Os07g0654450

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Revision as of 08:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0654450| Description = Armadillo-like helical domain containing protein| Version = NM_001188391.1 GI:297725912 GeneID:9272496| Length = 348...")
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Gene Name

Os07g0654450

Description

Armadillo-like helical domain containing protein

Version

NM_001188391.1 GI:297725912 GeneID:9272496

Length

3480 bp

Definition

Oryza sativa Japonica Group Os07g0654450, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28148206..28151685

Sequence Coding Region

28148206..28150359,28150608..28150937,28151560..28151685

Expression

GEO Profiles:Os07g0654450

Genome Context

<gbrowseImage1> name=NC_008400:28148206..28151685 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28148206..28151685 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcaccggccccaacaacaaatccgattaccaattgttcttccggacaagaggtgctttcagatcccttggcggcaacggactgatcgtgatcgtatacttttggggtgcaacgctgagcattcgtgcttcgaacttgcattacgtgccacgtatagtgcttataatcacggtaatggttctacttgttgttggccagattctatttcgattaggtcgaaaaccacgtacctgtaactggtggccacgccgtgcgatctccctatggagccccgtggtggctatcctgttgctggctttcgcagtgcttcgatattatgatggtgcaataatcatgtggatggcgtatggagttctagttgtggctgtgatcctagcaacagtaggcaggctgcggttcccaatcatcatcaaccttgtacacagtgcactgggcagcagacacgtattttggcgtcggatttttctaaactcgtgtatgcttgctgcaatagtgatgccgcttttcgtggatgatccagaccttcgaaaggcgatggtcgcggtcgatatatgtgctgtgccaatactgtcacttggcaacttccagattccagcagcactcgtgcgtgtcatgctcgcgggtttgcgccttggtgaagagagctataacggtgaaggtgacacagcaaaccttttcacatctctacaaatcttctatggaatggtgtttgcccaaggactgctttacgtttttgccggcatggtggagtttctcttctcgttcatcactcggagatccctcgtccgccatggtggacttacaggtcagtggggggtggaatctgtcgatctgtactacgaatacgccttcagcaaatacatgaaaggaggcctgtttgctccagagaggatcagcctcagtaacttcgccattgattctctgaattctgacctgtccaagaatcagctatacggggtctggatgatgcacatttttctgcaaagacacccaacaagggaacaactcctggagaagctcaacacttcagcgcagacaatggccaggttgatcagcatgttggactggacaaggagaaacgaacatccaactatcaggttgtatgctgcgaaggttgttgcagagctcgcaaagagccttcgagttgtaatcgtccctggggcgatgcagctagtatctacgcttctggatactgatggcaaaccggaaaaaggacacccacttctggatgcagatgattaccaagatccttttgttgatacaacagtaaaacaagagaaaagacaggatgcaactggccatcaccaaggcaaaacacaagagacacttggggacactgataggctgttggaaacaccgaacagatcaacacgcaccaacgcccaaacatccatattacgatgttggcggaaaatatcagcatactggtcaattcccaaggagcagccgttgacagacaacgatcttctccctgcattgggcatgtcaatagtttacaaccttgttggttgtgatcaaaataaccttttggaaatcgatagagtaactgacctgatccctaaaatcactggattcacaagcttcagaagtgcaatcatgaattctgaatcacaacagaaggttctcttaaagtcatcactgaaggtgctgcagagactcacaagaattgaaggggaaattggcataacgctgcggtacaagatatcaaaacatcccttcttattcagaaaccttgcggagatcttgggagacagcagcagcaatcaggaattaaggaagctcgtggcaggaatcctcagaaaccttgccattgacagagacacaaggcaggagattggacaaatgcaaatgctcattaccatgctgatgaaggcattcctcgattctagcagatcatttagttcaaatgttgattgcttgttgccaaaggtcgccgggcaagcactggtaatgctgtcatcagaaaatccacataactgcttcgttatgttgaaggaaccagatttcattaataaactaaaaaatatgatcctaatccatgatgataaatacatatatgtggcagtgagtctgttgcgtaatatgtgcctgcacgctcaacccgagctcacggaatcagacctaaaggaactatctcataccttgggagaggtgttggaacgaataatggacgctgaaggggcagaactagaaatcctcattggccttagttcacagatatgcaaactcattcctgaagaattttcccaagagctagagcatggacagattaagcggagattcattaagaggctagtggacacactgaatgcaaacatgaacccaagttctcattgccctgggatccggagggtggtacttgagcaatccatatacatgatggagtacaattctcactatgccaattgtttcaatgaataccagatgatggacgcactgtcaattgtagaattgacgccctcaagggctgagaattacatgtatgatgccaatatcaatgtgccccggtgcctgattttcgtggagcacagggttctcagattcacatatacgtctctcatattgagaccaaaactacggtgcattgagtttctgcaacccggttaa</cdnaseq>

