Os07g0645400

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Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0645400| Description = Similar to NADH dehydrogenase| Version = NM_001066990.1 GI:115473712 GeneID:4344095| Length = 4001 bp| Definition =...")
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Gene Name

Os07g0645400

Description

Similar to NADH dehydrogenase

Version

NM_001066990.1 GI:115473712 GeneID:4344095

Length

4001 bp

Definition

Oryza sativa Japonica Group Os07g0645400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27573653..27577653

Sequence Coding Region

27573788..27573841,27575451..27576911

Expression

GEO Profiles:Os07g0645400

Genome Context

<gbrowseImage1> name=NC_008400:27573653..27577653 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27573653..27577653 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgcggcgagcgctgctcagatctgccgagatctcccccgatcgcaaggctgcacttgagtacctccattatctatcgagagcacagcctactcgttctctaacaggtgctggcctttattctgctggcaaatcattcagcactcaggctgctactacatcaagcacaccacaacctccaccaccacctccacctccggagaagactcactttggtgacctcaaagatgaggaccgcatttttaccaacctctatggtcagcatgaccctttcctgaaaggtgcaatgaagaggggtgactggcatagaaccaaggatttggtgcttaaaggggcagactggatagtgaatgaaatgaagaaatcgggacttcgagggcgtggaggtgcaggattcccttctgggcttaaatggtccttcatgccaaaggtatctgatggacgcccttcttatcttgttgttaatgctgatgagagtgagccaggaacttgcaaggacagagaaatcatgcgtcatgacccccacaagcttctggaaggctgtttgattgctggagttgggatgagggcatcggctgcttacatctacattagaggtgaatatgtgaatgagcgtctcaaccttttgaaagctcgggaggaagcatacgcagcaggtcttcttggtaagaatgcttgtggatctggttatgactttgatgtgcatatacattttggtgctggtgcctacatttgtggtgaagagactgccctactggaaagtctcgaaggcaagcaaggtaaaccaaggttgaagcctcctttccctgccaatgctggcctatatggctgccccacaactgtcacaaatgttgaaacagtggctgtgtctccaacaattctcaggcgtggtccagaatggtttgcaagctttggacgcaagaataactcgggaactaaactattctgtgtctcaggtcatgtgaacaaaccttgcactgtcgaggaggaaatgagcatacctcttaaggaattgattgaaaagcactgtggaggtgtgagaggaggatgggacaacctgcttgcaattattcctggtggttcatctgttcccttgttaccgaagcatatatgtgatgatgtgttgatggactatgatgcactcaaggctgtgcaatctggattgggtactgcagcagttattgtgatggacaagtccacagatgttgttgatgcaattgctaggctatcgtacttctacaagcatgagagttgtgggcagtgcacaccttgcagggagggaacagggtggctgtggatgatcatggagaggctcaaagtaggtaacgcgaagcttgaggagattgatatgcttcaggaggtcactaagcagattgaagggcatactatttgtgcccttggggatgctgctgcatggcctgtgcagggacttatcaggcacttcaggccagaactggaaaggagaatccgtgagcgagccgaaagggagctactggcagcttcggcttag</cdnaseq>

Protein Sequence

<aaseq>MALRRALLRSAEISPDRKAALEYLHYLSRAQPTRSLTGAGLYSA GKSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGD WHRTKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADE SEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLLKAREEAY AAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGL YGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS IPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGT AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLAASA</aaseq>

