Os07g0686400

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Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0686400| Description = Similar to Centromere protein-like protein (Fragment)| Version = NM_001067218.2 GI:297607819 GeneID:4344336| Length ...")
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Gene Name

Os07g0686400

Description

Similar to Centromere protein-like protein (Fragment)

Version

NM_001067218.2 GI:297607819 GeneID:4344336

Length

4314 bp

Definition

Oryza sativa Japonica Group Os07g0686400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29816140..29820453

Sequence Coding Region

29816140..29816457,29817266..29817472,29817674..29818947,29819035..29819633,29820107..29820453

Expression

GEO Profiles:Os07g0686400

Genome Context

<gbrowseImage1> name=NC_008400:29816140..29820453 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29816140..29820453 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaaggttctttttctttggatcatccaccgcaagcactgggaatggtggtaaaacaccaagtgacgatgatagcaggattaagaagaaggcattggacggaggtgacagcaatggcagctccagttccgcttccaattcccctgtcacaaaagtgtgtagatcaaagagccggcgtcgaaatctgaacaatgaggaaccatctaatccgaagcagctcaggaggtctatgtccttctcatcaccagccggcaacagtttcttgaaggatcggagcttcagcttctcgggtgatgtcccatcttctctgtttaatgaatctgatgcacccgatcatgttgctaactgctatgcatggtcaccaaaaaggcgtccagccccaagagaatacacaataaaggatccaaaagcacattcagtcctgcaaagtgactctcctggttcgagatgctattcatgctcaacagggcactctcctgttagttctcccattgccattcgatgcaggtcaacaagactaaccaatttattgaacaagaatgaagttctagatcgatacattgatggagagcaggaagccaccatccttggtgagagacagaagcaaaactctcccaccagatctgcggtttcgaatttgggaaggccgcctcgaccgcagtctacagtaccatctttgccaagactaacaaaagagatccttgagacttacccatatgaggatgtaaaggatgaacatctccaccaactagctcaagaggatacaagagacacatgcaagattacaacactgtgcaatgcaagtagaaaccatgcaggtctgctagatgcttctgagagattttcacatttagaagattacaaatcggaaagtgttacttctgttgaagatatctatgaggatttgcaagactttaatcatccctccatcgatcctacttcagaggatgtagaaactgatgacaagttgctccaaagggcaaaagaggttgaggcaaagttcatggtctcttctgaaaaaaaatatgagcttaacatgtccaaaaacaagaggctaagcgcaaatgacatgttccagatgatccaatgtttgactgaagataggaaacaactagcatatgaattgtcttcacagatcaaggcacgccttacagaaaggtttgctgccaaagagcaatgcaaaaatttgaagaaagagttggacatcagaactagaaggctagagaaggaaaagatggaagtgcaaactactttggagaaagagatggatagaagatcagacgattggtcaatcagactatcaagatttcagtgcgaggaagagagattacgtgatcgggtgagagaacttgcagagcagaatgtctcctttcagcgagaggttacttttcttgaagcagaaaaggttgatgcttctaataaggttgcttgtttggaaatgggaaacaaaaaactaattgatgagctagagaaagtcagaaacaattgtgacaatctccagaattcatctgtagagttacatgattgttttactaaggctgtggaggaaaaagatcatctcaggaaattcttggaagataaggatggtgagaacaaagcattgcataaagtgatttcaaggctacaaaccatatgcaatgaacaagaaagaacaatcagtggcttaagacagggatacagtactgaattagataagaaatctgttgagtgcagtgacaagataaagaagagaatgcaaatggaacttattagactgacaggagttgagcagaagttaagaggtgaagttcaatcttgtcatcttgaatcagagtccctaaggcaagagaacattgcacttttaaatcgtatacaaagtactggaaatggaccgcgcttgtcctcaattcgtcttgaccaggagctactagccagagtggataacttgcagatacatggcttgtcattgcttgataagactagccaactgtgcatcaaattgttggaactaatgaaatgcaaaaggcatgaaaatgaagctggcaatggcatagctgcattaactgtcactgactacactttggagttccagagcatcaaaggacgaatccagagtctgaagcaaagtttggggattattagttctgtcctcactgaaaaggaaaatataaagggaagttctggagagactgtagttggatctagtccttccagggagcacacagatgagttacctctggatattcctgaactcaagctgaaagaagaggctatactcaatagagtgctaaaggaggctctcctttcaaaggaacttgatgttgaacaattagagtcagatctggcatcttcacttcgtatacaggatgtcatgagaaatgagatccagagagttcaggacgaactatcttgcatgaaccacaaggctaagcacttggagcttcagggcttgaagaaagatgagatcattagtcaggtccagctggatttccaggaatctgcaaaggagattagtgcccttagaggaacgctgaaaacagtaactgatgagagggaccttttatggcaggaagcaaagcagctgagaaaaaccatcagcatcatgcaaaatgagactgcctcactaaagaagaaaattgaagcccttgaggaagacatacttgttaaggagggtcagatatcaatactacaagataacatcaagaatcctcaacttgacttcatctgcagtcctagatcagtgaaggagtttggcctggagtga</cdnaseq>

