Os07g0637000

From RiceWiki
Revision as of 08:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0637000| Description = Similar to CBL-interacting serine/threonine-protein kinase 1 (EC 2.7.1.37) (SOS2- like protein kinase PKS13) (SNF1-rel...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0637000

Description

Similar to CBL-interacting serine/threonine-protein kinase 1 (EC 2.7.1.37) (SOS2- like protein kinase PKS13) (SNF1-related kinase 3.16)

Version

NM_001066932.1 GI:115473596 GeneID:4344036

Length

4415 bp

Definition

Oryza sativa Japonica Group Os07g0637000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27124601..27129015

Sequence Coding Region

27124736..27124885,27124965..27125027,27126360..27126431,27126535..27126642,27126760..27126840
,27126913..27126966,27127063..27127188,27127275..27127484,27127598..27127699
,27127977..27128093,27128197..27128268,27128382..27128456,27128603..27128707

Expression

GEO Profiles:Os07g0637000

Genome Context

<gbrowseImage1> name=NC_008400:27124601..27129015 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27124601..27129015 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggatggggaagtacgagatggggcgggcgctgggagaggggcacttcggcaaggtgaagctggcgcgccacgccgacaccggcgccgccttcgccatcaagatcctcgaccgccaacgcatcctcgccatgaagatcgacgaacagataaagagggagatcgccacgttgaagctgctcaagcaccccaatgtcgtccgcctccacgaggtttcagctagcaaaaccaagatatacatggttcttgaatatgtaaatggaggagagctattcgacaaaattgcattaaagggtaagttgtcagagaaggaaggaagaaaactcttccagcagctgatggatgctgtaagctattgccatgagaagggagtttatcatagggaccttaagccggagaatgtcctagttgatgcaaaaggaaacataaaggtttcggattttggactaagtgcccttccacaaaatcaacggaaagatggattgttgcataccacatgtggcagccctaactacatcgcccctgaggtccttctcaacagaggttatgatggctctttgtccgacatatggtcttgtggggttatcctatatgtcatgcttacagggaatcttccatttgatgaccaaaatacggttgtcctttatcagaagattctgaagggggatgctcgtattcctaaatggctttccccaggtgcccaagatatactgcgaaaaatcttggatcctaacccaattacacgcttagatataactggaataagggcacatgagtggttcaggcaagattatactcctgctatgcctttcgatgatgatgacgacaacaatatcagtgatggcaacctacatatgactgagaatcaagatattgaaaccagcccagcaatcagccaaatcaatgcattccagctcattgggatgtcctcatgccttgatctatctggattttttgagaaagaagatgtttctgaaaggaaaatcagatttgtatcaaattattcccctacttctctatttgagaagattgagagcactgtcacagaaaagggtttccaggtacagaagaacagtggcaagctaaaagtgatccaagtttgtaaagaaccagcaaatccaagaggacatggaaatttattgatttctgctgaggtgtttgagatcaatgaatctctttatgttgttgagctaaaaaggtcatctggggattgttccctttacagacagctatgtgcgtcactttctgaagacttgggcatatgcaaaaggcaacagcttttgaagaaagattctatgagacaagacctttgtcgatataacagtagcttttga</cdnaseq>

Protein Sequence

<aaseq>MRMGKYEMGRALGEGHFGKVKLARHADTGAAFAIKILDRQRILA MKIDEQIKREIATLKLLKHPNVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGKLS EKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAKGNIKVSDFGLSALPQNQRKD GLLHTTCGSPNYIAPEVLLNRGYDGSLSDIWSCGVILYVMLTGNLPFDDQNTVVLYQK ILKGDARIPKWLSPGAQDILRKILDPNPITRLDITGIRAHEWFRQDYTPAMPFDDDDD NNISDGNLHMTENQDIETSPAISQINAFQLIGMSSCLDLSGFFEKEDVSERKIRFVSN YSPTSLFEKIESTVTEKGFQVQKNSGKLKVIQVCKEPANPRGHGNLLISAEVFEINES LYVVELKRSSGDCSLYRQLCASLSEDLGICKRQQLLKKDSMRQDLCRYNSSF</aaseq>

