgtttggcaaagtttcaactcctaattttagctacgtgagttgagtctggagtgaggatcggtttagcacagctccagctctatctccatctcttctggagctagagctgaagctcagccaaacagtttcagctccacttaaaatgggagtggagctggattgagctctctcaaaaaaattgaactataggggtggacctaaacccagctccacctcactaatttattttataacaacgttctatccaactacactgctattttaggtgaaactaaaactgtttggctagctctagaagacgcggagcaagatgtgtgctcctacttgaactcagccttaactgcagttgtttggcatgtggtctctgccgctacagtagcggatgcatggctcccattggcgcagtacacgcagtcgtgtgttatcggatcgatttctgactgcgactttgattggtgcgtgcaggtgttggtgcggcatggaaggtggcagcagtggagcccggctcgagtgtcgccgtgttcggcctgggtgccgttgggttagcggtaattaacgacagtgcttaactctgatatagaccaccaaactgagaagttagtgttcgtgtttggcttggaccagagttgccggtgcccaactgcagctgatgcatagcctgtgttttagttctaaaaaaaattaaaagtttttaaaaaaagttaaaagtttatatgtgtagcaacgttttggatgtaatgtgatatgatgaaaagttgaaatacgatgtaatgaaaagttaaaagttgagggcagttggagtgaactaaatacggtcatagtagatcgatcgtctctgtgctgatctaattttaatgcaatgtcgacgtctcatcgagctaatgacctaatgtacgactgtgtgctggctactgcatgctgcaggttgctcaaggggcgaggatgcgtggggctaagaggattattggggtggacctgaacccggacaaattcgacgttggtatgttcgtgataattaagctcgaagcggtgtttgaattcagtcccgtctggaatgcgaagaatttatgttgcctaattcatacgaaaatttgaactgtttaatatttaaatcacacaaatgaaacggtaccttggtttgggtggttaagtacgtcgggaaatgattttaaattttcgagatgatatttttttctagcatgtcattcaaatagttataaaaataatttattaatatataatatatcactacataaatatgtgagttaaaattccacttctatgaattacaacaaaagagcaaattgtgcatgtctgcgaagtaatgtatcgtgcattaatcttgctgaatttttttataatcattgaatgtggtatatacaaataatgaacgaatattccctaagagagtttagaatcattctcctatctggctaactcgtctcattgcgttgcaggtaagaggctgggcatgaccgacttcatcaacccgaacgataccggcgggaagaccgtgagcgaggtcatcaaggagatgaccgggggcggcggcgccgactactgcttcgagtgcatcggctcgacttcggtcatggcggaagccttccaaagcactcgaaatgtacgagctacttgctctgcttgtgcagtagagactagataccaaggctctgtttggggagctttgtgtcagctgcagtttttctcataaactgcttctgctagaaactgccacaaacagtccacagtttctgagaatctgtagttacagattttaaaaaatgaactaataagttagaagctggagaaactgggtttcaaaactttttcaaaactttttcagattctcagaaactgtctaccaaataactgcttctcagagtttaaacctccccaaacaggccctaagagcagcagcaagctgatcggaatttcacgttattccaggggtgggggaagacgatcctgctcggcgtctccggcaacaaggcgccgatcagcatcccgtcgcacgagatcctccggggaagatcggtcatcgggtcgctcttcggcggcatcaagcccaagaacgacatcccgatgctggctcagaagtacctggacaaggtgatccacatcgatcgatctaacgggattttaattaatttgtttggttcatattactcctttcatgctaaaatatactccctaattttaaattataagtttactatgttcaaaatcaaactattttaagtctgataaagtttgtagataaatatagtaatatttacaacaccagattagttttattaaatcaatactttaatatatttttataatacgtttgccttggattaaaaatgtttttttctataaatttgattaaatttaaagtagtttgattttgagtaaagtcaaaacgatttataacctacaacggagggagtatattttaaaacgaaaatactacatatcttttgtgtctgattaattaaccggtgtgtgtatgcttgcatctgcaggagctggagctggaggagttcatcacgcacgagatggggttcgaggagatcaacagggcgttcgagctgctcacgcaggggaagagcatccgctgcatcatctggatggacggcgccaaggtgatcgacaacggcgagtgatcgcggcatcgtcgtcctgtcgctaataaccgattaaccgctgataccctgggaaacagttgagcctcgctgttaactcaaactgtccgtcgtgtctttctgaaggctttgtctgttctctgttctgcataaaaaatgcggttgacagcgagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0621800, RefSeq:Os07g0621800