Protein Sequence

<aaseq>MRRFFFFGSSTASTGNGGKTPSDDDSRIKKKALDGGDSNGSSSS ASNSPVTKVCRSKSRRRNLNNEEPSNPKQLRRSMSFSSPAGNSFLKDRSFSFSGDVPS SLFNESDAPDHVANCYAWSPKRRPAPREYTIKDPKAHSVLQSDSPGSRCYSCSTGHSP VSSPIAIRCRSTRLTNLLNKNEVLDRYIDGEQEATILGERQKQNSPTRSAVSNLGRPP RPQSTVPSLPRLTKEILETYPYEDVKDEHLHQLAQEDTRDTCKITTLCNASRNHAGLL DASERFSHLEDYKSESVTSVEDIYEDLQDFNHPSIDPTSEDVETDDKLLQRAKEVEAK FMVSSEKKYELNMSKNKRLSANDMFQMIQCLTEDRKQLAYELSSQIKARLTERFAAKE QCKNLKKELDIRTRRLEKEKMEVQTTLEKEMDRRSDDWSIRLSRFQCEEERLRDRVRE LAEQNVSFQREVTFLEAEKVDASNKVACLEMGNKKLIDELEKVRNNCDNLQNSSVELH DCFTKAVEEKDHLRKFLEDKDGENKALHKVISRLQTICNEQERTISGLRQGYSTELDK KSVECSDKIKKRMQMELIRLTGVEQKLRGEVQSCHLESESLRQENIALLNRIQSTGNG PRLSSIRLDQELLARVDNLQIHGLSLLDKTSQLCIKLLELMKCKRHENEAGNGIAALT VTDYTLEFQSIKGRIQSLKQSLGIISSVLTEKENIKGSSGETVVGSSPSREHTDELPL DIPELKLKEEAILNRVLKEALLSKELDVEQLESDLASSLRIQDVMRNEIQRVQDELSC MNHKAKHLELQGLKKDEIISQVQLDFQESAKEISALRGTLKTVTDERDLLWQEAKQLR KTISIMQNETASLKKKIEALEEDILVKEGQISILQDNIKNPQLDFICSPRSVKEFGLE </aaseq>

