Os07g0646600

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Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0646600| Description = Conserved hypothetical protein| Version = NM_001066999.1 GI:115473730 GeneID:4344104| Length = 5459 bp| Definition ...")
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Gene Name

Os07g0646600

Description

Conserved hypothetical protein

Version

NM_001066999.1 GI:115473730 GeneID:4344104

Length

5459 bp

Definition

Oryza sativa Japonica Group Os07g0646600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27655232..27660690

Sequence Coding Region

27655536..27656114,27658327..27658565,27659628..27660055,27660465..27660643

Expression

GEO Profiles:Os07g0646600

Genome Context

<gbrowseImage1> name=NC_008400:27655232..27660690 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27655232..27660690 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaattctccgccgctttccgcgtctgctccgacgctctaacgccgccgcccgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgctggtggtcaccattgcttgctcgaggaggacctgtcgtccgtcgtgtttcccgatttccttgggaacctcggaacatgaccaccatcagtcgagtaaaaggcgacgagtcatacaggcgacttccatcccaggaaaagaagcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggctagagctggagatgagaaaagtaatagagatgcggcgtcctcagaggtttcatacatcaaatacgatgtactggggcaaagtgcgaagcaggatggctgtgatgaggatgatcgaaggagtgaaacggaggaacatgttgaggaggacgaagttcttgatcctgaagaatatactgtgaacaacatacttccaaaaagtagacaccgtgatggctctatatatagggacatcatggacacaccgtggaaaagggagtttcatattgcagaccgtaatgagactcggttggaggcaatgaggttttcgaatcccacaaattgtgtcattcgcagtaatggaacttgcatgtcacatgttcattgcaacatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgtagcagggatgatcccatcattgtggagcagggttcgctcatcaacatggaaggccctaaccgaggaatagacatgatggactatgctctaattgaatatgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggctctggaggcctatggaatcggccagaaacaatttgcattcctggcgattacggtgcagttgacataactttatcacgttttaattgttcagctgaggccaccgtagagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtgacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtgatttaaagaggtcggtggttgctgtaacgagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagaaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggacgagtgatacctctgtttctgtaa</cdnaseq>

Protein Sequence

<aaseq>MRILRRFPRLLRRSNAAARSPAPMHRLISSPSLMASAAASWCWW SPLLARGGPVVRRVSRFPWEPRNMTTISRVKGDESYRRLPSQEKKHTAITQGMKTIDT RGTILEARAGDEKSNRDAASSEVSYIKYDVLGQSAKQDGCDEDDRRSETEEHVEEDEV LDPEEYTVNNILPKSRHRDGSIYRDIMDTPWKREFHIADRNETRLEAMRFSNPTNCVI RSNGTCMSHVHCNMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDD PIIVEQGSLINMEGPNRGIDMMDYALIEYDMRIKTGEQEKDDLQLIDGASMIGSGGLW NRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSFNLLLGCLTSDLDKEIRL FDGVISESRDLKRSVVAVTRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKT DFALISVKVTWSALLSGRVIPLFL</aaseq>

