Os08g0101800

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0101800| Description = Protein of unknown function DUF821, CAP10-like family protein| Version = NM_001067299.1 GI:115474334 GeneID:4344422| ...")
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Gene Name

Os08g0101800

Description

Protein of unknown function DUF821, CAP10-like family protein

Version

NM_001067299.1 GI:115474334 GeneID:4344422

Length

5149 bp

Definition

Oryza sativa Japonica Group Os08g0101800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:101232..106380

Sequence Coding Region

101601..101936,104607..106010

Expression

GEO Profiles:Os08g0101800

Genome Context

<gbrowseImage1> name=NC_008401:101232..106380 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:101232..106380 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggggaagtagcaataatcacaagtcgaagtcggaggaggaaggcgtggccttggtgcaggtagcggaagagggcgagacgacgacgaagcagcagcagcagccggactcaaataaggcggcggcggaggaggaggaggaggaggccggctacggctacagcaattggtggtcaacgtgggtgtcgtcggcggtgaagaagcgagtgcgggcgccgggtcgcgtgggtatcgtcgtcgtcgtcggcggattcgtcctgctggccttgctcgccgccgtcgccgccaccaccaccaccacctggccgcaactcgtcgatttcaccggcgccgtttcgtcgttcctgcagtttggcaatggtgacggtgcacggcgccacaggcctcaccgcactagtctcgtttccattccaattccattcacctgcggcagcggcaatgacacgggcacatgcccccgctatgcggcgtcagctccggcgccggcgcctgcatcgatgtcgccgccgccaccacagacgtcgacggtggattactgtccgtcctacttccggcacatagagctggacctggcggcgtggttggcgtcaggcatcagtcgggaggcggtggagcgggggcggcggcaggcgcacttccggctgctggtggtggggggccgcgcctacgtggagacgtaccggcgtgcgttccagacgcgcgacgtgttcacgcagtggggcatcctccagctgctccgccgctacccggggcgcgtccccgacctggacctcatgttcaactgcgacgacatgcccgaggtgcgcgccgccgcctaccccgaccgggccgccgcgccgcccctcttccgctactgcaaggacccctccaccctggacgtgctcttcccggactggtccttctggggatggccggaggtgaacatccggccatgggcgccgctgctcgcggagatggcggaggagaaggcgcggctgccgtggagccgaagggagccctacgcctactggaagggcaacccggacgtgtcgccgctgcggcaggagctcctccgctgcaaccactccctcccccccgacgacacggtcaggttgtaccgccaggactggggcttcgccaaccgcaacgccttccgcgactccaacctggcccgccagtgtcgccaccgctacaagctgtacgtgcagggccgctcctggtccgtcagccgcaagtacatcctcgcctgcgactcgcccgtcctcgccgtcgccacgccctaccaggacttcttctcccgaggcctcgccgccggcaagcactactggcccatcgacccctcccgctccaagctgtgccgcgacatccgcttcgccgtgcgatggggcaacgcccacccggcgcaggcgcagcgcatgggcctcgccggcagcgccttcgccacggacgacatggccatggactacgtctacgactacatgctgcacgtgctcacgcgctacgcctcgctgctccgctacaagcccaccgtgccggaccgcgccgtggagctgtgcccggagtccatggcgtgcccccgccgaggccgcgaccgcgacttcatgatgcagtccagggagcagtacgtggccgactaccagccctgcaccattccaccgccgccgctcaccgccgatgacgccaccaacatggcccacagggatgccgaggtgctcagcaacatcgacaagatgatcataacggaggacaagcacaattaa</cdnaseq>

Protein Sequence

<aaseq>MRGSSNNHKSKSEEEGVALVQVAEEGETTTKQQQQPDSNKAAAE EEEEEAGYGYSNWWSTWVSSAVKKRVRAPGRVGIVVVVGGFVLLALLAAVAATTTTTW PQLVDFTGAVSSFLQFGNGDGARRHRPHRTSLVSIPIPFTCGSGNDTGTCPRYAASAP APAPASMSPPPPQTSTVDYCPSYFRHIELDLAAWLASGISREAVERGRRQAHFRLLVV GGRAYVETYRRAFQTRDVFTQWGILQLLRRYPGRVPDLDLMFNCDDMPEVRAAAYPDR AAAPPLFRYCKDPSTLDVLFPDWSFWGWPEVNIRPWAPLLAEMAEEKARLPWSRREPY AYWKGNPDVSPLRQELLRCNHSLPPDDTVRLYRQDWGFANRNAFRDSNLARQCRHRYK LYVQGRSWSVSRKYILACDSPVLAVATPYQDFFSRGLAAGKHYWPIDPSRSKLCRDIR FAVRWGNAHPAQAQRMGLAGSAFATDDMAMDYVYDYMLHVLTRYASLLRYKPTVPDRA VELCPESMACPRRGRDRDFMMQSREQYVADYQPCTIPPPPLTADDATNMAHRDAEVLS NIDKMIITEDKHN</aaseq>