Gene Sequence

<dnaseqindica>3997..4314#2982..3188#1507..2780#821..1419#1..347#atgagaaggttctttttctttggatcatccaccgcaagcactgggaatggtggtaaaacaccaagtgacgatgatagcaggattaagaagaaggcattggacggaggtgacagcaatggcagctccagttccgcttccaattcccctgtcacaaaagtgtgtagatcaaagagccggcgtcgaaatctgaacaatgaggaaccatctaatccgaagcagctcaggaggtctatgtccttctcatcaccagccggcaacagtttcttgaaggatcggagcttcagcttctcgggtgatgtcccatcttctctgtttaatgaatctgatgcacccgatcatgttgctaagtaagtgattggtttacattttgattaccatcaacagttcaatagtgcattgaaacctaggatgtttttgccatcatcaaaccaatacatggtagcaacaccctattcccttttttatccatattagtagaaacaagaaaaggagaagtattgtgcacttgcaaactttactcatttcagcttatcagctataattgttaaatgcttaattatacggtggtgattgccctccttataaattgttcagccaatgcactcagagctttctttaggcatttcagttacttgtaaatcccattttcccaatgtaattcttcactcatttcaactagaatagttttagatggacctgcaatcctcactcattaagtgaattatgtgcaattgtgactctaccatttcctttcatctgagtgatgataataaagtgtgtattttttttgctggtcctaacagtgcgtactgacttgcagctgctatgcatggtcaccaaaaaggcgtccagccccaagagaatacacaataaaggatccaaaagcacattcagtcctgcaaagtgactctcctggttcgagatgctattcatgctcaacagggcactctcctgttagttctcccattgccattcgatgcaggtcaacaagactaaccaatttattgaacaagaatgaagttctagatcgatacattgatggagagcaggaagccaccatccttggtgagagacagaagcaaaactctcccaccagatctgcggtttcgaatttgggaaggccgcctcgaccgcagtctacagtaccatctttgccaagactaacaaaagagatccttgagacttacccatatgaggatgtaaaggatgaacatctccaccaactagctcaagaggatacaagagacacatgcaagattacaacactgtgcaatgcaagtagaaaccatgcaggtctgctagatgcttctgagagattttcacatttagaagattacaaatcggaaagtgttacttctgttgaagatatctatgaggatttgcaagactttaatcatccctccatcgatcctacttcaggtatcaactcaagatgctatattaccatactcttctatatatgattgcccaacaatttttctgatattggcttgtattttgcaacagaggatgtagaaactgatgacaagttgctccaaagggcaaaagaggttgaggcaaagttcatggtctcttctgaaaaaaaatatgagcttaacatgtccaaaaacaagaggctaagcgcaaatgacatgttccagatgatccaatgtttgactgaagataggaaacaactagcatatgaattgtcttcacagatcaaggcacgccttacagaaaggtttgctgccaaagagcaatgcaaaaatttgaagaaagagttggacatcagaactagaaggctagagaaggaaaagatggaagtgcaaactactttggagaaagagatggatagaagatcagacgattggtcaatcagactatcaagatttcagtgcgaggaagagagattacgtgatcgggtgagagaacttgcagagcagaatgtctcctttcagcgagaggttacttttcttgaagcagaaaaggttgatgcttctaataaggttgcttgtttggaaatgggaaacaaaaaactaattgatgagctagagaaagtcagaaacaattgtgacaatctccagaattcatctgtagagttacatgattgttttactaaggctgtggaggaaaaagatcatctcaggaaattcttggaagataaggatggtgagaacaaagcattgcataaagtgatttcaaggctacaaaccatatgcaatgaacaagaaagaacaatcagtggcttaagacagggatacagtactgaattagataagaaatctgttgagtgcagtgacaagataaagaagagaatgcaaatggaacttattagactgacaggagttgagcagaagttaagaggtgaagttcaatcttgtcatcttgaatcagagtccctaaggcaagagaacattgcacttttaaatcgtatacaaagtactggaaatggaccgcgcttgtcctcaattcgtcttgaccaggagctactagccagagtggataacttgcagatacatggcttgtcattgcttgataagactagccaactgtgcatcaaattgttggaactaatgaaatgcaaaaggcatgaaaatgaagctggcaatggcatagctgcattaactgtcactgactacactttggagttccagagcatcaaaggacgaatccagagtctgaagcaaagtttggggattattagttctgtcctcactgaaaaggaaaatataaagggaagttctggagagactgtagttggatctagtccttccagggagcacacagatgagttacctctggtatgagcacctattatgttttactgtaaatctttttctgttcaatcaagttttttttcctttttggttggaataagaaaagacaggggagcactcagctggaaaaataattagtgtagtataatatgtgttataagttcagcaggtgcagaaccttgactccttgagcctttgtttaccaccatcttattcttattgtaggatattcctgaactcaagctgaaagaagaggctatactcaatagagtgctaaaggaggctctcctttcaaaggaacttgatgttgaacaattagagtcagatctggcatcttcacttcgtatacaggatgtcatgagaaatgagatccagagagttcaggacgaactatcttgcatgaaccacaaggctaagcacttggagcttcaggtagatttttcctacccttattccccaacaaaacccttctttgaaacaatgagttcccttgtcatgctgttttactgtattatcctgaagaaaaatctattttgttattttttaccttcaactagtcctctggtttggttgtgaaaatatgaaatgtgcttttgtcttactaagaatcaacttatgactttatacgtgtgctacaagggacatgtttaacactaatgaaatcagacttcatatgacctaaaccgtaaatattagtgacaatctgagagaaaaaggtcatctgttagtattggagcttaggtcagtaacggaagctcttcaatttgcctcttgataggttcttcaactgaggtgtttcagattattgtagaagaagttccaaagttttaagactctgaattagcgtatgaaattatgcgagtttttagtggcttctggtcaacaagaatatcagtatcagctcacggatcataaaataaatgcttagacaaactgactataaatggtaaatgagattacaatgtgatattctttgttatactaagtgaagcatgaaaattcaccagggtccttaaatcagtttatgtatagagacagtctataatctgacatttagcatgttatttgaccagtaccaggagcctctagtggtgtaacttgcaaggcgtgtgaaaattctctatgtcggattatatgcttatgatcgtccttttgtattagtggcatttttttcccatgcactcctttagaacctacaatttgtataccttgtttgtttacatacttgttgcactagcagggcttgaagaaagatgagatcattagtcaggtccagctggatttccaggaatctgcaaaggagattagtgcccttagaggaacgctgaaaacagtaactgatgagagggaccttttatggcaggaagcaaagcagctgagaaaaaccatcagcatcatgcaaaatgagactgcctcactaaagaagaaaattgaagcccttgaggaagacatacttgttaaggagggtcagatatcaatactacaagataacatcaagaatcctcaacttgacttcatctgcagtcctagatcagtgaaggagtttggcctggagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0686400, RefSeq:Os07g0686400