Gene Sequence

<dnaseqindica>136..285#365..427#1760..1831#1935..2042#2160..2240#2313..2366#2463..2588#2675..2884#2998..3099#3377..3493#3597..3668#3782..3856#4003..4107#acgcccttcctccaactccccccaaagccgccaccaaaccttctcttctcctctcctctcgcgagtgtcgaactccgccaccgcgcgcgcgcgcgccggagacggcggccctcccatccgcggcgggcgccggcaatgcggatggggaagtacgagatggggcgggcgctgggagaggggcacttcggcaaggtgaagctggcgcgccacgccgacaccggcgccgccttcgccatcaagatcctcgaccgccaacgcatcctcgccatgaagatcgacgaacaggtgaattaaccttgattgattgctcatccgggttcctgttcctttgcttggccggctggttaattaatttcttgctcagataaagagggagatcgccacgttgaagctgctcaagcaccccaatgtcgtccgcctccacgaggtgagcttcgcaacccacagagtttcagcagaaatcctttcttttgtgttttttttactctcttgctttcttcctcttgctgttcaacgcctcttgcgccattgatgttgccgtctgaactcctctccggctgcgatatagcactaattttttttttaacttggctgctaatacctctctttggataactctcccccttgtgtgcagtagaataattgtcctttttactgtttcttgacctggacatctgcataaacaattgagcacacgaaatgaccacccaatatgtttttttcctgctcatggaagtagtaggacaaggcaaagggtctttcagtttcagcaagcaatattatttccctttccttttactgcgctcttgcttctcggagtattttagtcgggtgatgatgcgcccgtgcagacttgggtttatcagattcccctgcagcaaaaacaaacttgggttgtcacgtcaaaccctgcgaatctcatcacggagaatcgcccactggagcattggaatacttgctgatgagatcatgtggctattaggagcaaggttcatgtgccatctgagccgtacaatctgatgatccgatggccgtcgttgctctacatgctctgaagcctgcctggttaagacccaatccagaagccaccaaaagagctttctgacgaggttggccgacatcacccaataatcagagcgatcttttactagtcacttttaggcaactttcagtcctgcaaggcagagaaaacacagaaaggctgcacgacatgagcccaccacagcaatacgtcatcatatctataatgcaattcagaagggaaagtgttaaacgtggttttggtaccatttttgtaagtgttaggttcaccgaatgattgcattagtggataaatgtccgtgagaggcttacttcttgcaagcggaagattagaaaatggagctcctgactctaaagcaaaaacatatgcgcaccagtgtgactgcccaatgatttggtactgcccaatgatttagtagagagagagagagagagagagagagagatgttgcggctgttgatcagatctctgcctcccgattgttcattaaaccttgtttctgtaggagatgcaattgacatcaagaattagctggggctaaattcctccagtgaaaaccttccccctatccgtccaaacctgattccctgaaacatggaattaatctttttattgttgcagtttcagaaatgtcaaaaagaaactacttttcagttgtacacatccacattttgtccttgggaagcctgagatagattactggtttttcccctgcaggtttcagctagcaaaaccaagatatacatggttcttgaatatgtaaatggaggagagctattcgacaaaattgtaaggattttgcttctcattttaagcatgcattaatgaatcaaaaacaactgattgtgattagggttttacacaactctaacaatctgttgatgcatgacaggcattaaagggtaagttgtcagagaaggaaggaagaaaactcttccagcagctgatggatgctgtaagctattgccatgagaagggagtttatcatagggaccttaaggtgactacacagtatcactgatctatctttttcatattttaattgtaagcaagaaaataaggactgatccaaatggaacacacgattaacatatgctattttctgtgtcttctgtagccggagaatgtcctagttgatgcaaaaggaaacataaaggtttcggattttggactaagtgcccttccacaaaatcaacgggtatggaattttctcttacatcaaatcagctgaataaattcgttggtgtctaaaataaggctccaatttcagaaagatggattgttgcataccacatgtggcagccctaactacatcgcccctgaggtaagaattaagcattcttaaactgaacctattattgtttcacggtctttagtttagtgcatatggaggatgtagttctgacagaggtatatacaggtccttctcaacagaggttatgatggctctttgtccgacatatggtcttgtggggttatcctatatgtcatgcttacagggaatcttccatttgatgaccaaaatacggttgtcctttatcagaaggtataaagcaaggaatcaaagattacctcagcaaaaatttggctaattttatttggctcaatatctcaatttaattttgtatccagattctgaagggggatgctcgtattcctaaatggctttccccaggtgcccaagatatactgcgaaaaatcttggatcctaacccaattacacgcttagatataactggaataagggcacatgagtggttcaggcaagattatactcctgctatgcctttcgatgatgatgacgacaacaatatcagtgatggcaacctacatatgactgaggtaacccaacgttaggtgtactttttgtttgccatataatccattgctttaactgaatggtatagattgaactcaatctgtgttctctctcgcttttttttttcatggtgaagaatcaagatattgaaaccagcccagcaatcagccaaatcaatgcattccagctcattgggatgtcctcatgccttgatctatctggattttttgagaaagaagtaagtttgatctttctttcttgaccctatttgctaattccttaactaacacctacattaaatcctagcctgctagccaaaacagacacacccaaaggtcaagtaggccgtaaatggaagggtcccatgtgaactcatcagaccataaatcatgaaataataagttagtgaccagcaatttgacaaagccatggattgttgtcttatatatccgatgtccctactgagacctctgctacgttaatgcccttaactcagacatgtgactttgttacaggatgtttctgaaaggaaaatcagatttgtatcaaattattcccctacttctctatttgagaagattgagagcactgtcacagaaaagggtttccaggtacagaagaacagtggcaaggttagtgacctcagatgtatctacctgtaatattaatatgagctatacttacactgctcatgcatagatgttaaactgaaacttatgctatcatgtactacagctaaaagtgatccaagtttgtaaagaaccagcaaatccaagaggacatggaaatttattgatttctgctgaggtacttctatcacattgaacatccatagcaataaataatcaatagtgtgcaatgtgccaatgtgtttctgttaaacatccatgattcttaatattgatgtactgcgttttcaggtgtttgagatcaatgaatctctttatgttgttgagctaaaaaggtcatctggggattgttccctttacagacaggtatttctccctcccttgctgaatcagtattttaattcattttctgatggaaaatttaaactaaattattttgtcctagagcattgttcttacttctcaaacttccaatatgcaatttaacatatatggtattgtttatgttgcagctatgtgcgtcactttctgaagacttgggcatatgcaaaaggcaacagcttttgaagaaagattctatgagacaagacctttgtcgatataacagtagcttttgataaaagggtctctctagcttttagttgtgaaggctctagcatttttaacaagagcccccaatacaacgacgtatgacacagttttgtaaaattaaactgtaaatacaaaacaatccaattgtacaccgaaaagagtataccgatcatccaagtatttcctttaggagttcattagtttgtgttctttttgcctttactggtaaatcgctacctcctgggcaaattggctactgacagtgtataaaagtatgatgtagacaatctaagtgtacataaatagttacctcatcttgtgttcctttgaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0637000, RefSeq:Os07g0637000