Os07g0627800

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0627800| Description = Similar to DRG-like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p| Version = NM_001066882.1 GI:...")
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Gene Name

Os07g0627800

Description

Similar to DRG-like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p

Version

NM_001066882.1 GI:115473496 GeneID:4343980

Length

5132 bp

Definition

Oryza sativa Japonica Group Os07g0627800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26679753..26684884

Sequence Coding Region

26680069..26680119,26680214..26680265,26680349..26680540,26680637..26680936,26681553..26681662
,26682433..26682492,26682572..26682643,26682909..26683085,26683582..26683635
,26684722..26684763

Expression

GEO Profiles:Os07g0627800

Genome Context

<gbrowseImage1> name=NC_008400:26679753..26684884 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26679753..26684884 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccgtcatgcagaagatcaaggacatcgaggacgagatggcaaggacgcagaagaacaaggccactgcacaccatcttggtcttctgaaggctaaacttgcaaaattacgccgtgagttgctgactcctacatccaaaggtggtggtggcggtgctggcgagggatttgatgtgacaaaaagtggagatgcacgtgttggtttggtgggctttccttcagttggaaaatcaacattgttgaacaagctgacaggaacattttcagaggttgcagcctacgaattcacaactttaacatgtattcctggagttataatgtacaaaggggctaaaatccagcttttagatcttccaggaatcattgagggtgctaaagatggaaagggtagaggaaggcaggttatcagcacagcaaggacatgcaatgtcattctgattgttcttgatgccattaagccaataacccacaagcggcttattgagaaggagcttgagggatttggcattaggttgaacaagacaccccccaatttgacatttagaagaaaggacaagggtggcatcaattttacatcaactgtgacgaacacaaacttggatcttgaaacagtaaaagcaatctgcagtgagtacaggatacacaatgctgatgtctcccttagatatgatgcaacagcagatgatctcatagatgtgattgagggaagcagaatttacatgccttgcatctatgttgttaataagattgatcagataacacttgaagagctggaaatcttggataaacttccccactactgcccaattagtgctcatcttgagtggaatctcgatggtcttctagagatgatctgggaatacctggatttggttaggatatacacaaaaccgaaaggtttaaacccagattatgaggaccctgtaatcgtatcctctaagaagaaaacagtggaagacttctgcaacagaatccacaaggacatggtgaaacaatttaaatatgcattggtgtggggttctagcgtgaagcataagcctcagagagttggcaaggaacatgagcttgaggatgaggacgttgtccagatcatcaagaaagtttag</cdnaseq>

Protein Sequence

<aaseq>MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLT PTSKGGGGGAGEGFDVTKSGDARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTC IPGVIMYKGAKIQLLDLPGIIEGAKDGKGRGRQVISTARTCNVILIVLDAIKPITHKR LIEKELEGFGIRLNKTPPNLTFRRKDKGGINFTSTVTNTNLDLETVKAICSEYRIHNA DVSLRYDATADDLIDVIEGSRIYMPCIYVVNKIDQITLEELEILDKLPHYCPISAHLE WNLDGLLEMIWEYLDLVRIYTKPKGLNPDYEDPVIVSSKKKTVEDFCNRIHKDMVKQF KYALVWGSSVKHKPQRVGKEHELEDEDVVQIIKKV</aaseq>

