Os07g0679500

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0679500| Description = Similar to Transcription factor RF2b| Version = NM_001067176.1 GI:115474084 GeneID:4344292| Length = 4142 bp| Defin...")
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Gene Name

Os07g0679500

Description

Similar to Transcription factor RF2b

Version

NM_001067176.1 GI:115474084 GeneID:4344292

Length

4142 bp

Definition

Oryza sativa Japonica Group Os07g0679500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29439955..29444096

Sequence Coding Region

29440302..29440690,29441220..29441304,29441992..29442124,29443530..29443901,29443957..29443970

Expression

GEO Profiles:Os07g0679500

Genome Context

<gbrowseImage1> name=NC_008400:29439955..29444096 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29439955..29444096 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctgcggcggcggcgcgccagatctgaggtggccttccgcttcccggacgacctgggcctcgggggcggcgcggacggcgggggcttcgacgagatcggctccgaggacgacctcttctccaccttcatggacatggagaagatcgccggcgccgaccgcgaccgcgccgccgagacctcctcccctccccgccccaccaagcaccgccacagcgcctccttcgacggcttcgccttcggggccggtgcgggtggccccggccctggccttgggaagcagcaagacggagcaggaggcgtgttctccgaggttatggaggctaagaaggccatgtcctccgagcagctggccgagctcgccgccatcgaccccaagcgcgccaaaagaattctagcaaacagacagtctgcagcccgatcaaaggaaaggaaggctcgatatataacagagttagagcggaaagttcaaactcttcaaactgaggctaccacactgtcagcacaactgacactatttcagagagacacaaccggactttctgcagaaaatgctgagctcaagattagattgcaagccatggagcaacaggctcagctgcgtgatgctctcaacgatgcactgaagcaggaagtggagaggcttaagattgctacgggtgagatggcaaagtcaaatgatgcgtataatacaggaatgcagcaggtcccgtacagcccttccttcttccagctatctgaccaacacgcagttcagcaccatgcaggcgttcagcagctgccacatcaattccaacaacctcatccaagtgtccctagccaccagatgctatcccacccaaattccctctctgatatgatgcagcaagactcgcttgggcggctccaagggctggacattggcaaaggaccagtggctgtgaaaaatgaggcagaggtagtggtgaagtctgagggtagttcaatatctgcaggtgaaagcaacagcacattctaa</cdnaseq>

Protein Sequence

<aaseq>LRRRRARSEVAFRFPDDLGLGGGADGGGFDEIGSEDDLFSTFMD MEKIAGADRDRAAETSSPPRPTKHRHSASFDGFAFGAGAGGPGPGLGKQQDGAGGVFS EVMEAKKAMSSEQLAELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQT EATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQEVERLKIAT GEMAKSNDAYNTGMQQVPYSPSFFQLSDQHAVQHHAGVQQLPHQFQQPHPSVPSHQML SHPNSLSDMMQQDSLGRLQGLDIGKGPVAVKNEAEVVVKSEGSSISAGESNSTF</aaseq>

