Os08g0103400

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0103400| Description = Conserved hypothetical protein| Version = NM_001067307.1 GI:115474350 GeneID:4344430| Length = 3260 bp| Definition ...")
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Gene Name

Os08g0103400

Description

Conserved hypothetical protein

Version

NM_001067307.1 GI:115474350 GeneID:4344430

Length

3260 bp

Definition

Oryza sativa Japonica Group Os08g0103400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:190246..193505

Sequence Coding Region

190246..190731,191054..191287,192503..192688,193455..193505

Expression

GEO Profiles:Os08g0103400

Genome Context

<gbrowseImage1> name=NC_008401:190246..193505 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:190246..193505 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggccaagcagcagcgggtttaccaagtctggaaaggcaacaacataatcttgtgcggtggaaggtttatctttggaccagatgccaaggccactctgctatctttctctctaattgcaatcccggttgccgtcttctgctactttgtggcgaggcatctcatacacatgtttcctgcatataatgcagggtatgcaattcttgctgttaccatagtcctctcaatttatcgcaattatcgctacttcttctgttttgtatcttcagcagccatcctgtgcatctacatattttcaatgtgcgctttgcacatcaagcttctcatgaatagggatcatcattcagtgataaaggcaattaaagaatctccagcatcagtggcaattatggcatattgtttcatctgtttctggttcgttggtggtctcacagggttccattcttacctcattgcaacaaataagacaacatatgagaacctcaagtacaaatacaacaaccaacccaacgtgtttgaccgtggttgcatgaacaactgttctgaattcttctgcaccaaaagagcgccttcaaggatcaacctgagagcaattgttcaagaggaccatggggtagcaccaccacgaatcagccgttccaatgtagcagaagaggagacaccccaccgtccacgagccaaagtcgaggatgatcttgagatgggcctcgacatccttaagacctcacaacgtcggtcagatgaactgggtgacgaagagttgggagttgaaagcaatggcgtgaaatatcgcagagctgactgctcacctggtttagacaatgagatcccaattacaagaactaagattgagagttctagtgaggttagagatctggagatcttgccaactggcaatgctgcactcccttcatctcctgagaagaaacaacatcctgatgtactttgttga</cdnaseq>

Protein Sequence

<aaseq>MAMAKQQRVYQVWKGNNIILCGGRFIFGPDAKATLLSFSLIAIP VAVFCYFVARHLIHMFPAYNAGYAILAVTIVLSIYRNYRYFFCFVSSAAILCIYIFSM CALHIKLLMNRDHHSVIKAIKESPASVAIMAYCFICFWFVGGLTGFHSYLIATNKTTY ENLKYKYNNQPNVFDRGCMNNCSEFFCTKRAPSRINLRAIVQEDHGVAPPRISRSNVA EEETPHRPRAKVEDDLEMGLDILKTSQRRSDELGDEELGVESNGVKYRRADCSPGLDN EIPITRTKIESSSEVRDLEILPTGNAALPSSPEKKQHPDVLC</aaseq>

