Os07g0623300

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0623300| Description = Similar to Splicing factor SC35| Version = NM_001066857.1 GI:115473446 GeneID:4343955| Length = 3127 bp| Definition...")
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Gene Name

Os07g0623300

Description

Similar to Splicing factor SC35

Version

NM_001066857.1 GI:115473446 GeneID:4343955

Length

3127 bp

Definition

Oryza sativa Japonica Group Os07g0623300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26453677..26456803

Sequence Coding Region

26453788..26453863,26453972..26454050,26454150..26454229,26454325..26454391,26455285..26455356
,26455808..26455960,26456046..26456129,26456211..26456427

Expression

GEO Profiles:Os07g0623300

Genome Context

<gbrowseImage1> name=NC_008400:26453677..26456803 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26453677..26456803 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcgcttcggccgctccggcccgccgccgatccgcgacacctactccctcctcgtcctcaacatcaccttccgcactacggcggatgacctctcccctctcttcgagaagtacggcgaggtcgtcgacatctacatccctagggaccgcaggactggtgattcgcgagggtttgcgttcgtgaggtacaagtatgaggacgaggcgcagaaggcagtcgatcggcttgacgggagagtggtagatggaagggagatcatggtgcagtttgccaagtacggcccgaacgctgaacgaatccataaaggaaaaatcatggagacagttccaaggtctaggggtcgttccagaagccgcagtccaagacgggggtaccgtgatgactatcgggagagagactatagaaagcggagtcggagtagagatagatatggacgtgacaggtatagggagagagattatcgtcgtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacagtgtgtcacctgcacgcagaagcctgagtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggcaaacacagtcaatcgcctgtgtgtaaaagccccagtgcaaaaagaagccccagtatgtcgcctgcacgcagaagccccagtgcttcgcctgcacgtagaagccctagtgcttcgcctgtgcgcagaagccctagtcgctctcctcgcaggacaccatcttctcaagagggatctcctgtcaagcgctatgatgagcctaggcgctctcgtagcccttcgacgtaa</cdnaseq>

Protein Sequence

<aaseq>MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVD IYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIH KGKIMETVPRSRGRSRSRSPRRGYRDDYRERDYRKRSRSRDRYGRDRYRERDYRRRSR SRSYTPDDYRRRGRDSVSPARRSLSRSRSRSYSPDDYRKRGKHSQSPVCKSPSAKRSP SMSPARRSPSASPARRSPSASPVRRSPSRSPRRTPSSQEGSPVKRYDEPRRSRSPST</aaseq>

Gene Sequence

<dnaseqindica>112..187#296..374#474..553#649..715#1609..1680#2132..2284#2370..2453#2535..2751#gtggccaccctcaccctaccccgacctctctcatcctcgccctcaccgtctccacccgccgcgccgcgtcccggccaccgcgccgcccgccgcgctccgctccggcgagacatgtcgcgcttcggccgctccggcccgccgccgatccgcgacacctactccctcctcgtcctcaacatcaccttccgtcagtttcctctctctccctctctatccatctcgtgcggcgcgcgcgctgtgtgttcgcttctcctcggggggttctgaatcgagttgttgctcgtgtgttccgcaggcactacggcggatgacctctcccctctcttcgagaagtacggcgaggtcgtcgacatctacatccctagggaccgcaggttagtatggtgacgaggagtgtgagaactggggcacatagaatttctagggtttggggaattgggagctgattaggtcggctgtactgtctgttctaggactggtgattcgcgagggtttgcgttcgtgaggtacaagtatgaggacgaggcgcagaaggcagtcgatcggcttgacggtgagattcatcgataacgagacagtgattcatgcagtttgagattgatgggtttgcgctgttgatgatttgctgtctgagtttttttttttcagggagagtggtagatggaagggagatcatggtgcagtttgccaagtacggcccgaacgctgaacgaatgtaagatgcactgtttcgttatcgttgctcaagtaatcatggatgaaacattaaatgttgatggcatgtctatatctctgtctaattggaggctctcgtaggatccccttatttatcccaggaggcaaaataatctagaaattgcatgttaaacgaaaattgtattatggtatattggtatatgttgtctgatttacttgggccatgataattttggtggttgttaaatataactttcggcaactcctggttggaagtgtgagcttatacattaggatttagccttttgcagtgctaaaactaccatgtaaggatgtaactgagtaaaacaaagaaaaaactctagcaagttatcacacctaaagtaagttttgaagttagctctacttctacattcccttgcaaattacttagtcaacaccagatctttatctaatagtagtatgatgttattgttagttttatgaggttcaatgcttatttactaagttgtatagcttgtcataaatttgttgaggaatatggcatcccaaagtttttttttcccgtttgtgcatcaacaacaacgttgaagggctcaacacctgtggtttagttgcaaaatattgtacattcacttaaccatgatgttgttaggcaataagttgtaaattttgtcaagaggcttgttaggtacagttgtacagaaaatgatttatagtactatgtagtggtcaaaagcaagttcatcttatgtgttctggcagcataaattagagtttattattctaaatatttcgtagtaaagcatcccatgctaaaaattaactggcacatgtcatgtggtaaagctgctctccttgttaggatttaactatgcatgtacaattaacctttttatctggattatgcagccataaaggaaaaatcatggagacagttccaaggtctaggggtcgttccagaagccgcagtccaagacgggggtattacatcatttctctaaatattatgcttacacatagtatttcttaaaagtgattcaggactttgggtggtctgcaaaaggaggaaaaaatgtgttctctacttctattaactttctgtgtgtttcaacgtttaacccaatgggcatttcatgattccctttgcaacattgtgctcaaacattctgtttcatttgtcacatataccagattcataaaaaacatgtcataacttttattgttggtgttgttgcctctagtactacagagtacagatctttgtagttctttaatgttgcttttttgttgtaatatttagataagctgtcagtttgggatatgctattgtgtattaccaagcttattctggtcatgcccttcgtagttgggcccttgttcactttgtgtattgatatcctgtttataatcatattgtataccacatttgaaggtaccgtgatgactatcgggagagagactatagaaagcggagtcggagtagagatagatatggacgtgacaggtatagggagagagattatcgtcgtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacaggtaattattagataattgactttgttatttttatctttcttgttttcacaatctttctgtcttcttattctatgattacctgcagtgtgtcacctgcacgcagaagcctgagtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggcaaacacaggtatgcacatgggagaattagttttgttgttttactgaacgacattaatattgctgccttttgttatgttatttctgacagtcaatcgcctgtgtgtaaaagccccagtgcaaaaagaagccccagtatgtcgcctgcacgcagaagccccagtgcttcgcctgcacgtagaagccctagtgcttcgcctgtgcgcagaagccctagtcgctctcctcgcaggacaccatcttctcaagagggatctcctgtcaagcgctatgatgagcctaggcgctctcgtagcccttcgacgtaaagctgaatatcaagaatatgcatcaaacagctgaggtctttggattgttcacatagtttaagtcattgtagttaaatgtcttttttttaaaaaaatacatcttatgtttctgtctaataggatgaatggagtagagctgctcatgtcaagaggctgttcggtgcctgatgatggaaggctccggtgaaaaattggaagttacagggagtgctatcagttgctgttacaagtgaacactggtttcttgtgaacaccttaacgcttgttaagaactatatgtacttcaattccttttcatacagacttgtctcttagcatttgatagtatcacttctcttttggtacttggtacttactataaatggtaatttgaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0623300, RefSeq:Os07g0623300