Protein Sequence

<aaseq>MFTGPNNKSDYQLFFRTRGAFRSLGGNGLIVIVYFWGATLSIRA SNLHYVPRIVLIITVMVLLVVGQILFRLGRKPRTCNWWPRRAISLWSPVVAILLLAFA VLRYYDGAIIMWMAYGVLVVAVILATVGRLRFPIIINLVHSALGSRHVFWRRIFLNSC MLAAIVMPLFVDDPDLRKAMVAVDICAVPILSLGNFQIPAALVRVMLAGLRLGEESYN GEGDTANLFTSLQIFYGMVFAQGLLYVFAGMVEFLFSFITRRSLVRHGGLTGQWGVES VDLYYEYAFSKYMKGGLFAPERISLSNFAIDSLNSDLSKNQLYGVWMMHIFLQRHPTR EQLLEKLNTSAQTMARLISMLDWTRRNEHPTIRLYAAKVVAELAKSLRVVIVPGAMQL VSTLLDTDGKPEKGHPLLDADDYQDPFVDTTVKQEKRQDATGHHQGKTQETLGDTDRL LETPNRSTRTNAQTSILRCWRKISAYWSIPKEQPLTDNDLLPALGMSIVYNLVGCDQN NLLEIDRVTDLIPKITGFTSFRSAIMNSESQQKVLLKSSLKVLQRLTRIEGEIGITLR YKISKHPFLFRNLAEILGDSSSNQELRKLVAGILRNLAIDRDTRQEIGQMQMLITMLM KAFLDSSRSFSSNVDCLLPKVAGQALVMLSSENPHNCFVMLKEPDFINKLKNMILIHD DKYIYVAVSLLRNMCLHAQPELTESDLKELSHTLGEVLERIMDAEGAELEILIGLSSQ ICKLIPEEFSQELEHGQIKRRFIKRLVDTLNANMNPSSHCPGIRRVVLEQSIYMMEYN SHYANCFNEYQMMDALSIVELTPSRAENYMYDANINVPRCLIFVEHRVLRFTYTSLIL RPKLRCIEFLQPG</aaseq>

