Os07g0646100

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Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0646100| Description = Protein phosphatase 2C family protein| Version = NM_001066995.2 GI:297607706 GeneID:4344100| Length = 3938 bp| Defi...")
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Gene Name

Os07g0646100

Description

Protein phosphatase 2C family protein

Version

NM_001066995.2 GI:297607706 GeneID:4344100

Length

3938 bp

Definition

Oryza sativa Japonica Group Os07g0646100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27623270..27627207

Sequence Coding Region

27623270..27623421,27623662..27623947,27624039..27624170,27625602..27625726,27625851..27625950
,27626296..27627207

Expression

GEO Profiles:Os07g0646100

Genome Context

<gbrowseImage1> name=NC_008400:27623270..27627207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27623270..27627207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgcgcaggggaagtgctgcgtgccgcggcggcagaggggacgcggcggcggcggggcggtgggtgggcgcggcggcgcgacgctggggcgggtggcggtgccgggggcggggctggtgctggagtacgcgacgctggcggtggcggggctgtacccggactcgcccgggagggagtcgcaggacgcgcacctggtggcgacgcggttcgcggggcaccccgacctccacctgttcgcggtgttcgacgggcacggcgcgtgcggcgccgcgtgcgccgggttcgcgcgcgacgcgctcccgcggctgctcgcgggggtgggggtgggggcgggggaggagggaggggggaggatggtggtggtggaggaccccgcggcggcgttccgggaggcgctcccggcggcgaacgcggagatgcacgcggcggacgaggtggacgactcgatgagcgggaccaccgccgtggcggcgctggtggcggggggtgcgctccacgtggccaacgtgggggactcacgcgccgtggccggggtttggcgcgaggggcgcgtggcggcggaggagctctcgtgggaccagacgccgttccgcgccgacgagcgcgcccgcgtgaaggcgtgcggcgcgcgggtgatgtcggtcgagcaggtggagggcgtgcgcgacccggaggcggagagctgggtcgccgacgagggggacccacctcgcgtgtgggcgcgcgacgggctctaccccggcacggccttcacgcgcagcctcggcgaccaagccgccgaggctgttggtgtcatcgccgaacctgaggtgaaaagtgtagagatcactccagcccacctattcttcgtcgtcgcaagcgatggcgtgtttgagtttctctccagccaggatgtcgtggacatgaacttgatgcagtgtgtcaacttgtcagcctttggcttatatgaagcatccgatgttccaagaactggtgttgcagctaagcttatgaaatgtttgaatgaaaatgggataagcccagcctctacatccaaactagatgtacacagccaaaaacccaaccagagtatgactttggcatatgttctgttcaggggaagcatgaaattgctccagtgggacacagaagtggctgcatatgaagatccccgggaagcttgctcagcaattgctgcagagtcgtacaaactatggctggagcatgaaaacaggacggatgacattacgataatcattgtgcacatccgggattccgaaaatccaggtcctgcagggagccagaaaatgaacggcagcagctcgggagcggtgcaaccagagctaactgtatttgtaccgtcagaagctagccatctgaacagagatgctgctactgaaatgccgtcgtcctcttcaggctctccaacagaacaacacctctcctgcgtcgctccttctccgactcaccctctgcttggagttgggagaacatcagaaacccccaagctgatagaaagcgagagagctatgtcgcaaccagcggaagcatcatggcatcaaagggatgataaattcttatacagaaagcggattccttctgcagggagctgttgctgtgcgatggctgtggtgctggctttgcagagtgtccgtcatgcaccggtggcaaatcctctcggtgctgttgctcgtgtttttcttagagcacctgctgactga</cdnaseq>

Protein Sequence

<aaseq>MGCAQGKCCVPRRQRGRGGGGAVGGRGGATLGRVAVPGAGLVLE YATLAVAGLYPDSPGRESQDAHLVATRFAGHPDLHLFAVFDGHGACGAACAGFARDAL PRLLAGVGVGAGEEGGGRMVVVEDPAAAFREALPAANAEMHAADEVDDSMSGTTAVAA LVAGGALHVANVGDSRAVAGVWREGRVAAEELSWDQTPFRADERARVKACGARVMSVE QVEGVRDPEAESWVADEGDPPRVWARDGLYPGTAFTRSLGDQAAEAVGVIAEPEVKSV EITPAHLFFVVASDGVFEFLSSQDVVDMNLMQCVNLSAFGLYEASDVPRTGVAAKLMK CLNENGISPASTSKLDVHSQKPNQSMTLAYVLFRGSMKLLQWDTEVAAYEDPREACSA IAAESYKLWLEHENRTDDITIIIVHIRDSENPGPAGSQKMNGSSSGAVQPELTVFVPS EASHLNRDAATEMPSSSSGSPTEQHLSCVAPSPTHPLLGVGRTSETPKLIESERAMSQ PAEASWHQRDDKFLYRKRIPSAGSCCCAMAVVLALQSVRHAPVANPLGAVARVFLRAP AD</aaseq>

