Os07g0622200

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0622200| Description = Similar to M-160-u1_1 (Fragment)| Version = NM_001066849.1 GI:115473430 GeneID:4343946| Length = 3591 bp| Definitio...")
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Gene Name

Os07g0622200

Description

Similar to M-160-u1_1 (Fragment)

Version

NM_001066849.1 GI:115473430 GeneID:4343946

Length

3591 bp

Definition

Oryza sativa Japonica Group Os07g0622200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26386594..26390184

Sequence Coding Region

26386877..26387155,26387574..26387819,26387926..26388202,26389211..26389488,26389582..26390115

Expression

GEO Profiles:Os07g0622200

Genome Context

<gbrowseImage1> name=NC_008400:26386594..26390184 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26386594..26390184 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgccaccaactccgccgctgtttccggtggcgctgcggccgcggcgtcgtcggcgccccagccgcggctcgccgccacgttcctcccgatgaggaggcgaaccgtctcggcggtccacgcggccgacccggcgaagagcaacgggcccgtgcaggccgcggcgaaggcctcgtccccgtcgacggtggcggcgccggagaagaagccggtggggttggggaagtggacggtggatagctggaaggcgaagaaggcgctgcagctgcccgagtacccgagccaggaggagctcgactccgtgctcaagacgatcgagacgttcccgcccgtggtgttcgccggggaggcgcgccacctcgaggagcgcctcgccgacgccgccatgggccgcgccttcgtcctccagggcggcgactgcgccgagagcttcaaggagttcaacgccaacaacatccgtgacaccttccgcatcctgctccagatgggcgccgtcctcatgttcggcggccagatgcccgtcgtcaaggtcgggaggatggctggccagttcgccaagccgaggtctgattcgttcgaggagagggacggggttaagctgccgagttacaggggagacaacatcaatggcgacaccttcgacgagaagagccgcgtgccggacccgcagcggatgatccgcgcgtacgcgcagtcggtggcaacgctcaacctgctccgcgccttcgccacgggagggtacgccgccatgcagcgcgtcacgcagtggaacctcgatttcatggatcacagcgaacaaggagacaggtaccgtgaattggcacaccgggtggatgaggcacttggcttcatgactgcagcagggctaacagtcgaccatccgataatgacaacaactgacttctggacatcccatgagtgcctcctcttaccatatgagcagtctcttacacgtgaggattccaccagtggcctcttctatgactgctcagcccacatgctatgggttggtgagcgcactcgccagctcgatggagctcatgttgaatttctccgtggtgttgccaaccctcttggcataaaggtgagtgacaaaatgaacccccgtgacttggtgaagctcattgagattttgaacccatcaaacaagcctggaaggataaccataattacaagaatgggggcagagaacatgagggtgaaattgcctcatcttatccgtgctgtccgcaactctggacagattgtcacatggattactgatcccatgcatggaaacaccatcaaggctccatgtggtctgaagactcgtccattcgattccattctggctgaagtacgtgcgttcttcgatgtccatgatcaagaaggtagccacccaggaggtatccacctggaaatgactgggcagaacgtgactgaatgcatcggtggatcaaggaccgtcaccttcgatgacctgagcgaccgctaccacacccactgtgacccaaggctgaacgcgtcgcaatccctggagctcgccttcatcatcgccgagagactgaggcggaggaggatgcggtccggggtcaacagcaacctgccattgcccccattggctttctaa</cdnaseq>

Protein Sequence

<aaseq>MALATNSAAVSGGAAAAASSAPQPRLAATFLPMRRRTVSAVHAA DPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDS VLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRI LLQMGAVLMFGGQMPVVKVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEK SRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRYRELA HRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAH MLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITII TRMGAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRA FFDVHDQEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLE LAFIIAERLRRRRMRSGVNSNLPLPPLAF</aaseq>