Gene Sequence

<dnaseqindica>136..189#1799..3259#ggagctcacccacgcacgcagccgtctcgtctcccttcttctctctcctctcctctcttctccggcacaccacaccccaatcctcccccgatctccccaatccgagagctccggaggagcagcgcggaggcggagatggcgctgcggcgagcgctgctcagatctgccgagatctcccccgatcgcaaggtccgaatccccgcccttctccactctcctccttcccccccatctctctccggtctggatcccccaaccacgaggggcgcgaacgctgttaccgcctttgcgagaatctgagaggagtgcgcgtagcgggtttgagctgtgggagggtggaggagggtttgcaccagtcgatgtgtgttggtggtgcgcgcatggcgacgaatctcttcttcttccgggagtagaggataggtcgaggggagaggagtaaccgatgtagagcatggaatgccgatggacagttaggaggggctccatgtccgtctcttttgcatttcgtattagttctgtagggatttctggctgtaaagtgtttacgacttgatgcttaggatcgagtttcagtttgttgcggatgtggtttcttgttatgtcgtggatactcggagcatgccgtaaattgcttggataggccattcaaaatctcatttgtgaaaaccgaaaatgaccatgcagttgcagactagttactacctctttgtattcggtattgctgatgaaaacatgtgctacactcctttgcttgattgaaatagagaacaataattcaaaagctcgtttttgaactgaagatgaccattcagttacaggcttgttgctacctctttgtattcaatattgctgatgaaaacatgtgctgcactcctttacttgattgaaacgcgaaacgatctttactctttctactatattagtgtttccctgatgccccgagcggaataccagtattgtggttatcttatttcaatagattaaacaaacatggtgcatttatgaatatgctacattctgtagggatataaatgtgtttgatattggtatttcgtggcttctcctttgggtacaactaagaacacaacaaatgatacttcacctcaaagtgatactatcttttatgcctttcgtaggcttacttagtttttactttgcatataaaaccactactacaaataggaaaatcgtattgcagatactgaaaacctgtcctttatcaggacaggtatgctctatgctgcaatgagattatcaaaaacaccaacttgctgccaactgagcatttgatcttttctcttgttacttagatacttctaaaataatgctccaacattgtaggcacctgctgggcttatatataattcatgtttcacttatgggctgatatatttgaacttgatgtatttattttggtttctaaatctgcaaaattgttcccattctattcgttgatttaccatttacctgcagcagcaagtttgagttgaaagtagagatccttgtcaccatgttctaattactctattctagttcacttaactagttaaaaactgaaggcaagagcatcagaattctgtatttctgatcatttcttgatgttcatgttgttcttaattttgcttctttcaacacttgcttggatacttagtcagctttcaaatgaagattactttagtcttttgcttttgacaagtattggcgtattgtagtaaagtaactacaaacttttttttgtcctgaatcacatctcatggatcaagctgtgataacaaattggttttttttttcttgtcaggctgcacttgagtacctccattatctatcgagagcacagcctactcgttctctaacaggtgctggcctttattctgctggcaaatcattcagcactcaggctgctactacatcaagcacaccacaacctccaccaccacctccacctccggagaagactcactttggtgacctcaaagatgaggaccgcatttttaccaacctctatggtcagcatgaccctttcctgaaaggtgcaatgaagaggggtgactggcatagaaccaaggatttggtgcttaaaggggcagactggatagtgaatgaaatgaagaaatcgggacttcgagggcgtggaggtgcaggattcccttctgggcttaaatggtccttcatgccaaaggtatctgatggacgcccttcttatcttgttgttaatgctgatgagagtgagccaggaacttgcaaggacagagaaatcatgcgtcatgacccccacaagcttctggaaggctgtttgattgctggagttgggatgagggcatcggctgcttacatctacattagaggtgaatatgtgaatgagcgtctcaaccttttgaaagctcgggaggaagcatacgcagcaggtcttcttggtaagaatgcttgtggatctggttatgactttgatgtgcatatacattttggtgctggtgcctacatttgtggtgaagagactgccctactggaaagtctcgaaggcaagcaaggtaaaccaaggttgaagcctcctttccctgccaatgctggcctatatggctgccccacaactgtcacaaatgttgaaacagtggctgtgtctccaacaattctcaggcgtggtccagaatggtttgcaagctttggacgcaagaataactcgggaactaaactattctgtgtctcaggtcatgtgaacaaaccttgcactgtcgaggaggaaatgagcatacctcttaaggaattgattgaaaagcactgtggaggtgtgagaggaggatgggacaacctgcttgcaattattcctggtggttcatctgttcccttgttaccgaagcatatatgtgatgatgtgttgatggactatgatgcactcaaggctgtgcaatctggattgggtactgcagcagttattgtgatggacaagtccacagatgttgttgatgcaattgctaggctatcgtacttctacaagcatgagagttgtgggcagtgcacaccttgcagggagggaacagggtggctgtggatgatcatggagaggctcaaagtaggtaacgcgaagcttgaggagattgatatgcttcaggaggtcactaagcagattgaagggcatactatttgtgcccttggggatgctgctgcatggcctgtgcagggacttatcaggcacttcaggccagaactggaaaggagaatccgtgagcgagccgaaagggagctactggcagcttcggcttaggacactgtcaatgacgatcctgcactagtttcctgatttctttcacagaaataatgcaaactgatggagctcatctctgtatacgaaatgcagctcccctgatttgtttaaacctttatgtggatgtttatttaatgcactcagaagctggtgaattttgatggactgatgaaaacttttttaagtagaaacaaaatgcagttactgtaccatgtatgtcacatgagccagcaaaatatgatggtggatgtggacgtgtaccctgcttgtttttttttcactgttaaactatgcattgtttgaaattgtctagagttcgtgtgagctggttgaaaccatgtctacatctggggcctatgtttgcatctaatgagccagcataatctcatctgcatggcatattgttgatctgcatacttctatagggccaccggccctggcatgcatctgttcgtgattaaccaccggatgcttcatggtggttgggatatctacaaatgtattctggacctgtgtttattgtactgtttggtacagcacgtatccatcagctggtatgccgtgccgtatccagtagttgccaccgtcagatatctctggaatagttgggcttgccggttactgttcttccattttgtctccaggaatctgaatttgcaatggaacagttgagttgactgtgtccagaagatgtgtaataccaaactattttataatctctgttaagtaaaacatgagcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0645400, RefSeq:Os07g0645400