Gene Sequence

<dnaseqindica>3787..3938#3261..3546#3038..3169#1482..1606#1258..1357#1..912#atggggtgcgcgcaggggaagtgctgcgtgccgcggcggcagaggggacgcggcggcggcggggcggtgggtgggcgcggcggcgcgacgctggggcgggtggcggtgccgggggcggggctggtgctggagtacgcgacgctggcggtggcggggctgtacccggactcgcccgggagggagtcgcaggacgcgcacctggtggcgacgcggttcgcggggcaccccgacctccacctgttcgcggtgttcgacgggcacggcgcgtgcggcgccgcgtgcgccgggttcgcgcgcgacgcgctcccgcggctgctcgcgggggtgggggtgggggcgggggaggagggaggggggaggatggtggtggtggaggaccccgcggcggcgttccgggaggcgctcccggcggcgaacgcggagatgcacgcggcggacgaggtggacgactcgatgagcgggaccaccgccgtggcggcgctggtggcggggggtgcgctccacgtggccaacgtgggggactcacgcgccgtggccggggtttggcgcgaggggcgcgtggcggcggaggagctctcgtgggaccagacgccgttccgcgccgacgagcgcgcccgcgtgaaggcgtgcggcgcgcgggtgatgtcggtcgagcaggtggagggcgtgcgcgacccggaggcggagagctgggtcgccgacgagggggacccacctcgcgtgtgggcgcgcgacgggctctaccccggcacggccttcacgcgcagcctcggcgaccaagccgccgaggctgttggtgtcatcgccgaacctgaggtgaaaagtgtagagatcactccagcccacctattcttcgtcgtcgcaagcgatggcgtgtttgagtttctctccagccaggatgtcgtggacatggtgatttccccctctctctccactctaattcatgcccataatattttctgaaccaatccatttcgatgtttgttttgcacacataggataccagtgaactgtggtgtggtgagtggtgactcaggtagtaattagtatttagccagtgcatttgcttcatggaaactggactcttcttggtgcagagcttcattttgggaatagacgagatataatattgaaatatttttactccactgcactgctcaccatgaattcatcactaccacacatagttaactagccaacatggttgataatggaagtaaaagatttttttgcttcttccttttcttctttctggagaacttgatgcagtgtgtcaacttgtcagcctttggcttatatgaagcatccgatgttccaagaactggtgttgcagctaagcttatgaaatgtttgaatggtataagatattctagaacagcccttgcagtgtgatttatattctgcatgtgtgagttaataggtttcatccagtgtgtcattctggagacatttaaacccaaccagaggttttttttttttagaaaatgggataagcccagcctctacatccaaactagatgtacacagccaaaaacccaaccagagtatgactttggcatatgttctgttcaggggaagcatgaaattgctccagtgggacacagaagtaagcttaatgcttaatgcttttgttaagatcaccaatacaaagacaaagtggtatatgttagttccaattaggattttgatgagcatagtgttgcatgctagggtgcgcaaaacctctatgtaccgtgatgtttattccctgtggattacggaacatcatcaacgtttcacggattacagtgaaggggaggttatctgtggagtcatctagttatgttaggatgcgagcttagtacatgcgatatcacgatttatggtgagatggatattaatggttgctaacaagttacagttagcctactagctgcactcgtggatttgaataggccaattttggtcatggatatacatttttgctccatctgttgttgcataaatgcatgtaaaaataatccatcaacctttagctttgtcaaaaaagttggaactgcaggaaggtgtaatgattacaaaatggtttgggttttgaggttgattgatgttggcatcatgaaagctgtcactctgaataaagttatgcataagtggatgtactttctattgagtagtagaagaatagtggattagcgtttgatttgtaacagcaaattgactaatcggaagtctgaccggaaacgaggggcatgataggtaaaccactgtaagaacatctcaaaatgggctgtgtgaatcaggaataatctaacacttttccaaaagtattgctgatggaaacatcttattggactcaaaactgaaatgtcactttagaattgactgctgattgctagttcactacggatgtgcctgcatgctgtcaaatgtgttttgattaggccctaacatggagtggtgtttataatgggcggtcccctcatgaacctcttttccttcccaccactttccttaaatgaatgtgctacaactacgtgtgtaaggaagccaggctggtaacagccttttttgctttccatggcttatttcatttacattgttttctaccttttgccttgcactgtgaatatctacatagaaagtgcatgacttttcagtattggatcagtcagaatatatgttatcctatttttttgaactgtgtaaatgcctataatactattaacagaaggctagaagggactactatgttttctctcaaaggcctataaattaccctatcaatcagggaaaagagatatatatgatgttgatcatggcgggtttagattataatggtgtagattggctacttgtgattgtatgttgccttttgttactattaaagtaatgtgataatgaactattgtttttatgccttgtacccatcaccatgcaaatttgagtaacaatttcatgttgaattgtatgtgcttttgattacttggttgaccttgatattctctctattgactgcatgccactaattgcgaacctccttttctgatcccaacaggtggctgcatatgaagatccccgggaagcttgctcagcaattgctgcagagtcgtacaaactatggctggagcatgaaaacaggacggatgacattacgataatcattgtgcacatccgggattccgaaaatgttggtgcacaacattcaaatttctttaggcataaaaccacactattaattggcctgcagagatttattgttctttcctaaatttactcagccaggtcctgcagggagccagaaaatgaacggcagcagctcgggagcggtgcaaccagagctaactgtatttgtaccgtcagaagctagccatctgaacagagatgctgctactgaaatgccgtcgtcctcttcaggctctccaacagaacaacacctctcctgcgtcgctccttctccgactcaccctctgcttggagttgggagaacatcagaaacccccaagctgatagaaagcgagagagctatgtcgcaaccagcggaagcatcatggcatcaaagggatggtgttgtcaacatggatcgatcagtgcagcgcagcatcccaacagcctcctgctaaacttgatgaggtaaaactgtcaatcttgtcatcgatgaatcgagtgaatgcaaacaaactctcatcggttcatctgttgctttacagtatctaaacttaaatgacacaagaaaagcagcatgataccacatcactgtcctccgtaagatcttttgccctaatcaatattttgtcgaattttcagataaattcttatacagaaagcggattccttctgcagggagctgttgctgtgcgatggctgtggtgctggctttgcagagtgtccgtcatgcaccggtggcaaatcctctcggtgctgttgctcgtgtttttcttagagcacctgctgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0646100, RefSeq:Os07g0646100