Gene Sequence

<dnaseqindica>4766..4816#4620..4671#4345..4536#3949..4248#3223..3332#2393..2452#2242..2313#1800..1976#1250..1303#122..163#tccgcctctcctctcttcctccccacctccgtctcctctcttccgcaccggcgaatccccaggcgagccttctagaaccttcgattgctcgggcgggcctcctcctccgcgagccgcagccatggcgaccgtcatgcagaagatcaaggacatcgaggacgaggtaacgagctccccttctctagggccggcgtgccccgccccgccgccctccgacgatccgtagctgtcgcggatagatttgctgctctcgagggtagtagtggttggggttgcggttttggttgcttcgtctcgagctgaattggtttgatgctgctttgtgatggcgtgatgtgtgctagttttggtggtttggacggtagattaggtcagggaagctatggctcgtgggttggaagcagcatgtcatgatttttttttttagtattagttcagaactgttaggttttaactgcgagcggcatgcgatgtagtgggcttgtggctttgagctgctctaattcaatgaaatgttactgttcatacacttgtgcttggtgaaggtcggagataagttagacttggggcagcattccagtctcgaggctgggctaatatcattttcttacctagtttatattcatatggttttgggattttttttgtcttattattggttgtaatttggagtattgctggatctaatagacacattttgagggtattagtgatttgaaatgttggaggttgttgtgtcgtcaatttgaatatgatggtggaaccctgtatatctgtttcttcattagttatgattgagaattcagagattctgtaactgttgttggaatgtagctaggactagggtattgaatgttttgtgtggtcaataatggtaagagtacgggaaatcgatgatatttcatgagtcatttttctgttgtgattcagtggtcttttgtcaaaggctgcatactgcaggtgcaagtgcatagattgctttagttgcatcttgcatttgcatggtgatgatttagtaccatagtacctttctagttatacatatagttgttatcttggttcataattagcaacagtaacattttttttatcatgagcaacactaccataactgttatgccatttgagaaaccgagaattgaataactggaaaaatggataggaacatctctaatagtaaacgaaacagctgatgcttccactttctaatccctttgctgatgttcgtggcttttctttgacttgatagatggcaaggacgcagaagaacaaggccactgcacaccatcttggtcttctgaaggtaatgtgaactccgtccatctttaatttaaaatgctagtagtatgtctgctgttgtattaaaatcctaagaaattggcccataggcagattagctatttctggttcacaataagttatgccttcatgcttctgagtatatcttgcctacttcatgatcaaacgtatgcatctgctgaattccgttagttcaattaaatcagtagcatggttatcttacctttccctgcgcatgaaccttagtataaaactgctgtatcaggttctattccattccacaataatatgtgtcactttggtaagagtttgcatttaaggtaaaaagtgcttgaaaggatggtcataagttccatcctcaggacctagacaaattatttcattgttctctgtgttaatttcacatattcttgctactagaacctgtgtactttttgtttagtttaatctgccacttctacaaattattgtctttttcctaactgttttcctcttatcaggctaaacttgcaaaattacgccgtgagttgctgactcctacatccaaaggtggtggtggcggtgctggcgagggatttgatgtgacaaaaagtggagatgcacgtgttggtttggtgggctttccttcagttggaaaatcaacattgttgaacaagctgacaggaacattttcagaggtgctgtacgaatgctatctacatattcatttacgaggatcttcccccacttagttgagcaccctttgtattagataaacgcacacacacatttttatgcctctactgtgtccgtcttttattcatcaatttcatggatatgtttaagtagttttcatagttggatattccaagtggccaagtcggtttttcctacaactattgccgagtttgtatgctataatggcgtggtcttatgaacctgtccctgttgttgattcaacaggttgcagcctacgaattcacaactttaacatgtattcctggagttataatgtacaaaggggctaaaatccaggtaattatttactctcataaagtaagatacatgcctgagtttatccgctcttggttgataactagcctttctttttcagcttttagatcttccaggaatcattgagggtgctaaagatggaaagggtagaggaaggcaggtaatatgtcctgctctcacagttttgaattggtactaatgctattggatttgtatattcttttgcactgtgtaaacatttgtttttctgactctctttgtttaaaattgccatgagtcatatggtatatatgaacaatttattgtttgcaagatttcttatgcaacctttataggaatcacctgactacttcagcacttgtctcttgtataaatcatctaggcagctgcatgtactcacagaagtgcactgtcacttctcatgataatatttgtttaaaaagagggaaatatgttctgtataatagtaacattttatcaattggtatgtgatttccactttctggttaacaatgcagaacttccttaaatgtatatgtgatggaaatcagactagttgttagatatgctcttgaatgttttgaaggctgaatgagcttttcatcttgaacatgcaatactgcaatttaagtgaacattatctgtaccatgcatgttgaagttatctaacttttgcacgcctaacaatgtggcagcaaggttctatttatccttttaatttaatgacactgtgtttcactaagaaaaaatcagtatttttttaggagacaagtctcacatgctttagatatcctcacatcgaacccaaggacttctctccctatatcaaatagtaatattatatgcaataattaagcatatttttgttgtttgtcaggaagttatgctgttttcccttctagtctgatagatagcttacatgtttttcaggttatcagcacagcaaggacatgcaatgtcattctgattgttcttgatgccattaagccaataacccacaagcggcttattgagaaggagcttgagggatttggcattaggtatgttttgactttcttttgggtagaagatgtttcagcggtgtttgccatactatacaaaacttgctaagggtgcgttcggcggtgagagttcccaactttactctctcgttttcagcgcgcacgtttctcgaactgctaaacggtgtgttctttgcaaaagaaaaatatgtaggaaagttgctttaaaaaatcatattaatctatttttaaagcatttttaagctgaaactcaattaattatgtgctaataatccttcacttagttttccgtgctgggaggcaatgttgggaatcttgcctcccgaactcaagcctaaatagcttttgttttttcattcttttctgctcgcctctgtcaccatgagcacaaatagaatcaaacaaatttatatgacaccattcatcttagttttcgtcggtatgtcattcatccaattttatgaagagtaactgcgcctactggatcatgggaaactcaagaagtcaagatgctatgtccactcttgctcactacaagttcatttcactctcaagagttcttttaggccatgctatcttccctgctgaaagaaggctgatgtttaatcttcatgaaccctgtatcaaatgataggttgaacaagacaccccccaatttgacatttagaagaaaggacaagggtggcatcaattttacatcaactgtgacgaacacaaacttggatcttgaaacagtaaaagcaatctgcagtgagtacaggatacacaatgctgatgtctcccttagatatgatgcaacagcagatgatctcatagatgtgattgagggaagcagaatttacatgccttgcatctatgttgttaataagattgatcagataacacttgaagagctggaaatcttggataaacttccccactactgcccaattaggtgagaatttaattgacatcttttgttgtgctttattccattcattttgctccaacaagtaaagcagactctccctttccttttatttgtccacagtgctcatcttgagtggaatctcgatggtcttctagagatgatctgggaatacctggatttggttaggatatacacaaaaccgaaaggtttaaacccagattatgaggaccctgtaatcgtatcctctaagaagaaaacagtggaagacttctgcaacagaatccacaaggacatggtgaaacaatttaaatagtgagtatcttcatttgtatcttgtctgaatatttttgtccctgttatccatctgtgtggctaactgctcacaaaacctgcagtgcattggtgtggggttctagcgtgaagcataagcctcagagagttggcaaggtaggcattcttcaactactaccatgtttcgctgccatgatctatctttttttaggggatatctcctaatattaatttgggaggctttgtgcaggaacatgagcttgaggatgaggacgttgtccagatcatcaagaaagtttaggtatattgtagtggtcacgttctgcaaacctggaaggaggtatgagctatgagaattttgagaagcagtcacttttactgcgtgttattttgctagctatgatgcccatagatgattggctgttcccatgaacgtttcaatgcaatcaaaatgtagacggacagattttccttctgtcaagttagccttgtaattgtgatctttgtctgatcttcctgttgctatatatatggtgagtcaccgatgaacacagcagttgaacacatggaaagatgctttgcttatcttcagaaagatgaaagatgattcacatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0627800, RefSeq:Os07g0627800