Gene Sequence

<dnaseqindica>370..705#3376..4779#agctagatgtagcttaattagctagctagccgctcaagtcatatatatatatatatatgctagctagagggaagacgaaggagttagctagctaggagagggcgagagatgagcagcagctagaagcagctgatctatctatctatctatctatctatctatctatctatctatgtagagctcactcatgtatgcatatatacttggatctcctctcctctccggtcatctcatatatacgtatctatatcgatatagatcgcctgccggtttatagttagatatgcatgtatcgatcgggatactattactaatatatagttagttaaaccaaattaagatcgatcaaatacaatatatcgatcgatcatgaggggaagtagcaataatcacaagtcgaagtcggaggaggaaggcgtggccttggtgcaggtagcggaagagggcgagacgacgacgaagcagcagcagcagccggactcaaataaggcggcggcggaggaggaggaggaggaggccggctacggctacagcaattggtggtcaacgtgggtgtcgtcggcggtgaagaagcgagtgcgggcgccgggtcgcgtgggtatcgtcgtcgtcgtcggcggattcgtcctgctggccttgctcgccgccgtcgccgccaccaccaccaccacctggccgcaactcgtcgatttcaccggcgccgttgtaagtcaagtccctcgctcaattatcatttctttcttcaatatatcaattcgatcgtgcatgcatataccttatataattcattcattcaactccgatgcgatcgatccacttgtttttttttaccgctagcagctagcgacgatgcacgtacgacgcacgaccacaggcccaggagttatatttatttattagttgatgaattgaaattagtatatacgaaactttaatttgtcgctcaaatcagcctcaattaaaatttcaacatatattggggttaacaaatttattttggtggagttttttcttctgagagaaagaactttccaaattatattatataaggtatgtaataattaattgtgatcaagattatatttagtttttttactctaccaaaatttagtaacgatgaaatttggtaaagttgtgaacacatgccgaccggccggccataatttccaagtttgacgtcaaacaccgtacccaatacaatctagctagttttatttggtttagcacctggattactagctaattactagtggtaactaacttacagcatgctcatgctgtcacgcattgaatgttgactagcttaattcttctttccaccaacaaatgaccacatcatatatagctagctacagatccacggaaactagctagcgctgcttgttagtgcgcatttccattttccaccctctatattaatttacacatgtatacacctgaatcaacacgcttcgatcaatggatatgcatcttaaattaattaatttcacccaaattgtattttgtatgcatatatatatgcatgcatatatagttgggcttataactgtacttgtagacgactgacagatcaattaatataatatagatagctagatggatatatagatccaatagaaagcaagcaaagccatgcaagcagtatggtccgtgttcacgacgaaagtgcttgatcacgagatacacggcactgtagctagtttgttaagctaagctggagtagttgattaactcctggggatattaagcttagtagtactcgctccatgtccaacaccgttgattttttaaacaatgtttgacatttatcttattcaattttttttacaaatataaaaataccatgcttaaagaataaatcaagtcacaataaaattaatgataattacataatttttttaaataaattgaatggttaaacgctgataaaagattaattgtattatatattaaaatacggagggagtatatattaatcctatcaaaagactactgcatcagatatatttataacgagtgaaaaaacactactagtacatataattatgttactattactagtggttctatggttctgcggcgcgcgccttggtttttcacaaggaaagtaaaccagatgatcatgcatcacaacgcactataaatcgccaaaaacagtagtagtacataaatgcatgcatgtagtttacttaattttgaacacacatatttattgattaaaaatagtactccaattgtaggacgtcctatttttaagaaaaattaaactcggtaacttttaactaataatctaactatgtactacatatactaattattatgcacgttatatcactagattcatattttaaagtactttcttgtgatgctagttgcatgtttgttgaaaacatagattgaaataaattaatggtcaaagtatgttattaaagagcgtgtaaaaaaatataggcattataatttaagacggagctaggagtatatgtttccattagagatacaaaattaaaaggagacacttcattacttatgacaaattaacccctcattagttagaatttatagtgaaattaagattaagggtagtataataattacgtaatgcgcgtatatggttggttgtttttagcctaagtatatatatacgtgtatgaatgatataagttcttcgaggctagctgttgagttgagtcaactgcgtacgttgtaagtacatagaatatataaggatgcatgacgttactactcaccgctgtacgatctcaggttggaataattcatttactaacaaaaccgcgcgttgaaattaagcgccacaacatgtggaaaaacttgttcgacttttaatttggctcgcagactttgagcgatcgaagaactagatagctaagcgagctagtgagtacgtgtccaatccatcacaatcgatgatggttgaataaacatacattaggccattatcatcttgacctaaagtgattttaatttaacaatatttgaagctgtgcgcttccgatggagatcgacaaacaacggcttccatacggcaacttaataaatttgatggagatgtatagctgtacctgttgctcgtcgattcgtcgtcttggtcgtgcatgcatcaatggaattacaaccactcttccttacaactagctagtcttggtcgcccgtcatgcttaatttgcatcaatggaattacaactagactttactactattaattaattcctcactaattaagtaataaatagtagtactggttattttacctaatcatctatacttagctagtatctgaccgattatatattagttaattaataaatttaatcattttctgtactgtacatgcatgatggatggatggagcagtcgtcgttcctgcagtttggcaatggtgacggtgcacggcgccacaggcctcaccgcactagtctcgtttccattccaattccattcacctgcggcagcggcaatgacacgggcacatgcccccgctatgcggcgtcagctccggcgccggcgcctgcatcgatgtcgccgccgccaccacagacgtcgacggtggattactgtccgtcctacttccggcacatagagctggacctggcggcgtggttggcgtcaggcatcagtcgggaggcggtggagcgggggcggcggcaggcgcacttccggctgctggtggtggggggccgcgcctacgtggagacgtaccggcgtgcgttccagacgcgcgacgtgttcacgcagtggggcatcctccagctgctccgccgctacccggggcgcgtccccgacctggacctcatgttcaactgcgacgacatgcccgaggtgcgcgccgccgcctaccccgaccgggccgccgcgccgcccctcttccgctactgcaaggacccctccaccctggacgtgctcttcccggactggtccttctggggatggccggaggtgaacatccggccatgggcgccgctgctcgcggagatggcggaggagaaggcgcggctgccgtggagccgaagggagccctacgcctactggaagggcaacccggacgtgtcgccgctgcggcaggagctcctccgctgcaaccactccctcccccccgacgacacggtcaggttgtaccgccaggactggggcttcgccaaccgcaacgccttccgcgactccaacctggcccgccagtgtcgccaccgctacaagctgtacgtgcagggccgctcctggtccgtcagccgcaagtacatcctcgcctgcgactcgcccgtcctcgccgtcgccacgccctaccaggacttcttctcccgaggcctcgccgccggcaagcactactggcccatcgacccctcccgctccaagctgtgccgcgacatccgcttcgccgtgcgatggggcaacgcccacccggcgcaggcgcagcgcatgggcctcgccggcagcgccttcgccacggacgacatggccatggactacgtctacgactacatgctgcacgtgctcacgcgctacgcctcgctgctccgctacaagcccaccgtgccggaccgcgccgtggagctgtgcccggagtccatggcgtgcccccgccgaggccgcgaccgcgacttcatgatgcagtccagggagcagtacgtggccgactaccagccctgcaccattccaccgccgccgctcaccgccgatgacgccaccaacatggcccacagggatgccgaggtgctcagcaacatcgacaagatgatcataacggaggacaagcacaattaaccaataataacatatttcttaattatgtgcttgctgctgtaattgtttccttcatttcataaataaatatgatatattaccacgtgctgttactgtactagtgttgatttagcatgacaaattgaatatccattctcagttattgtatcatgtaggcgcgcacacttaattaaacagaggagaacaaattaaagcggagtacaatagctagctagtttgccaataaagcagagtacgagatctggctagctcctttgcacattcgcaactatattttttatttttcttacagcttgtacaaattaaatttaaacttgtatatttgtgaagtgatatatttcatattaatctatattactaattttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0101800, RefSeq:Os08g0101800