Os08g0108200

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0108200| Description = G-protein, beta subunit family protein| Version = NM_001067339.1 GI:115474414 GeneID:4344464| Length = 4871 bp| Def...")
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Gene Name

Os08g0108200

Description

G-protein, beta subunit family protein

Version

NM_001067339.1 GI:115474414 GeneID:4344464

Length

4871 bp

Definition

Oryza sativa Japonica Group Os08g0108200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:394230..399100

Sequence Coding Region

394336..394449,394573..394684,394804..394830,395134..395206,395305..395408
,395491..395705,395776..395875,396086..396152,396975..397063
,397157..397295,397404..397504,398268..398435,398649..398857

Expression

GEO Profiles:Os08g0108200

Genome Context

<gbrowseImage1> name=NC_008401:394230..399100 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:394230..399100 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggcggcacggtgcagatcaactggcacgagcagcagccggtcctcaccctcgacttccaccccgtctcccgccgcctcgccaccggcggcagcgaccacgacatcaagatctgggtgattgcgtcggatgattccgacaagaagctccccactgccacctaccacagcagcctctcctcccacagctccgcggtgaacgttctccgcttctcgccttccggcgaaaatcttgcgtctggtgctgatggtggtggtattatcatctggaagttgcattccactgatgacggcgaggcttggaaagtacaaaagacattattgttccatcacaaggatgttcttgacctgcaatggtcccaagatggcgcattccttgtttctgcttcagttgataacagttgcattgtatgggatgctattaaaggttcggtgcaacaaaagttggagggtcatttgcattatgttcaaggcgtggcatgggatcctctgggtcaatacattgcttcactgagctctgacagaacttgtagaatatatgcaaataagccccaaggcaagtcaaagaacacagataggatgaactttgtttgccagcatacactggtgaaggccgaacatcaaaatcatgatgagtccaagccaccagttagagctcatttgtttcatgacgaaacgttaccatctttctttcggagattggcatggtcgcctgatggatcttttctggtactgccagcaggtttatgcaaatattcatctgaagtgatcaatacagcttatgtaatgtcaaggagagacttgtcaaggcctgcgatacaactccctggcgcaagtaaagcaatagtggcagtgcgcttttgcccggttctcttcaagctgcgtggttcccaatcagattgtttcttcaagcttccttacagagttatttttgctgttgctactttgaactccctgtatgtttatgacactgaaagtgttgctcctattctaatacatgctggtctgcactatgctgcaattacggatattgcatggtcttctgatgccaagtacctggcagtgtcatcacgagattgcttctgcaccattattgagtttgagaatgaagagttggggctgccctataatctctctggaacaaaggaacttgatgaagggaataccaactgtgagaacatgaagccattaaaggtggacagtatggaaattgatgctggttccagcaaagctaagataaaagccagttctgcagccgttgaagtgacaccatcaccaccagtgctggcccagaacaatatattgatgacaaaggacgttgctgaaggaaatgcgacaagtgaaaatgacaggccttcagcggtggacaatatggaagttgatgttggtgaaaacaaagctaagatggaagtcactcctgtcgctgtacaagtgacagcgccgccagtgtcgaccaagaacagcgcatcaagtaagcctaccaagaagcgaattactcctattgcaatcaactaa</cdnaseq>

Protein Sequence

<aaseq>MRGGTVQINWHEQQPVLTLDFHPVSRRLATGGSDHDIKIWVIAS DDSDKKLPTATYHSSLSSHSSAVNVLRFSPSGENLASGADGGGIIIWKLHSTDDGEAW KVQKTLLFHHKDVLDLQWSQDGAFLVSASVDNSCIVWDAIKGSVQQKLEGHLHYVQGV AWDPLGQYIASLSSDRTCRIYANKPQGKSKNTDRMNFVCQHTLVKAEHQNHDESKPPV RAHLFHDETLPSFFRRLAWSPDGSFLVLPAGLCKYSSEVINTAYVMSRRDLSRPAIQL PGASKAIVAVRFCPVLFKLRGSQSDCFFKLPYRVIFAVATLNSLYVYDTESVAPILIH AGLHYAAITDIAWSSDAKYLAVSSRDCFCTIIEFENEELGLPYNLSGTKELDEGNTNC ENMKPLKVDSMEIDAGSSKAKIKASSAAVEVTPSPPVLAQNNILMTKDVAEGNATSEN DRPSAVDNMEVDVGENKAKMEVTPVAVQVTAPPVSTKNSASSKPTKKRITPIAIN</aaseq>

