Os07g0668200

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0668200| Description = Conserved hypothetical protein| Version = NM_001067113.1 GI:115473958 GeneID:4344224| Length = 6815 bp| Definition ...")
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Gene Name

Os07g0668200

Description

Conserved hypothetical protein

Version

NM_001067113.1 GI:115473958 GeneID:4344224

Length

6815 bp

Definition

Oryza sativa Japonica Group Os07g0668200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28875302..28882116

Sequence Coding Region

28875553..28875669,28876010..28876114,28876419..28876478,28876886..28876974,28877348..28877469
,28877599..28877705,28877778..28877848,28878114..28878207,28878747..28878898
,28880498..28880611,28881830..28882040

Expression

GEO Profiles:Os07g0668200

Genome Context

<gbrowseImage1> name=NC_008400:28875302..28882116 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28875302..28882116 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggccgccgccgggcgcgcgcgccgcctcctcacgtcgccggcggcctccggtatcctctccgcgccgcgccccgggtgcgcggcgctcgccgggagcggcgcccttcttccccgtctcgatggtgtcccgtcctcgccgtcgccgtcaccggcccctccgctcctggctaggagcttctccgccacgtcctcgtctcgcctaccccgtaacttgctatcgccaagtatatcttctcaatggcggaatgagaaatcggtgtgctatcacatggctgcaactcactactcaacagaagcaagtgacattgatcaacctacagaggctgtagtggagctgtatcagaaaatgttgaaatctgttgaagccgagaccatgcctccgaatgcctggttgtggtcaatgataagtagctgttccaataaggaggacatcaaactacttattcagattttgcagaagctaagagtatttagactatcaaatcttcgcatcgacgcaaacttcaacgatcatctttgcatgaaagttgcagaggcttgtgctcgtgttggtgcccttgactatggtttgaaggttttatggaagcataatgtttatggaattacgcctaccattggttctgctcattatctactgaaacatgctaaagagaaaaatgacactaaactaatgggaagtataatgcaagtccttcagagaaattcgatgccattgcaaccaggcactgctgatatagtcttcagcatctgctataatgctgatagatgggatttactctcaaaatatgcgagaagattcgtgaagtctgaagtcaagctgcatggtgcttcatttgacatttggatggacttcgctgccaaagttggagactcccaatctatatggaacatcaatagcctgagaggcaagtcagtcaaacgctataatcttgcaacaggttttgcatgtgtaaaggggtttctgcttgagcgcaaaccagaaagcgccgctgccatgattaaattacttcacaagcattcacctgatgagaagaaacaattggtgacggatgagctccagaagcttgttgctgaatggccagcagaggtgataaaaaggcagaagaaagatgataggaaggcgctggaggaagctttgattacagatatccctcaaatgatcagttccatgtcaaagctgcgccttgatatttctgtgaatttggagaagcttacctctcaacctgaaacagcatga</cdnaseq>

Protein Sequence

<aaseq>MQAAAGRARRLLTSPAASGILSAPRPGCAALAGSGALLPRLDGV PSSPSPSPAPPLLARSFSATSSSRLPRNLLSPSISSQWRNEKSVCYHMAATHYSTEAS DIDQPTEAVVELYQKMLKSVEAETMPPNAWLWSMISSCSNKEDIKLLIQILQKLRVFR LSNLRIDANFNDHLCMKVAEACARVGALDYGLKVLWKHNVYGITPTIGSAHYLLKHAK EKNDTKLMGSIMQVLQRNSMPLQPGTADIVFSICYNADRWDLLSKYARRFVKSEVKLH GASFDIWMDFAAKVGDSQSIWNINSLRGKSVKRYNLATGFACVKGFLLERKPESAAAM IKLLHKHSPDEKKQLVTDELQKLVAEWPAEVIKRQKKDDRKALEEALITDIPQMISSM SKLRLDISVNLEKLTSQPETA</aaseq>

