Os07g0639800

From RiceWiki
Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0639800| Description = Similar to Eukaryotic translation initiation factor 6 (Fragment)| Version = NM_001066952.1 GI:115473636 GeneID:434405...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0639800

Description

Similar to Eukaryotic translation initiation factor 6 (Fragment)

Version

NM_001066952.1 GI:115473636 GeneID:4344055

Length

2781 bp

Definition

Oryza sativa Japonica Group Os07g0639800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27288635..27291415

Sequence Coding Region

27288909..27288918,27289446..27289542,27289637..27289722,27289810..27289854,27290525..27290655
,27290753..27290863,27290952..27291209

Expression

GEO Profiles:Os07g0639800

Genome Context

<gbrowseImage1> name=NC_008400:27288635..27291415 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27288635..27291415 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctccaagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgcctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactagaataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccaccgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtattgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttacacaccctgacctcgacaaggccactgaggaacttattgcagatgtgcttggggttgaggtgttccggcagacaattgcaggaaacatccttgtgggaagctactgtgcgattacaaacaggggtggcctagtccatcctcatacatccattgaagatcttgatgagctgtccacgctcctgcaagtccctcttgttgctggaaccgtgaaccgaggcagcgaggtcattgctgcgggcatgacagtgaatgactggactgctttctgtggctcagacactacggctactgagctatcggtcattgagagcgtcttcaagctgagagaagggcagcctgccgcgattgttgatgacatgaggaagtctttgatcgacagttatgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELAD VIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDERLS ALGNCVACNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAITNRGGL VHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVI ESVFKLREGQPAAIVDDMRKSLIDSYV</aaseq>

Gene Sequence

<dnaseqindica>275..284#812..908#1003..1088#1176..1220#1891..2021#2119..2229#2318..2575#gcgagagagagaccattcccccccgtctcggcctcggaagtcgcgcgcacccccaaaccctagccgcgcctccacctcccgattcgccgccttttcgttccaggtaattggcagcggcgtggaaccgaatagtggatgcgtctatgctacccgattactccgtaatctctctcctttttttttggtggggggtaaatcatcttcggtgtttgatctgcaggtgtgtgttgattagtagaagagaagcggcggctgcgacgaggcggaatcgaccatggcgacccgtaagtttcagcatgtttgaggttttgcggctcgtggtttttgtgattaggtagctctatattcatttctgttagttacttcgatgagatattttgtagcgttggggattggcaacgacggattgggcgattagtactgttgggtgattagtcttgtggccagatgcctagatgagtagttttgtgactgaagcagcatcacagaatggatttcggggctagtcaagtgggtttaatgtttgttgagatttttctgaatgatcagtgtttagaatgtaatgtttttgaggacaaaagtggtagcttgttacggtagcttttagtaaaagatctttttcttagcatctcatttgttgttctatgctgaaatttctacacttaatcatgtgatgtagcgcacctctaatttggttggttaggtttcattgctcatactgggttctgaactggtgggtgatgtttgattcaaatgccttttacacatcttccgtatctaatctgctttttcttgaatacacgatctgtaggtattcagtttgagaacaattgtgaagttggtgttttctccaagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacaggtgcatattttgtcagtttaagatgttgggaaattatttgtggaagcgtgggaatgcctaactcataactgctgcattatttgttattttgcagtgcctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactagaataattggtcgtctctgtgtcggttagtacttgagcttggatatactaagtggattaatgcacttgccttcttgtttttcgtttaccaatttgaatctttgatgtccaggaaacaagaatggacttctcttgcctcacactaccaccgatcaaggtactctatttttgtatcttttctcctataaatctttgctgccatggctacatcgtttctgctagctctgtgctattgatgtcatccacatgttggctatatgtgtcaataaattagtaacttttcacatggatatagtttttcagtgtatgttctttagccacactccgtttttatggacttataggaaaacagaaaatcttttctaagctaaataatgtgtacatgtactgaaagaaaattttatctacctgatgattataggtactataattatcattgaaattactctataattattatcagagttacagttacttgggtattgcacagagggcaaagttgttaaggcaattatggacttacactgtctgccgcattattatttttcttttgtacgagcacaggcacatggcttgatagtgttgtagtatatttggaacttgttttcatgtaatatccaaggccttctggatattgtgactatctgctagacagatacaatcaatcatgccagttggatatacattccatgcttgtgttgtcgaattgattttccttagcagcttgattggtttatgatgctgtgttatgatattttgtcatggacaaaagtttcaccatgaatttgtagtaattctatgttccctgtgtgtttgaattgttctagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtattgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttacacaccctgacctcgacaaggtaagcctatcttcgtatatctctctagtgatgtttcttgacttaatgcttttccctattgtctcgaactaaatatgcctgctgctcaattctccaggccactgaggaacttattgcagatgtgcttggggttgaggtgttccggcagacaattgcaggaaacatccttgtgggaagctactgtgcgattacaaacaggggtggcctagtatgttttttctacttcatttctgttccattcgatctgtgtttgttacaaatgttctttttcttattgtacaacaattgcgaaacaggtccatcctcatacatccattgaagatcttgatgagctgtccacgctcctgcaagtccctcttgttgctggaaccgtgaaccgaggcagcgaggtcattgctgcgggcatgacagtgaatgactggactgctttctgtggctcagacactacggctactgagctatcggtcattgagagcgtcttcaagctgagagaagggcagcctgccgcgattgttgatgacatgaggaagtctttgatcgacagttatgtgtaaaagaccaaagttagtgaatgtgtggttgtgggagtattaactgtgctaaaatcgacacaaactgtactcgtgtaatcagtagcagaaacataccgtcctggtggtgaatttctgtcttctgaattacagacttatcttttacctttgtctccttgaagcctacaatatattttgcagcttaagatttattgattgagcaacacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0639800, RefSeq:Os07g0639800