Gene Sequence

<dnaseqindica>107..220#344..455#575..601#905..977#1076..1179#1262..1476#1547..1646#1857..1923#2746..2834#2928..3066#3175..3275#4039..4206#4420..4628#gcgccaaatccccctcccatttcccgccttccccaatttctcccaaaccctagctagcctttccccaacctagactccttgacgcggcgaggaggaggaggcggcgatgcggggcggcacggtgcagatcaactggcacgagcagcagccggtcctcaccctcgacttccaccccgtctcccgccgcctcgccaccggcggcagcgaccacgacatcaaggtctctcttcacccacctcccttgctccacccccctgcccgatttgctgctctcgatttctcgttgcggtttggatggctttctggcccatttcgtcatggattataatatattggcttgcagatctgggtgattgcgtcggatgattccgacaagaagctccccactgccacctaccacagcagcctctcctcccacagctccgcggtgaacgttctccgcttctcgccttccggtaagcgctgctatgaattgagtttagcactggcaattttctgaatgaaatgctctctatatgttgagaaatttctacatacctaactaagcaaaccttttccgttcggttgttcgcaggcgaaaatcttgcgtctggtgctgatggtacgtttactttagtttttccccctaacggacgcaggggctctatcaattcaatcaagcaaggaaaggatttactagtcctgctggagtgtttgaattccactaaacaaactgataaataaaggctaattatgttaaactgccacattattttttgccccacctgcgcggaaaaattcatggccatgaatttattacaatgggaataaactgttgtaattaaaaccgtctccattttagctagacaatcaagtagatttgttgtgtccttgctatgcatttaggctattatgtaattgacaggtggtggtattatcatctggaagttgcattccactgatgacggcgaggcttggaaagtacaaaagacattattgtgagagcaaacctctgaaaaaaaatagagaattatttgaattagcccattttattgttgacacttgcttagctgtattctcctaacttatcacataggttccatcacaaggatgttcttgacctgcaatggtcccaagatggcgcattccttgtttctgcttcagttgataacagttgcattgtatgggatgctattaaaggtaaaccctaaaacaagtgatcctatgactgtagcaccatgtttcctctgttatactgatttgtatgcaatttacttctcaggttcggtgcaacaaaagttggagggtcatttgcattatgttcaaggcgtggcatgggatcctctgggtcaatacattgcttcactgagctctgacagaacttgtagaatatatgcaaataagccccaaggcaagtcaaagaacacagataggatgaactttgtttgccagcatacactggtgaaggccgaacatcaaaatcatgatgagtccaaggtttgtttaatgtactctgtggcattctttggttattcgttgctctaaattagctacctttatcttgcagccaccagttagagctcatttgtttcatgacgaaacgttaccatctttctttcggagattggcatggtcgcctgatggatcttttctggtactgccagcaggtatagaaatttcccgttagtgctagacttctagtcggcaatacctagttgctctgctaatttctataacgcaaaacaggtcattctaaagtgcattagttatacggtcttgctgcatgtaatatagttcatctgcagtcagtccctgtcatcataccttttatcccatcaacaagttcatttccctaattcaccttttatcttgatcaggtttatgcaaatattcatctgaagtgatcaatacagcttatgtaatgtcaaggagagacttgtcaaggtagaagcacatttaatgcttgaaataacgatgaccttgccttataacgtttaatttgctcctttacatttcaaccatcattactggcaaaatataaagtttttcagatgtttcacaatttagaaactcgtttgttcaggtgttccctgaatggttaaatcagctaacctaagctctaagcttgcacacacaaacatagaattctttataggtagttttatttttacaacaggatacagtaccatggtactaaaagctggaactagcaacctcagtggttcgatttgctccgagtacaaatcacaaaattagaccgtggcaactggctgaatcggatggtttccttgtgaaactggtgaaccaggacatcctaagttggggggttcttgcacaggaacaaaagacatgggtcattgaattgaaggcccaatggttgaccttgtattttaaggcccactaacttcaattatacgtgaagaaagtgtggggtggggatcaatccttggttttggcgggggtgaatgaaaccttcctttgctgaacatagattggttattccaccagaaggtaaacctggagattgagcattcaatggccagtccaacattcttttactatgataaaaacatgctattccctacagatgttcttagctgataaaatggttccacaggaacttatggtatttcatttgtcccacttaattttcaacgtttcattaattatatgtcagaaaaaacatatactttagcatataacctgtataccatatatttagttctgtatttattttaggataccaaccttgttttggtgctacaggcctgcgatacaactccctggcgcaagtaaagcaatagtggcagtgcgcttttgcccggttctcttcaagctgcgtggttcccaatcaggtagctcattttcttttcagctttaccttgcttgaaggttctaattgttttactgatctcttaaaatgacgctgtactatggaactgttgcagattgtttcttcaagcttccttacagagttatttttgctgttgctactttgaactccctgtatgtttatgacactgaaagtgttgctcctattctaatacatgctggtctgcactatgctgcaattacggatattgcatggtgagttttacaatagttttactcctagccttcagtgagcagagaaacttgtcttactggaactaacagttcacgttttctgtttaaaccttttcgcttttttgataggtcttctgatgccaagtacctggcagtgtcatcacgagattgcttctgcaccattattgagtttgagaatgaagagttggggctgccctataatctctctggtatctctttgtcttccctttttttattttgttgggtgtgtttatttaaactttgttgaatggaaaatttatgttagtatccaaaattggatcataatattacttggttgaagttattaccatgtattatcaagtaatattggtgcctgccttttctagagctaatgggtggattatgtatatgtatcaattttccaatttgttctgcttaccatcttctgtcaagatgtgttacgccagtcaggatataaatagttttaatcatatatcttaaatggactcacttgttaatagaaaatggatatttggtagtatgttcacctcttgaaagattattaatatttggtccagccagactcatcagagcagacttctttaggtgactgataactattttacccattctgctgttaacttgtagtggcactttcatttgcctgtgatgcaacctcatggggttccttgttttctgatgtaactcaaagcaaataatgtgttgctaagtaggatgatctctttgattgcatcaggatatgattgttttgtgttcctagtactaattcaaagctaccattgaagtatgcatagcaaatcttcaatctgcttgttttcgatgaatagcataaggcctgctatgaatttattaattgtagttcatgctgagctaaagtacaaggattggatctgtgaaggcttggttgtttgccacgatcattgtttctagtttactgttttattacatgacaattcttcaaaatcctaggaacaaaggaacttgatgaagggaataccaactgtgagaacatgaagccattaaaggtggacagtatggaaattgatgctggttccagcaaagctaagataaaagccagttctgcagccgttgaagtgacaccatcaccaccagtgctggcccagaacaatatattgagtaagcttaagattagttactccactagtttcctacctcatgaatttcgacatctgcagtgatccgcaaatagtggaaagtgcttttagtttactcagtaaataaatttagtttgtggctgtatctgcttcttggatgtgctcgctatctttgtttacttttttttccctcaagacactttccttacacgatttattaattggaaactcacagtgacaaaggacgttgctgaaggaaatgcgacaagtgaaaatgacaggccttcagcggtggacaatatggaagttgatgttggtgaaaacaaagctaagatggaagtcactcctgtcgctgtacaagtgacagcgccgccagtgtcgaccaagaacagcgcatcaagtaagcctaccaagaagcgaattactcctattgcaatcaactaagtaatgcaaagtaattaggacctaggattatgatatcttctgtagtgatagcaagtacaagaatttacatttaggtcaccctgtaaagaaatttattttgcaacgcgtgttcaacttgtggcctaaccccagaaactccggttctgctaatggcacatagtggaagcagttatatggacacagcttgtgtcagtgagcacatttggttataaatcaacttgcagataccagatgtctctattt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0108200, RefSeq:Os08g0108200