Os07g0640900

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Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0640900| Description = Similar to Heat shock transcription factor 33 (Fragment)| Version = NM_001066959.1 GI:115473650 GeneID:4344063| Leng...")
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Gene Name

Os07g0640900

Description

Similar to Heat shock transcription factor 33 (Fragment)

Version

NM_001066959.1 GI:115473650 GeneID:4344063

Length

3191 bp

Definition

Oryza sativa Japonica Group Os07g0640900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27333820..27337010

Sequence Coding Region

27333915..27334193,27335859..27336512

Expression

GEO Profiles:Os07g0640900

Genome Context

<gbrowseImage1> name=NC_008400:27333820..27337010 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27333820..27337010 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttcttggtggagaggtgcggggagatggtggtgtcgatggagatggggccgcacggcggcggcggcgcggcggcggggaagccggtgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccacatcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgcccgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttcaggaagggagccaagcacctcctcgccgagattcaccggcggaagtcgtcgcagccgccgccgccgccgatgccgcaccaaccctaccaccaccaccaccacctcaatcccttctcgctgccgccgccgccgccggcgtaccaccaccaccatctaatccaagaagagcccgccacgacggcgcactgtactgtcgccggagacggcggcgaaggcggggacttcctggcggcgctgtcggaggacaaccggcagctgcggcggcgcaactcgctgctgctgtcggagctggcgcacatgaagaagctctacaacgacatcatctacttcctccagaaccacgtcgcgccggtcaccaccaccaccaccaccccctcgtcgacggccatggcggcggcgcaacaccaccttccagccgccgcctcctgcaggctgatggagctcgactcccccgatcactcgccgccgccgccgccgcccaagactccagcaaccgacggcggcgacacggtgaagctgttcggcgtgtcgctgcacggcaggaagaagcgggcgcaccgggacgacgacgacggcgtccatgaccagggaagcgaggtgtga</cdnaseq>

Protein Sequence

<aaseq>MAFLVERCGEMVVSMEMGPHGGGGAAAGKPVPAPFLTKTYQLVD DPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR WEFANEFFRKGAKHLLAEIHRRKSSQPPPPPMPHQPYHHHHHLNPFSLPPPPPAYHHH HLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELAHMKKLYNDII YFLQNHVAPVTTTTTTPSSTAMAAAQHHLPAAASCRLMELDSPDHSPPPPPPKTPATD GGDTVKLFGVSLHGRKKRAHRDDDDGVHDQGSEV</aaseq>

Gene Sequence

<dnaseqindica>96..374#2040..2693#gtgcgtctctctctgtctcactctctgtgtgagtgcgagacagtgagacactgcagcctttctcctctccccttcttcttcctcctcttctagctatggctttcttggtggagaggtgcggggagatggtggtgtcgatggagatggggccgcacggcggcggcggcgcggcggcggggaagccggtgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccacatcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgcccgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatgtaagctgctgctaccattgcacatttttgccacatatatattgttgctctataagaatccgtaattttcatgtcggtcaaaaacatgacggtggttgtgcatagccgccaaaaaaacatgtatatgcttggtagctggttagaaccgccaataatatatatgaacttggcggctgttttttttggccgccaagaaaattgcgggttcttgtagtgtcttgatttctttgcttgttcttgaatcgatctatagctagctatacatacatatatcagttggttttctagctgctatagtttcttgctttggttttaatttgatgtagaggtttggtcagtcagtgcatgggggatgctggcatgcatggactatggtttaatgttcttgttgttttgatgggtgatttggtgtgtatgtggtggttagcaagcttgtttcctagaatgtgacagggttttggaaaagtttttgttcatcgatcttttgttttgtaccagatttttgttgcacgctggaaaggcattgctgtttgagtgcgaccttccaacgagctgattaatctcttttgcttgtttttttcaaaaatatatttcttgcttctgatgaaaagatagagtagagctgggggtatattaattcgtgctgatgattaatctcatctactgtttttcttgtctgtttagcctggttaacatgagggagatttaaattttttttgtgcctcttttactgaacattatctgatgcacattaattagtttctctcaatggtgaagtgaggagcagcatgagagtacgtgctgactgtttgctgatcttctctttcttcttctgaaccactataagttgatgactgtgttgtacattcacttcttaccctacttgctccagcaccactgttctaccttccctaattaatgtacttcgctagtacttcctctaatcttccctttgcctcttgagtcttgaccaaaatcaaagtgcacaaattaaatgtgcaagcacagtaagcagtggattagtatttattagtacgtagtcgccgtagtagtagttaattctagctccatgaataatccatttacatgtatttatagtttgttctatcctcctcatctttagagaattagcagtgcactatccactcccaatcattgggaaaagtttgacacaataaacagagatgcatatatgtaccttggtattctgtgccaagtatatactccaccattcatattagcaccacttgacatgactagcaacaatattgaacatcagttaccatatactcctacatagtactgccttcattttacaaagatttcatctctgcctatcttttttttatggaggtagtagtatattttgccatttgccaattcttcttttctctctctctctctcttttttttgtgattgctagctccattggttgtgtgattgcttagtttttttagttattagctactaatacaatcacatattaatcatcttgttgattttttttctaaaattttataaccatttagatgacatgcaaacgattaggagatatcctctcgagtgttcataatcctttccctaatagctaatactaagtatgtatgtttaactttgggcattaattaattggtgttatgaacttatgatgatgttaattgcagggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttcaggaagggagccaagcacctcctcgccgagattcaccggcggaagtcgtcgcagccgccgccgccgccgatgccgcaccaaccctaccaccaccaccaccacctcaatcccttctcgctgccgccgccgccgccggcgtaccaccaccaccatctaatccaagaagagcccgccacgacggcgcactgtactgtcgccggagacggcggcgaaggcggggacttcctggcggcgctgtcggaggacaaccggcagctgcggcggcgcaactcgctgctgctgtcggagctggcgcacatgaagaagctctacaacgacatcatctacttcctccagaaccacgtcgcgccggtcaccaccaccaccaccaccccctcgtcgacggccatggcggcggcgcaacaccaccttccagccgccgcctcctgcaggctgatggagctcgactcccccgatcactcgccgccgccgccgccgcccaagactccagcaaccgacggcggcgacacggtgaagctgttcggcgtgtcgctgcacggcaggaagaagcgggcgcaccgggacgacgacgacggcgtccatgaccagggaagcgaggtgtgagcgagctttgcagccgccatgcttgctcgatctcgtgtacatatagagaagagaggatgatgatgagctagctcgatcgatcagctcagctcatgctgctgcttgatttcttgaggaggatgacgacgacgacgacgattgatttgcgcaagggtgcaggtgttaattagtttgttaattagtctttgagatgagatgacaagagttgattagcgttaaggtaggagtagctagctaggaggtaattaggatcaatcaaatcaattagtagctagctgctactgctagtgcttaattgcacttaggtagctcttgttttgttcttgcttattttgatcttgccatgcatcatgcatgccatgcatcatgtgagagagtactgatcacctttcatgctggtgaagagtgatgatcagatgaggaactagcttaattagctagctaagtggatgttaaatggtactaatgaagtccaaggcatctaagtttttgcacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0640900, RefSeq:Os07g0640900