Gene Sequence

<dnaseqindica>4577..5155#2126..2364#636..1063#48..226#acgcagccacagcacggctattccccctaacccccgccgccgcccagatgcgaattctccgccgctttccgcgtctgctccgacgctctaacgccgccgcccgatctcctgccccgatgcaccgcctcatctcttctccctctctcatggcatctgcagcggctagctggtgctggtggtcaccattgcttgctcgaggaggacctgtcgtccgtcgtgtttcccggtgtgttttcttgtgctgatcgatgctaaagtctgcgcctttacttggttattactacagttttggcatgattttcatagacagattttttgggcatgtgttttttttccttgttctgatgctaaagtttgcgtcttttgccacagtttttggatctgcgatcaactttgggttttgttttcctcgcaaaaaaaaaaaaactttgggttttgttttcatttgtttgaaggtagttgtggaaaataagtttctttaaactaattcgaaacaaagacaaaggagatcgagaaaaaaaatttagaaatcgattatcgatttcagggttagatgatctcaatcctgactgatggtaccgtcttatttattttagttgttgatattggtttttcattctcttaattaatgatagatttccttgggaacctcggaacatgaccaccatcagtcgagtaaaaggcgacgagtcatacaggcgacttccatcccaggaaaagaagcatactgcgatcactcaaggtatgaaaaccattgacaccaggggcacaatcttggaggctagagctggagatgagaaaagtaatagagatgcggcgtcctcagaggtttcatacatcaaatacgatgtactggggcaaagtgcgaagcaggatggctgtgatgaggatgatcgaaggagtgaaacggaggaacatgttgaggaggacgaagttcttgatcctgaagaatatactgtgaacaacatacttccaaaaagtagacaccgtgatggctctatatatagggacatcatggacacaccgtggaaaagggagtttcatattgcagaccgtaatgagagtaagctatcttttctctatctttatttgctatattattttttattagagataatttgtttccttgaacataacgaatctctttccatatctataaatattttattgcgatcctagagatcattgtatatgtggtgctatgcagcactgccataattttacccgccttacactcttttcagctatgagataattgtactggaggtccttaaacgtggatgagagtaacacttccaccccaagccttgtactttacttttactggcccttcagcttagcaccatttgcatacatagcaatctgcgccacagcctgatgggagggactgaggttgcatgcagagttctgatgacatggactaggaccttattccatgccatttaattacataaatgtccaaagtactttatccctgaactttgcaacacggtgatcacacagcctttgagcatgtatttcaatagcagaatacacaagaaaatgacaactataagtgcaaataataatctaaatatcgcatccacactgttgtaattgccattaggtttaaattctccatacatgcagccacaaactgtcagtaatagtacaagttttccaagcatgcagggagcaacaacaagcaataatagaaagtactcaggcagttcacatactatatataacctaaaggactactaggtgttcaaggggccaaccaaacattcaaatgcccctgtttaatatgaggagcgggttgccagtttccaaaatatagaccacttcccaaaacacgtggttttctgtagaggtaaaaggctggtacaggaaagaatatacctggctttctgaagaggtagtctgcccttgagttttttttttcttgtagttgatactaggatagatgttgctctcctagtaaaaagaacataggttgtttctactttgtagatgaaaaggaaaaaaaaatccaataaggccatataatcatcaaatatcacatgtacttttcaaatgtcaagtgtttgttcactgtattaatttccggtcacaaacttacattatgactttactttttttgaagctcggttggaggcaatgaggttttcgaatcccacaaattgtgtcattcgcagtaatggaacttgcatgtcacatgttcattgcaacatgctgcaaattttatcattggagttggctaaaattacactggatggtggttcagtagagttgtatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgtagcagggatgatcccatcattgtggagcaggtacacatccgacttatctagaaatatcattgtgtattttgatttggaaaattcatacttcatgagttttggcaaaaatcgtcaaattattggtactcgaattacttttaagatgttaattttattgcaattggtgatatattgatagagaaattaaaggtcaaaattctacttttcaagaatttctccttccaaaacgcaccttacatagggagtgtactctatattatgaaatgatgatttactatgagaacaggtttaaattatgaaactaaggaacacatgtattccaaagaaaaatcatgttaaatagttttggacactttgttgttgcttagtaccctacataatttttttttcttttgtttgatacatgatgaagatcttggtagttgtaaaaagagtaaaatacaccaccggtccttaaagttggagcgtggtgtcacttaggtccatgatcttgtaaaatcgatattaaggtccatgaacttgtttaagtgaatcatagcagtacaaaacacgtctgactgggttgaccgtcctacgtggcagtccagcgtggctccatatttgcaattaggccctccacgcccgatccacggccttcacggtgtcggagatgtggttcttgccgatgaccgacgtaacggcctcccgcaccttagcgagcacctatgcgagtgcctcccggatcttcatcatcgtttcgcccggcaccgctgccgccaccgccggcacgcgctgtgccacgacctccttccgccactgcactatgccgaagatcgcctcgctgagcacgcggtcctcatcgccccgacggagcatgtcggcgatttagccggtgaccgtcgcccccttgtcctgttgctgcccggtcgctggctcgccggaggcaagggtggtggaggcgtccgagtcctgcgcggtaccctgtgactatgaggtgccgctgatgcctgagatcacggtgccagcggactgcgtcacttgctgcaccttgccagccacgagtccacgacggtcccgactccggcgaccttctcgtacattgtggtggctagcttcttgctgtactctccgtggtgcatgtcgctgccaacttgatcttgtcggtgtacgtcacgccggacacgacaggcggcagcgctgccttcaggcattgtgtacgtggccgcatccttccactcgaaagagtcgacgacaggcgtcgtgccgatgtcctcgccttcccgcagcacacgcatcgtggagtgtggtgccgccgagacgtccaagacggggccgccgaggtcaccgagccgacaccttgacacgttgcgccgtcgccctccactgctccatctcctgcaccgctagggtccttgccatgtcaaacctgacaccgtcagcggcggcacacgcaaacaaccaaaaaagtttcaaatctaacaccgtcagcggcggcacatgcaaagctagagatcaacggagcaagagcttactcggcgcgatatgaacctcaggatcggaatccatggcgatggttttgtcctcgatgtcctcttggtacctgcgctagtccacatcacccatcctctgcgccgccacatcgcgttcatcctcctcgctgctgttgctgttgttgctcacgccagcgcggtcgccgctgtttctccctgccacctccgccgtcattgttcccgctgtggtcgccgccggcgatggtgttcttgagcaccggcttgtgttgcttctccttccccagtgcatctgcccctgtcccccctccgccgctgctgctgcaacaaacacccaccgaaggcggcaacggcgccgggcaacatgatggcgaaggtcgggaggcgctcacgcaggtgctcaccaaggcgcgggaggccgtcatgtcgctcatcggcaagaaccgcgtctccaacaccatgaaggctgtggatcgggcgtggaggggcctaattgcaaacatgtagccacgctagactgccacgtaggacggtcaacccggtcagacgtgtttttggactgcaatgattcacttaaacaagttcatggatcttaatgttgattttacaagatcgtggacctaagtgacaccacgctccaactttaaggacctttcaagtaaatgctgttacaagtgaaacaacataaggaagcatccacctttagatatttcttacttttataagaagagcaactaaatataataattttgtagggttcgctcatcaacatggaaggccctaaccgaggaatagacatgatggactatgctctaattgaatatgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgcatcaatgataggctctggaggcctatggaatcggccagaaacaatttgcattcctggcgattacggtgcagttgacataactttatcacgttttaattgttcagctgaggccaccgtagagattcttatatcagaagtgcaaagcagtttcaatttgttgctcggttgtttaaccagtgacttggataaggaaatccgtctctttgatggtgtcatcagtgagtcacgtgatttaaagaggtcggtggttgctgtaacgagggattctttcatagatttgaagttcgaagtgggcgcgtttccatccagtttcgaccagcattatgtttccttcaaggagaaaatccatggctatgatactcaagaaataaagactgattttgcgttaatctcagtaaaggtgacttggtcagctttgctttctggacgagtgatacctctgtttctgtaacagagtgggccatgcaacatcacatttacacacccatgaatatggccctaacacacgctcaaagagataaaaatcaacggcacatctttgatctcactagatctataatgttaactttattatacttattatttagaatgtatatttcgcatatgaaattatgtatccaagtttattacagcaaatgcttgaataacggcattgcacttacctaacctattttcagacttatgagggagaatctagcgttcaaatttgtgtcttgtggactttgaatagtcaaaatcgatcttcttttatggct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0646600, RefSeq:Os07g0646600