Os07g0673200

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0673200| Description = Similar to F22D16.14 protein (RING finger family protein)| Version = NM_001067141.1 GI:115474014 GeneID:4344254| Len...")
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Gene Name

Os07g0673200

Description

Similar to F22D16.14 protein (RING finger family protein)

Version

NM_001067141.1 GI:115474014 GeneID:4344254

Length

3815 bp

Definition

Oryza sativa Japonica Group Os07g0673200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29112910..29116724

Sequence Coding Region

29113166..29113271,29113436..29113494,29113603..29113740,29113959..29114210,29114658..29114902
,29116088..29116253

Expression

GEO Profiles:Os07g0673200

Genome Context

<gbrowseImage1> name=NC_008400:29112910..29116724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29112910..29116724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtttgccaagaagtacgagaagtacatgaaggggatggatgaggagctcccgggcgtggggctgaagcggctcaagaaattgctcaagaaatgccgctctgacctccaatcccacgagaacgacggctcctccgccggccgctgccccggccattgctctgtatgtgatgggagttttttcccatctcttctcaatgagatgtcagccgttattggctgcttcaatgaaaaggccaagaagcttctcgagttgcacctggcatcaggtttcaagaaatatacaatgtggttcaccagcaagggtcacaagagccatggggcattgatacagcaaggcaaagacttggttacttatgcaattataaatgccgtggccatgaggaaaattttaaagaaatatgacaagatacattactcgaagcaagggcaggaattcaaagctcaagcccagagtctgcatattgaaatacttcaatccccatggctctgtgagctgatggctttctacatgaacttgagaagaagcaagaagaacaacggtgctatggagctctttggggattgttctctcgtattcgatgatgacaaaccaacaatttcatgcaacctctttgactctatgcgtgtcgacattagcttgacatgttcgatttgcttggataccgtgtttgatccagttgctctttcctgtggtcacatatattgctacttgtgcagctgttctgctgcatccgttacgatcgttgatgggctgaagtctgccgagcgcaaatcaaagtgcccactgtgccgacaggcaggagtctttcctaatgctgtacacttggatgagctgaacatgctactaagctatagttgtccagagtactgggagaagagaatacagatggagcgggttgaacgtgttcgtctggctaaggaacactgggagtcacagtgcagggcattcttgggcatgtga</cdnaseq>

Protein Sequence

<aaseq>MKFAKKYEKYMKGMDEELPGVGLKRLKKLLKKCRSDLQSHENDG SSAGRCPGHCSVCDGSFFPSLLNEMSAVIGCFNEKAKKLLELHLASGFKKYTMWFTSK GHKSHGALIQQGKDLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQ SPWLCELMAFYMNLRRSKKNNGAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCS ICLDTVFDPVALSCGHIYCYLCSCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVH LDELNMLLSYSCPEYWEKRIQMERVERVRLAKEHWESQCRAFLGM</aaseq>