Gene Sequence

<dnaseqindica>3407..3795#2793..2877#1973..2105#196..567#127..140#gtggttctcttctcacaggtagaaggaagcaatggcgatgccgcccaagcccggcgatcagccctccccggggcggagccccaaccccaacctcaacctcccctgcccgctcccgcccatccctagctgcggcggcggcggcggcggcgccgggcccacgccgccgccgccgccgcctccgccgcaccaccggcgcgccagatctgaggtggccttccgcttcccggacgacctgggcctcgggggcggcgcggacggcgggggcttcgacgagatcggctccgaggacgacctcttctccaccttcatggacatggagaagatcgccggcgccgaccgcgaccgcgccgccgagacctcctcccctccccgccccaccaagcaccgccacagcgcctccttcgacggcttcgccttcggggccggtgcgggtggccccggccctggccttgggaagcagcaagacggagcaggaggcgtgttctccgaggttatggaggctaagaaggccatgtcctccgagcagctggccgagctcgccgccatcgaccccaagcgcgccaaaaggtgacgacacccttcggattctcatgctatcttagacttgatttgctggttggtaggattattggtacctcttgcttttgatgaccaaccaacgaaatatatatatatatatatatatatacatttattgtgtttactcttgaattagtgagactttattgtctagatatagcattagattttgcaagcaaagaaaggtggtagaaaaataaatgttaacagaaacaaatcatttcatagtctattgaggcccaatatatggtgctagtggtctggaatctctatggatagtgaaaggcagcttgtacgataggactgcagcaacctgaccaactgaattggatgtcctgaaggtctcgccttcctcgcttacgcgggcttctttttggaacgtaagcactcatagaggtggttgaaatgccaatttcttgtttggcaagttgctttcttggaccaaaaagccaatccatgttgttttgttccaaaataagaaggccttggagcgaacgacatatgttcgttatgtgcaataattttatatttactatgcaacacttattagctataaattctctacccaaaactgtttcttttatcaaactattgtgctgcaaccaagttatacaatatttttttttgcggggaagttatacagtatttaactgcgtatattcattatatagggtttaattcatgtcacttagtaaaacctttcctcatttggccccacattctcttctctcttcaacagtattttataacaaaatatgcttctgtatgtgatgaaactgcatataataattttacttattcaatgataacatggttgcaatgtcaacactgttctattttgtggtttgtcttagaacaaaaaactgcatcactttgtttagtctttaaataagctgtgagcgcaaggcgaacggggcagtagtgggaagcactttgcttttgtgtttcttaagcatgcactcttctgatactctttcccccttttctcaaggccttctttatttcatacctaagggccatatatgcagtgaacttagcatggtccactttcttaaatatgtttttctatttgaaaataacagagatatttttttccattagagaatcaccatgtagtggtcttttaatcaaaatgctgtactacaatcaagactgttaacgcacaggttcatggtgtacggtcatatatgcaactggtactataagagcaaacttttgtgcatagctctacaacttatgtagtaataatcattatattcaaagacagctctcctcgatttaattaaccatttgaactttataatgttaactaaatcatttttagcaagtgcattgtatcagctttctgcagctcatgagtaaatgtaaaatttctgagcttgctttggtgcagaattctagcaaacagacagtctgcagcccgatcaaaggaaaggaaggctcgatatataacagagttagagcggaaagttcaaactcttcaaactgaggctaccacactgtcagcacaactgacactatttcaggtaccttttatccatttgtttgtctcatgggttgcagtactactactatgtttagttcatcagtgcaaaaacaataatgtgcatagtaaatgtgccttttgaactgtattgaacaggcagttgtgccacttactagtacatgtgctaaccaaactgcaacttctttacaattaagtggatcatccattagtagaacaatttatttgaactgatgcatatgccatgataactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatggatctagacatatatccatctagattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtataacacatgataggattatgtgactagctttatgctcatattggctatagcacatgttgtggaaaggtcgaattctcatccaaatatattctatatggttggccaataatttgttgagctgaatggtggtacctaacaatgaaaatgtatgctctctattgaccaggactattaggttctagtaacactgtattttttttttactctgttcactgttgaccagtattcaaagtttgtgatcatgcccatatttttgtattaaaagctgtgaatatccttttaagacgttttgtttttctgggcagagagacacaaccggactttctgcagaaaatgctgagctcaagattagattgcaagccatggagcaacaggctcagctgcgtgatggtgagcactctgcccgtacatctcaactcttgattttcgttatttccaataaacttgtgttgaaaggtagctcgttgctgtaggctggctgcatacttttagaagatatcttatcaacatttgctatttcttgtatgtaagacattgtgttatcgtcgttttttaatgcaagttttatcatgcgatctcaatcctttccattgtttactttggtaaatctaatcatttgtgagagctccaacacttagttaccgtttagcttcaatagaaatctttctgcattacttcacaatggaactagctaaaattttgcactgctggtaagtgccatgctctattgctgaacataaacttatactgaaaactgattcatcattttagaggataaagctctgtcatgtaaggaatattgagatttctcaagctattagtattgacattttgaacaacttgtgaacatctgaaacacagcatagattaggatacgtgttgtttttcctgctaatagaaataccatattgtttcgcagctctcaacgatgcactgaagcaggaagtggagaggcttaagattgctacgggtgagatggcaaagtcaaatgatgcgtataatacaggaatgcagcaggtcccgtacagcccttccttcttccagctatctgaccaacacgcagttcagcaccatgcaggcgttcagcagctgccacatcaattccaacaacctcatccaagtgtccctagccaccagatgctatcccacccaaattccctctctgatatgatgcagcaagactcgcttgggcggctccaagggctggacattggcaaaggaccagtggctgtgaaaaatgaggcagaggtagtggtgaagtctgagggtagttcaatatctgcaggtgaaagcaacagcacattctaattatagacctacatgtcaacaaattgctccgtccgtttagttttctttgttcatagtctgacatgccttcctgaactgcttccctctctcccactagtttttttttttcaattcaattctttcaattttagttacattgtttgtttgttgatcatcgtgtggctgatcatgtagagacttagatatgctcgtttggaaacatcgggtttatttcttgtgtgttgtgtgttgtttgatttagggggtgaggggcactgagtgggtttccagtgacttttatgtattcttttagttatgttgtagacttgttgtctttgaaaatatgtacatttttgtgttactatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0679500, RefSeq:Os07g0679500