Os07g0657900

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Revision as of 08:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0657900| Description = Similar to Thioredoxin reductase| Version = NM_001067050.1 GI:115473832 GeneID:4344159| Length = 4428 bp| Definitio...")
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Gene Name

Os07g0657900

Description

Similar to Thioredoxin reductase

Version

NM_001067050.1 GI:115473832 GeneID:4344159

Length

4428 bp

Definition

Oryza sativa Japonica Group Os07g0657900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28354780..28359207

Sequence Coding Region

28354836..28354872,28354954..28355025,28355170..28355383,28355475..28355580,28356012..28356277
,28356938..28357217,28357453..28357560,28358013..28358099,28358185..28358289
,28358732..28358862,28358986..28359046

Expression

GEO Profiles:Os07g0657900

Genome Context

<gbrowseImage1> name=NC_008400:28354780..28359207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28354780..28359207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcacgcgcctcgccgtggccgccgccctctcggccaaggcgttgcgcgcgtcggctgcccccgccgtcgacgaggaggcccccgcatccccgcctccatcagatcttggcaagggagtggagaacttggtgatcataggctctggcccggcggggtacactgccgcgatttacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgttcctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggcgtcactgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgcaggaccgagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgtgcaggatcatgaatggaggcaagccgttactgcagctggatccggatgtgtagccgctttgtcggtggaaagatacttagttgccaacgaccttcttgttgaatttcaccagcctgttcgcgaagaaaaggagaaggagattacagatagagatgtcgagatgggctttgacatttctcacacaaagcataggggacagtatgcactccgcaaagtatatcatgaaagtccaaggcttgtctgtgttctatatacttctccaacatgtggtccttgcagaaccttaaagccaattctaagcaaggttatagatgagtacaacgaacacgttcattttgtcgaaattgacatcgaggaggatcctgaaatagcagaagctgcaggcatcatgggaacaccatgtgttcaattttttaaaaataaagaaatgctcaggactgtctctggtgttaaaatgaagaaggaatatagggagtttatcgagtcaaacaaatga</cdnaseq>

Protein Sequence

<aaseq>MAVTRLAVAAALSAKALRASAAPAVDEEAPASPPPSDLGKGVEN LVIIGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPDGVTG PDLMDKMRKQAERWGAELHQEDVEFVNVKSRPFVIRSSDREVKCHSVIIATGAAAKRL RLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKYARHVHLLV RKDQLRASKAMQDRVLNNPNITVHFNTEAVDVVSNPKGQMSGIQLKRTDTGEESVLEV KGLFYGIGHTPNSQLLQGQIDLDDAGYILVEEGTAKTSVDGVFAAGDVQDHEWRQAVT AAGSGCVAALSVERYLVANDLLVEFHQPVREEKEKEITDRDVEMGFDISHTKHRGQYA LRKVYHESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHFVEIDIEEDPEIAEA AGIMGTPCVQFFKNKEMLRTVSGVKMKKEYREFIESNK</aaseq>