Gene Sequence

<dnaseqindica>3030..3308#2366..2611#1983..2259#697..974#70..603#agaggagccccgcctaccgccgccctcacgcctcctcccacctacctcacctcgaagctgacgtcagcaatggcgctcgccaccaactccgccgctgtttccggtggcgctgcggccgcggcgtcgtcggcgccccagccgcggctcgccgccacgttcctcccgatgaggaggcgaaccgtctcggcggtccacgcggccgacccggcgaagagcaacgggcccgtgcaggccgcggcgaaggcctcgtccccgtcgacggtggcggcgccggagaagaagccggtggggttggggaagtggacggtggatagctggaaggcgaagaaggcgctgcagctgcccgagtacccgagccaggaggagctcgactccgtgctcaagacgatcgagacgttcccgcccgtggtgttcgccggggaggcgcgccacctcgaggagcgcctcgccgacgccgccatgggccgcgccttcgtcctccagggcggcgactgcgccgagagcttcaaggagttcaacgccaacaacatccgtgacaccttccgcatcctgctccagatgggcgccgtcctcatgttcggcggccagatgcccgtcgtcaaggtacccaaaatccaaaccccaaaacgagctcatccttcacgcgattcgcgagatctgatcccgatctgctccaaattttgtgcgcgagtttaggtcgggaggatggctggccagttcgccaagccgaggtctgattcgttcgaggagagggacggggttaagctgccgagttacaggggagacaacatcaatggcgacaccttcgacgagaagagccgcgtgccggacccgcagcggatgatccgcgcgtacgcgcagtcggtggcaacgctcaacctgctccgcgccttcgccacgggagggtacgccgccatgcagcgcgtcacgcagtggaacctcgatttcatggatcacagcgaacaaggagacaggtgagaaattcatttctctccccttttttttcatacgattttttagcactttttgttgcggaagttgttaaagtcgctttcgatttaaaagatatcagtgttgaattgcttccacatatctcgttatcatgataaggctagagctgcttataggttgctggtgataacacggtttcaccccttttggaatctgtgtgaccgtgtaagtaatgggtggtgaacatgttcttgaaagtatgaacccagtcatctgctcttgaaaatggtctgatattctaatttgcagcttgaataagtaaatggaaacattttaggtggtcgcagctcgtcaatgtttaataaaaatcacgtggtagttctgattccatcaatcagtagttggtgagttgtcctgttagaagctttcactttctgtcccttcctttcgaggaaactgctaacgggacatcattgtcctttgcatccaactttctgaataattgttaggaagctgcccgtttttgctattttcatggtatggaataccatggaattgttggttaaaaaggcatgcaattatctgaggcgtacccatttcagaatacataattaactaaactacccgtccatgaaatttatcgtcggtcgtgctctaatttagcatctgtaaccttctttggatttataatgttgacttatgcagtgttaacgtatttatattttcttcagacatgcgtccaataaagattataaagaatttattgttagaatgttgttttgactttttctgtaaaagatggtgttccgacaaaatacaaagttgccatcataataagacattgaaatgccattttgttggtggtatttgcaaattgcaaataagagcagctcattggtatactgcataagtgctgttggtatattatcgatttgccgctacatatgcaattgtttacgttacagaataaaatatgcttgtaacgactgaatcgagaggttatccaatgattgtctctattttgtgtataggtaccgtgaattggcacaccgggtggatgaggcacttggcttcatgactgcagcagggctaacagtcgaccatccgataatgacaacaactgacttctggacatcccatgagtgcctcctcttaccatatgagcagtctcttacacgtgaggattccaccagtggcctcttctatgactgctcagcccacatgctatgggttggtgagcgcactcgccagctcgatggagctcatgttgaatttctccgtggtgttgccaaccctcttggcataaaggtcagcattgagtttattttcataaagttatgtgaaatcctaatgttgtttgcagtgccttgtggatgttgacatttcaaactgacattgaccctgtgtaatgtaggtgagtgacaaaatgaacccccgtgacttggtgaagctcattgagattttgaacccatcaaacaagcctggaaggataaccataattacaagaatgggggcagagaacatgagggtgaaattgcctcatcttatccgtgctgtccgcaactctggacagattgtcacatggattactgatcccatgcatggaaacaccatcaaggctccatgtggtctgaagactcgtccattcgattccattctggtgagtatttttctgctacagcattccatatttgctagtatcctttcctagtatgatgcaacaatccggtcaatctcacataaggaattaccctcattccccaacttcgactgcacagttatttaacagtactgaaaattgagtgataactcggtatgctatatgcataaagttcctgtctagtgcattggccatttgtatcccaagttcccatctagtgcattagagtatctgtttatgtcagtgagaatgtgacacttttgggcatatgctatatcagcaaaaatcctaggcgtttctaattctatggtatgagaagaaaagtgtaccactgctgaaacggaactgtaacctttgttaaactagcgtcattttggactattggtcaaataaacatgaacattgctgtgtttcacaggctgaagtacgtgcgttcttcgatgtccatgatcaagaaggtagccacccaggaggtatccacctggaaatgactgggcagaacgtgactgaatgcatcggtggatcaaggaccgtcaccttcgatgacctgagcgaccgctaccacacccactgtgacccaaggctgaacgcgtcgcaatccctggagctcgccttcatcatcgccgagagactgaggcggaggaggatgcggtccggggtcaacagcaacctgccattgcccccattggctttctaaactgctgaaacgggggaagggaaaagaaactgggaggagggggtagaatagtttcaactcgccggcggtgatatctgcatgtgttctgtcaaatgtttgtatggtggttgttgagtgttcttggcactataggcagttgtcgaggatatggtagcatatatactcgccgtgttgtaataagttttttgatggatgtgttctgatgaatttttaagggggcctcagctctgtgctgtttggccttggggacaggagaaaataaagctagatggtttgcttggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0622200, RefSeq:Os07g0622200