Gene Sequence

<dnaseqindica>1..2154#2403..2732#3355..3480#atgttcaccggccccaacaacaaatccgattaccaattgttcttccggacaagaggtgctttcagatcccttggcggcaacggactgatcgtgatcgtatacttttggggtgcaacgctgagcattcgtgcttcgaacttgcattacgtgccacgtatagtgcttataatcacggtaatggttctacttgttgttggccagattctatttcgattaggtcgaaaaccacgtacctgtaactggtggccacgccgtgcgatctccctatggagccccgtggtggctatcctgttgctggctttcgcagtgcttcgatattatgatggtgcaataatcatgtggatggcgtatggagttctagttgtggctgtgatcctagcaacagtaggcaggctgcggttcccaatcatcatcaaccttgtacacagtgcactgggcagcagacacgtattttggcgtcggatttttctaaactcgtgtatgcttgctgcaatagtgatgccgcttttcgtggatgatccagaccttcgaaaggcgatggtcgcggtcgatatatgtgctgtgccaatactgtcacttggcaacttccagattccagcagcactcgtgcgtgtcatgctcgcgggtttgcgccttggtgaagagagctataacggtgaaggtgacacagcaaaccttttcacatctctacaaatcttctatggaatggtgtttgcccaaggactgctttacgtttttgccggcatggtggagtttctcttctcgttcatcactcggagatccctcgtccgccatggtggacttacaggtcagtggggggtggaatctgtcgatctgtactacgaatacgccttcagcaaatacatgaaaggaggcctgtttgctccagagaggatcagcctcagtaacttcgccattgattctctgaattctgacctgtccaagaatcagctatacggggtctggatgatgcacatttttctgcaaagacacccaacaagggaacaactcctggagaagctcaacacttcagcgcagacaatggccaggttgatcagcatgttggactggacaaggagaaacgaacatccaactatcaggttgtatgctgcgaaggttgttgcagagctcgcaaagagccttcgagttgtaatcgtccctggggcgatgcagctagtatctacgcttctggatactgatggcaaaccggaaaaaggacacccacttctggatgcagatgattaccaagatccttttgttgatacaacagtaaaacaagagaaaagacaggatgcaactggccatcaccaaggcaaaacacaagagacacttggggacactgataggctgttggaaacaccgaacagatcaacacgcaccaacgcccaaacatccatattacgatgttggcggaaaatatcagcatactggtcaattcccaaggagcagccgttgacagacaacgatcttctccctgcattgggcatgtcaatagtttacaaccttgttggttgtgatcaaaataaccttttggaaatcgatagagtaactgacctgatccctaaaatcactggattcacaagcttcagaagtgcaatcatgaattctgaatcacaacagaaggttctcttaaagtcatcactgaaggtgctgcagagactcacaagaattgaaggggaaattggcataacgctgcggtacaagatatcaaaacatcccttcttattcagaaaccttgcggagatcttgggagacagcagcagcaatcaggaattaaggaagctcgtggcaggaatcctcagaaaccttgccattgacagagacacaaggcaggagattggacaaatgcaaatgctcattaccatgctgatgaaggcattcctcgattctagcagatcatttagttcaaatgttgattgcttgttgccaaaggtcgccgggcaagcactggtaatgctgtcatcagaaaatccacataactgcttcgttatgttgaaggaaccagatttcattaataaactaaaaaatatgatcctaatccatgatgataaatacatatatgtggcagtgagtctgttgcgtaatatgtgcctgcacgctcaacccgagctcacggaatcagacctaaaggaactatctcataccttgggagaggtgagccctgctaatacatactacaagtgcaacatagaggtgtatataatacgtatgatactatcatttgtgcaagtgcaatatagaggtgtatagcatgccatatcatttgtacatttactgtctattaatttttgtcatttttggtaaaaagaagggggcgtttatttaccaatgaactatataagtataacttagtttgtacaactatattatcatgctacatgacattgctggttccactacaggtgttggaacgaataatggacgctgaaggggcagaactagaaatcctcattggccttagttcacagatatgcaaactcattcctgaagaattttcccaagagctagagcatggacagattaagcggagattcattaagaggctagtggacacactgaatgcaaacatgaacccaagttctcattgccctgggatccggagggtggtacttgagcaatccatatacatgatggagtacaattctcactatgccaattgtttcaatgaataccagatgatggacgcactgtcaattgtagaattgacgccctcaagggctgagaattacatggttttcttgggtgacacaggtttcatggaatgtaacacacctctctctgccctagcggacagggcaaaagaactgatgggtcgtcagtggctgcaaggcatcaacagtgccaactgaaaaaaaataaaatgattttgcatatatacagtcagaataccttgcatattgttagtgcagggtagacaaagtgattctgcatttacagtcagaagacaacgcatgttgctagaaagaacatatatttacctttaagatgagcaaagggtattgtatctgtacctcattaatcttgcactgtaatctgtgtgctattgatgatttatccaattatcatttgttggagtggccatattgcaactcctatcccacgttctagcgtgttcaagttttggcactgcttatttccataaaatctgtggtttattcgacaccagaaaattgggttttctaacctagtgattaaccccattcaacacaagttactatggctgagaaattcagaccatgacaatgcccaacttatggagtacaatgctccactttcttgttctgtgcacaaagcaacaatgttgattaatgtgagctcgactcctatttaagtcatgcgcccatgtcaatgcagtatgatgccaatatcaatgtgccccggtgcctgattttcgtggagcacagggttctcagattcacatatacgtctctcatattgagaccaaaactacggtgcattgagtttctgcaacccggttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0654450, RefSeq:Os07g0654450