Gene Sequence

<dnaseqindica>57..93#175..246#391..604#696..801#1233..1498#2159..2438#2674..2781#3234..3320#3406..3510#3953..4083#4207..4267#ccatcctctccctctcctctactccacaccctccgcttctccactcctccctcgcgatggcggtcacgcgcctcgccgtggccgccgccctctcggccgcgccgccgtcctcccgccgccgcagggccttcttccatcactcctgccgcccgctcccttcgtcggcggcggcggcggccaaggcgttgcgcgcgtcggctgcccccgccgtcgacgaggaggcccccgcatccccgcctccatcaggtgctcgcgccctcgctctctattgctccagatttttttttagattggactgttccgagtgttcagtccgcgccgtgcgagctcgcttgcatttgatctgatgctgtccatggagctgaagacgatgatttgctgttcgtgcagatcttggcaagggagtggagaacttggtgatcataggctctggcccggcggggtacactgccgcgatttacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgttcctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggcgtcactgggcctgatctcatggacaagtaaacattgctcatttcttcgcatgtttttgagtttatctgttgttaatgttgtgttcacttgctcatatcgggccatggattaaatcagaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggttagcatcattgtgctcttcctccttttcgagttatgaactttccacttttcacaaggtgtcattgttggtttatggtaatacaatgttcttgacaatagcgattttcacaatgttcttgacaaaagtattagtatgatttaaacaaaactatcatccatttaattaagaatataacaaaggagagctggtcaagttgtgtcgggaaagcatatcagtatacaatttttatatggtttacttaattagctcttacaatatttgcctagtcatgtgctttagttctttagttgtgctgtaacttctctttctataagtataatgaccagtttgatatagcatatagcagtcgtctgttataattaatagtgcacagaactactttggacaaatgtttttgctgcgctcatcccagtgagtgtcctatacaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgcaggaccggtaaggaactttcaagtcctatccctagtaaatgtatatatttaccttcaagtgactactctgttcatgtaaatatcttgcccatgaattgttaggatctcacttgttttgtgcattcacattgttaatagcttaaatgactcataacacaggaggattgcttttctcttttcagctgtagtgtttttttatttatttttataacacatttaccttttggatctggcttacaagggcatagttatatgctgggctacagctttcaaatggtgtttacaattagctcctgacatggattaagcaaccttgcagcttgactcacttttagcatctcaccaagttagacagtggaaattgtaaaattggtttatatttaggagaaacctgaggacaaacactttgggcctgtttggctgcacttaactttcctgttgtgcagccaacacaaacagtaagttgagtctgtagctgcagcagcaacggctgcgcacagtggctgtaccagccagccgaacagggcctttggaacttatctgtatattaatttgttatgttctttgaaggatgtagcttgtcttcagttgcataaaatattaatgaggtaaaattttcaattccctggatgtttggttaacaggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgtgcaggtaactccatccttcacttcatgtatataacttctacatggctgtaatgtgtttcattcttgaaatttgaatataaccctgccacagttcatatgtgccataatcattagcatgtcatgtcttggtggtcttgtagcacaccagcacatcacgtcttcttttattgaacactagctggattggaatacaaatatgagtattctagttttaatgccttttcaatgtttatctgcaggatcatgaatggaggcaagccgttactgcagctggatccggatgtgtagccgctttgtcggtggaaagatacttagttgccaacgaccttcttgttgaatttcaccaggtactatcttgtctgcagcatatatttctttatggtgactgatgcttctgcgaacattatctagctcaatatttgttgttccatggaggctagctgttccactgtcaaattttgtgcctatgattactggtacaccagacactgcagcaatttctgctgttgatctttttcctctaattttagggtttctagttgccatatacagcaattctgtgcagaccatgttgtgcttttatttcatgtataaaatttgaggttggaccttgtcagcatgtattggtattgttatgtgtaatcgagaatatatttattctagaaatgtgaaaggatgaaactaaatctatttgtcattgtatatgtatcgatcaatgcacatttagcatttttaattgaccatctctagcaaccggtcaggcttacaagatacacttcatctttttattaaattacagcctgttcgcgaagaaaaggagaaggagattacagatagagatgtcgagatgggctttgacatttctcacacaaagcataggggacaggtacctaacacatttgcttgtactgtggcttcatattggtgcaaacatttatgtgaaaactgatttgagcttgcttcctttgcagtatgcactccgcaaagtatatcatgaaagtccaaggcttgtctgtgttctatatacttctccaacatgtggtccttgcagaaccttaaagccaattctaagcaaggtttgttcttgaaattgaaattgggctctagtcgtcacaagtcatcactctagacaaataaaatgccttgatatacagctatctgattggccctccagtccatcgatcattatgcattcatattgacaggccatgttaacgttcatttctctgatctaccaatatgaccaatcaagttcatttctctgatctacaatatcgaatcattaaagaaaatccatttcaaggtgctaactttgtgatgttcttgtggtctggacaacacaggttttcagtgcttcttgataaaccttgtagaactgatatttatagttgcttgactaacatttgattgccgcaccattctacagaagttccgttctgttagtcatgcttgtgttagttttgttgttaacgttgctagttgctacttggcacttgctaatattgatatctttttcaggttatagatgagtacaacgaacacgttcattttgtcgaaattgacatcgaggaggatcctgaaatagcagaagctgcaggcatcatgggaacaccatgtgttcaattttttaaaaataaagaaatgctcaggttggctatcttggatttgtttatctgctactagtctatataaacatcagtcacttcattgctgcctaattaatatgatgcaatggaatcccttctgatcgtttttaaccttggactatgcaggactgtctctggtgttaaaatgaagaaggaatatagggagtttatcgagtcaaacaaatgagctgaacccaacatacgattcaaattttaaagtgtaatagtcttcttttgcccatactgactatttctagctgccaccgtggtggccaatttttggtcaaaaattttcagatgggccgggtgtagtgcggttcaagaggaaattagccggtcgctcctatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0657900, RefSeq:Os07g0657900