Gene Sequence

<dnaseqindica>6448..6564#6003..6107#5639..5698#5143..5231#4648..4769#4412..4518#4269..4339#3910..4003#3219..3370#1506..1619#77..287#ggttcgcttccctttctcgtcagaaggctcactccgtctccccctccggccgccgcaaggagaagcagcagcagcgatgcaggccgccgccgggcgcgcgcgccgcctcctcacgtcgccggcggcctccggtatcctctccgcgccgcgccccgggtgcgcggcgctcgccgggagcggcgcccttcttccccgtctcgatggtgtcccgtcctcgccgtcgccgtcaccggcccctccgctcctggctaggagcttctccgccacgtcctcgtctcgcctaccccgtgagttctctcggacgttgatccgcgcgtttcgctatctgcttgtggtgatctcgatgcgctgcttccttaccggtttgtctggctcggcatttcgtcgaacgggtggtgggcgcgcgggggagtggcgttcgagttgtatggttgatggttccaaagtggcgtttgagctctatggtctcgagggttggttcgtgttgttaatcctgttcctgctctaagatcaagtgtttaaggtgtgggattaggggatctgtagggcttacgcgagggtttaaggattttggcattggagatattcgctagtacactattatctagaaaatgcagtgaattcctgtgacttagtggggtaatatttcacacaaggctggggactacgagccccataatcaaatagcaggtgcttgggatgttaaaaaaaaaaactaggagagcagagcttcccccatttccattaatattggctgggagaaaggccgggttagtttagaattctaccgacaacaaaaagagttttcaagctttcccagcacaactacatttcatgagactaagggagcacaaaagtcatctcatgccaaaggctgcggcgcactacaatttagacaactacaagaccatctattttgccaagcatcaggacaagtgaggtgcttgggatgttgtgactgcgcatgtttgttcagctgtaggcttcatacttgacaagttccatacttttgtaattaagtgtatttgtcgaagctgatacttacactgcagttctcatatggtgaattgctttgcttcattcttacactggtttatgtttgtcttgtcagttgatcatagttaatccagtgcactcttcaaatttccctgcactgattattcagacttttgtgcattgaacattgaggtcatagtgctatctgtattactggattccagtatctagtacaataaattgaaaaaaaggggggcagcttgaatgtagctaatcggaagtacagctgaattgattataacagaacaaactctgttttttcaaaaatttctcccttgtttactgtacaagtttgttcgactgtgtgtgtttgctgcttccagctgacttaagtgacccttaactgttgcaacaatgcaactcttgtattcagtagtttgttccattatccattgaagtactttgaatgaattaaactttgctaatgatgtatatcttgcataaattaggtaacttgctatcgccaagtatatcttctcaatggcggaatgagaaatcggtgtgctatcacatggctgcaactcactactcaacagaagcaagtgacattgatcaacctacaggttattcagaattctatgttctgcactggccgccatttttatttcctattcacccactagttctctcccctgtggtacccttgtgtcatgggctttgggccaggcgtcctaggctcattggataggattagggtttgttaggattagataaggtttgttaggattagattaaagagtcctccatctatataaggagagatactatcccaggtcagctaggcattagatcaagatttatcttagtgcccatcggcctgccttctcagtgcgacggagagcgtcgcgccgtttaggttcaggaccgttccttgttatttcatctactataatccaatctatccccattcatcccggttcttctccacaaatccttgcccgtgacaacttggtataagagcttcggttccgtgcccatggataccgagatcgctgcggtccccaacatcagcgaaggtcttgctgagatctcgaggaagatgatggatttggcggcgcaactccaggctctggcggctcaatcagccgagcaggccatgcctcttggagccgccgagcgatccgaccggcgggccatgacgttcctgcgcccacggcagcaagacttcaagcgccgtttgggagcaggatgcgtcacctgcagcagccaaaggtggcagtctctctgggtcgtccaccagtagcccttctgcccacattgatggccacacgacttggcggcatggaggcatccatggtattgtggcggcgcggttttcagaagcagcaagaatggcggagctgtttccgtcgctactttcaacagcggcggcggagaaaacaacgatttctgttaccgtggtggcgcggcgtgaagcaggcgcatcgcgctctttttggggcggcgctgattacgatagagggagatggggtttctgttttccctcagctgcgcaaattaaatgggccagattggtgggctgggcttcaatcagcagcagatccatgttggcttagttatgtttaccacacgggacagtcaagttgggtttcagatttggatttttgcgttttggtgtggacctaattttccgaatggggtcctcctgtccatgtcctaaggaggcaacataggccagattgttttgtttgagtctagcagggtctgctgcagctcgaggacgagctgctcaaaaaggagggagtaatgtcatgggctttgggccaggcgtcctaggctcattggataggattagggtttgttaggattagattaaggagtcttccatctatataaggagagatactatcccaggtcagctaggcattagatcaagatttatcttagtgcccatcggcctgccttctcagtgcgacggagagcgtcgcgccgtttaggttcaggaccgttccttgttatttcatctactataatccaatctatccccattcatcccggttcttctccacaaatccttgcccgtgacacttgttaacttattcaatttaaatgcttagttgctgtgatcattatcagtgcatttactattgtgctggtaatcttcataacggctagttgtttgatatcatgttcccattttcttatgtcatggatgtccatagaggctgtagtggagctgtatcagaaaatgttgaaatctgttgaagccgagaccatgcctccgaatgcctggttgtggtcaatgataagtagctgttccaataaggaggacatcaaactacttattcagattttgcagaagctaagagtatttgtaagtggattttcctcataaattaagacttcagagtgtttttcgccttctatccttgctcattgttcttggcttttctgtatcccttgtgtgttgtttggaaagctggcttagagcactgcatgttagattgcattactgtcagaacatatacacattcattgatagcattgatgaatgtgcagtgcgaatatttaatttccagttttttcatttatttctatgaagctgggatgcttggacagctgagttagcatagagtttccactatatggttaatatattggttgaaattttaactgaataatttgaaaggccataatattttggattgctacaggaagattctaattgtttttgtaaagaaccagttttggtccctgactttatcccctttatagttagcacttagtaacactattaatacgtgactgatgttcgtttacatgagataggcgatggtagttctttatatttctctgttacatttgttctgtcactagaagtgatctttaaactaaatcgatttattgatacagagactatcaaatcttcgcatcgacgcaaacttcaacgatcatctttgcatgaaagttgcagaggcttgtgctcgtgttggtgcccttgactatggtatgatcttatttaaaggtctaaatgatcaattttaaaggattatataatgctaatataattaggcatgtgtggcacttccaattatgtggacatgttagctttctctattgtccagaagttgtgtgtctaatatacgtgaggtggtgaactttatttttttcatttcagtttggaaattctccattttaacctcaaaacatgaggctaatggagctcagaatcctatttcccaccattaattctttttgtggtataaatccaggtttgaaggttttatggaagcataatgtttatggaattacgcctaccattggttctgctcattatctactggtattcaatgatatagaaacttttcttatcaccctaaatgtcgtttggtactgatttttttcccttctccagaaacatgctaaagagaaaaatgacactaaactaatgggaagtataatgcaagtccttcagagaaattcgatgccattgcaaccaggcactgctgatatagtcttcaggtatgttttcatctgtttttagattctatttaccaaagtgcactcatttctttttggtgtttttattttgtagacactaagttataattttagtttttatgatgccatgtatttgtctgtattgtgcagcatctgctataatgctgatagatgggatttactctcaaaatatgcgagaagattcgtgaagtctgaagtcaagctgcatggtgcttcatttgacatttggatggacttcgctgccaaagttggtaagtacttccattcttcttatgtttttttatctttagtacagtgttaaaacttacaacaaaccccagcatgtttaattgctgttctggtccttacccaagttacaacttacaagaagttgctattagttgtggatggactaaacatgtttcatttctcattcaactggtatggcacacaactgtggtagtcaccttcttgattacagccattaggagcagtgatattgcagaaaaaaatgtttgtttgcggaacatttattttcagttgtttgatactcaaatctctattgcccttttgtatttcaaacccttcaactttgataagatattatttggtattgtactatctaataaacattttcttctgcaggagactcccaatctatatggaacatcaatagcctgagaggcaagtcagtcaaacgctataatcttgcaacaggttttgcatgtgtaaaggtaattattcttataataagatgtagcttcaatttctcacatctatggtatttttaagcatgccaaattaagaactactacctccgtttcaggttataagactttctaacattgcccacattcatatatatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtagtagtgttcagaataaatagtactacagtagcatatttgttatcgactattgtccatgattcattactataagttttgccccttcttagcataactatgccagtgctttcactaaattgtttatgctgcccaccttcaggtttttaatgtcagactctttatgaattgtcttgtgcaggggtttctgcttgagcgcaaaccagaaagcgccgctgccatgattaaattacttcacaaggttggtttctccatgctaattgctattagacctgtattcccaaaatagagattgttccataccatcatcatactctggtttctctccgggtaatgctgtctctttcttactcttaatactgtactgcatctttgctggtattttcaaccttctccatatcatattattatcgttggtgtttgaaagtgaatatatttttcatgaaatatagcgaagctagataccaaaagttgggtagttgatgtttacgtaagctatcttgacaagacgcgctttcctgatgaaagtttgtgattgaatgtagcattcacctgatgagaagaaacaattggtgacggatgagctccagaagcttgttgctgaatggccagcagaggtgataaaaaggcagaagaaagatgataggaaggtgagattaaatgacctgttttctttcctggcaattcgggaacggattattttctccctgcaacactaggtggccagcctatttcatgctgggacattaagctctcacctctagtatgaaaaatcagaagcatgctttagaatacctaattgtccataacggctggtgtgactggagtttcggtgattattggtatgtggtaaattttagaagaaataaagagctgtcaactaggcaaagccacttatttttgccgaagtacttttgctgctttctataacagtgtatctgttggtttcacattactatcatctaataacgacatccatgtctttatcaggcgctggaggaagctttgattacagatatccctcaaatgatcagttccatgtcaaagctgcgccttgatatttctgtgaatttggagaagcttacctctcaacctgaaacagcatgagaagtaacacaggtgcccagatggcctagcagctgaaattacatgagtacaggcaggcggacaatatcacagtccagccatttgtattcgactacattctatttgatgggtagcacactagcactagcctgcccgacaataacatgtatacaacacattccgttgtttaccttgccatgtgcttttccatgacagttttgtagaaaaccttggtgaaattgcacgcatgaaattcaggtatgcattctcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0668200, RefSeq:Os07g0668200