Gene Sequence

<dnaseqindica>3454..3559#3231..3289#2985..3122#2515..2766#1823..2067#472..637#tcgtttcaccctgctcggaaaaaaaatcctaaaagcttaatttctttctttgttcttattactgtctcacgtgagacgcctgagctcaactgaatttctggccccctcttcatctccgtgagcttcgctgccctttttctttgccttctcttggtggtttaatttcatcagttttcctccatttccttctttagccattgttccgattgccgtctcttgttgcatgtgcattccttctctgaaccgtgcccccccaattcgtccgcgagctatacaaatttggattcgttttgttcgtttccagctcaccctgtaaatcgtttctcaagtcattcaggcatactcacatcgcacaaacatatatataccccaagattttgaatccatcaatttgcagacgccataggcgtacaagttatccattcaagcgctccaaaaatttgccaagaagtttgccttaaatttggattcatgaagtttgccaagaagtacgagaagtacatgaaggggatggatgaggagctcccgggcgtggggctgaagcggctcaagaaattgctcaagaaatgccgctctgacctccaatcccacgagaacgacggctcctccgccggccgctgccccggccattgctctggtgaataaagctactatacctttcaatttcctcctatatggtctctttgatgcgtaggactattcttgattctcttacactgaaaataatgctgttttttcaaaagaaacctgttggtttcttgttttcaatgaaaacgaggattaatgggcgggctcatgccttttggtactttttttttcttttggttaaaaaaggacaaacccttggcaaaatggcatacctagaaaaggattagaatttaggacttgttgcaacttgcaagaggcaattgttttttttttcagtttttttagtttcatcgtgctgagaagtgagaagaactagttgataattctgcgggaacagaggaacctgtaggctgtacacagcggttttggtattcggcaagttgaactcttcctgggaatgccaacctattttctcttatttatcctttagatatatgtatcctaccttgttctcgctgtacttcttttatttatagtgtcaaacaattacagcttcgcatggaagagaagctttactgcagagaaagcaacaatttgacttcttagcacaattctttcgaagcattttctctgtcgccccttgtatggttaagattggattttaaaatggcgataatgttttgtttgctttcaaacatcaataccaacaaattaagttgatcggtcgggtatttggaaaatctgcatatactactgtcgtgtggacggcagatttataacataacttcaaattgaacactactagagatagcccattgactgccccattataatagtgcaagtcattgtcaaggtggtaattgtttgtcaatgacaaccacgtaatttttcaagtgccaagatactataggccgtagtaaccatggaaaaggggatgtcaaccatcacaaagtccactcttaattttgtattcattagcaggggcttattcatctgtccttttgaataactttcgattattttagttagtgtcgacttgtctactataatttgggatggttttgatataaatatttcagagtcctaaaagagtcgattattcctggttctttcatattgatattgtaactactgcggtttgcctagaaaagaatattagagtcgccatgatggttatttttgtctaccttacctttcatggttggttatctgacaaattcctatcaacatgcagtatgtgatgggagttttttcccatctcttctcaatgagatgtcagccgttattggctgcttcaatgaaaaggccaagaagcttctcgagttgcacctggcatcaggtttcaagaaatatacaatgtggttcaccagcaagggtcacaagagccatggggcattgatacagcaaggcaaagacttggttacttatgcaattataaatgccgtggccatgaggaaaattttaaagaaatatgacaaggcatggccttaaactttaatctttgcacctctctttatctcttaaaggcattagaaacatttaaagcttactaaggacaaagggggaatatttttttttggaaaccgaacgaagggggaagataactatataagtattccattatttgagagaggaacacaaaaatttcacacacttttagttataagcatgtgagtttggtgaagcccaaaatgctagtctatataggtgtcaatgggtcatatactcatatggtatcttcgaggatatatatacacacacacacagaggatgattgagttgtatttatatatttaatctttctagtgactatttttgttagaattaacgtatctatcattgttcttgtctttggatttaagacggtcctcaatggttatattaataattatgtaagactattaactaaaagcctctcttttccagatacattactcgaagcaagggcaggaattcaaagctcaagcccagagtctgcatattgaaatacttcaatccccatggctctgtgagctgatggctttctacatgaacttgagaagaagcaagaagaacaacggtgctatggagctctttggggattgttctctcgtattcgatgatgacaaaccaacaatttcatgcaacctctttgactctatgcgtgtcgacattagcttgacatgttcgatttgcttggtgagtttgcacttgtcgactgcaccaagatcttaatttacctaacaaggatatcattaatacactaaattttttatgttatgaagtatgaattcgtacttaggttatattctccttgttataatgtgctcaagtatcaactttgttccttgttactgcgaaattcatagcacttccttattgcattgtaaatttctgaaattcacttgcttttgcaggataccgtgtttgatccagttgctctttcctgtggtcacatatattgctacttgtgcagctgttctgctgcatccgttacgatcgttgatgggctgaagtctgccgagcgcaaatcaaagtgcccactgtgccgacaggtataaacaattccttcaattcgatctttgttttagataacattccttcaaatttgatgaccatatgcttgtgcatgtcccatcaactgacctgatttctcatttcaggcaggagtctttcctaatgctgtacacttggatgagctgaacatgctactaagctataggtaagtctgaactgctcaggatcatatcatcagtcatctgcacggccgtacaaatgtacacttttttttatgtcatgaacatagattatcaccatatttcgtttatcgcaaaaggacaaggattgttaccaagttgaaatttaatatggatcatctattgacagttgtccagagtactgggagaagagaatacagatggagcgggttgaacgtgttcgtctggctaaggaacactgggagtcacagtgcagggcattcttgggcatgtgattctaaagttggtggattttttttttctttagaggggcttcatatgtgatgtatagtttcttgacaaaatggaatttgccatttgttgtcacttatatcctgctctgttgctcctctttgtgtaagaagttggatttgtcatcctaaatgcaaaaacagcaggggttgttcactactgtgcacttagatgtaaatagggtagatttgtagtcattgttcaagtgcataactgtaaattcatttatatttgatcagt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0673200, RefSeq:Os07g0673200