Gene Sequence

<dnaseqindica>2775..3260#2219..2452#818..1003#1..51#atggccatggccaagcagcagcgggtttaccaagtctggaaaggcaacaacgtgagtgagattggattactcctcctcctcctccacgatccctctcttctttctttcttgcgcccccgtcccccttcttgtccccataatccgcgcttttcttgggttcggatcgactgttgattttgcccgcttccatttctgtctgtcccgttggcgcctaacatttcgcgatgtgatttgttctaacctgctctgacgaatacttttggggattagataaaggaaactgcttccggcccatatctttgtgtgtggttagctaggctagtttattagttaattggtttgtgcgcctggtttgtactatattttactacactgttgatgagttagatgaataaactatcgttaatcagtttggagctttggggccattctggatgataaccctcttttgtttccaataacataatccaattgggacaggagtcccaaggtcctgtctttctgcagctaattcaacctggcttcaggctgcataaaaaataatgtgctacacttgcaaacattacgttgcttaaatcttctttttactcttctctttagaattattgctttcagcaacttgtcttattcagagttcaggctagtgtaaaaacaatggccttgataggagttctgatggagttggacaactgcagattttacacaatatcatatcaaaccttttaggatttcggaattttcacctttgcttgcagtttataccagcagttaatataaacatttttaatgtgtcatcaacgtgtttctctttgttcagataatcttgtgcggtggaaggtttatctttggaccagatgccaaggccactctgctatctttctctctaattgcaatcccggttgccgtcttctgctactttgtggcgaggcatctcatacacatgtttcctgcatataatgcagggtatgcaattcttgctgttaccatagtcctctcaatttatgtaagtaggctttctgtgcctttgtacttcagaattatgctaaggttcctgtgtaggatttgtcctgtcaccaacaatcatgagaaagcaactttattttagacccttcaacagaaaacctgatgtgattgaaatgaaagatctgttgaaagctgctaactatccatatggaacaaataatataatcatgaatccagcagtattttggaaatttaatattttaacaaattgttgcatcttatctggtaatcagaaatgcagaggtcaatatgttagtaaagctgtagtccttttcatgaggtgaattggtaattcactggggttcgtcatcttcattgccttaaaatgttgtgttgttaatacagttgacaaaagcgctacgagcatagtttcactaatggaaagggatcttataggttccttttagtttatcaagtgatggatcatccgagttgtgattataatgacataccctgtttcaaccttcgatatatctcattaattgatgaaccaaactttttttgtgtgtttaccgagttatcatcttcgatgccctttttagaagatgttcactggattgattgatactttggtcttcatttttctcagtgcaattggtcctcttttcctcttacatatactcagttgtatatattatcatgatcatttatcttactggtctccaaaatttataaaaaatattctatctctagagtgtgtagattgttttatcgtattttatttcacagtactttttacagacaccgccaaaatcataggatccttctctgcaaaacctgattgttaggtactgttactgctcttcttgacctcatctcaagatccaggtattgtaccacggaactcacatccacctgtggaagagttttctcatgatgcttcagctccacacactcttcagtttccacgggtcaaggagattttggtcaatggtgtacccgtgaaagtaaaatactgtgacacttgcatgatatatcgacctccgcgctgctctcactgttccaaatgtgataactgtgtcgagcgctttgatcaccactgtccttgggttgggcagtgcattggacaggtctgttatgtttaatttcttttcaaaataaaataatccagctatgggtggctttagtttctacaccctgacagctgttcatatgaaaccatctcagttaatatgcttttatttcccctttgcagcgcaattatcgctacttcttctgttttgtatcttcagcagccatcctgtgcatctacatattttcaatgtgcgctttgcacatcaagcttctcatgaatagggatcatcattcagtgataaaggcaattaaagaatctccagcatcagtggcaattatggcatattgtttcatctgtttctggttcgttggtggtctcacagggttccattcttacctcattgcaacaaataaggttagtactccaattatacagagtgaatggtaaagtataaaatgtgtagcctttctgctgacaaaggtatataggtcacctttaaatatcatgcagaaggtttgtatgtagttatgtacataaccacaggtccgaaatgcctacctgctattttgaatttagtgcactagtgatcaagtcaaatctcactggatgaatttttattgagaatagaaatggaattaagtattgcaatgatgcatcatgtacactaattctttcttgcatttatgaaaaattgaaaactatgatctgaattgaatttccacttccttttttgaagacaacatatgagaacctcaagtacaaatacaacaaccaacccaacgtgtttgaccgtggttgcatgaacaactgttctgaattcttctgcaccaaaagagcgccttcaaggatcaacctgagagcaattgttcaagaggaccatggggtagcaccaccacgaatcagccgttccaatgtagcagaagaggagacaccccaccgtccacgagccaaagtcgaggatgatcttgagatgggcctcgacatccttaagacctcacaacgtcggtcagatgaactgggtgacgaagagttgggagttgaaagcaatggcgtgaaatatcgcagagctgactgctcacctggtttagacaatgagatcccaattacaagaactaagattgagagttctagtgaggttagagatctggagatcttgccaactggcaatgctgcactcccttcatctcctgagaagaaacaacatcctgatgtactttgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0103400, RefSeq:Os08g0103400