Os08g0117200

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0117200| Description = Similar to 40S ribosomal protein S13| Version = NM_001067395.2 GI:297607895 GeneID:4344523| Length = 2368 bp| Defin...")
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Gene Name

Os08g0117200

Description

Similar to 40S ribosomal protein S13

Version

NM_001067395.2 GI:297607895 GeneID:4344523

Length

2368 bp

Definition

Oryza sativa Japonica Group Os08g0117200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:955316..957683

Sequence Coding Region

955606..955639,956840..957026,957127..957265,957370..957442,957543..957565

Expression

GEO Profiles:Os08g0117200

Genome Context

<gbrowseImage1> name=NC_008401:955316..957683 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:955316..957683 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgtatgcacagccgcgggaagggcatctcgtcgtcggcgattccgtacaagaggactcccccaagctgggtcaagaccgccgccgccgatgtggaggagatgatcatgaaggccgcgaagaagggccagatgccgtcgcagatcggcgtggtgctccgtgaccagcacggaatccccctcgtcaagagcgtcaccggcagcaagatcctccgcatcctcaaggcccatggtcttgcgccggagatcccggaggacctgtacttcctgatcaagaaggctgttgctattaggaagcatttggagaggaacaggaaggacaaggactccaagtttaggctcatccttgttgagagcaggatccaccgcctcgctcgctactacaagcgcaccaagaagctcccgcccacctggaagtatgagtcgaccacagccagcactctggtggcctag</cdnaseq>

Protein Sequence

<aaseq>MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKG QMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHL ERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA</aaseq>

Gene Sequence

<dnaseqindica>2045..2078#658..844#419..557#242..314#119..141#ttctctctcgcgccgccaccccgctcactactcgctcttcccgccgccgccgcctcctccgccgcgcagtcgccaaccgccgtcgccggtcgccgtcgccaaattccccactgccaccatggggcgtatgcacagccgcgggtatcctttcctcttcttcctcatccccctttactatagtattcttggtctggtgaaatctctgttctaatggcggctactcgacggtgtgtgggcgcaggaagggcatctcgtcgtcggcgattccgtacaagaggactcccccaagctgggtcaagaccgccgccgccgatgtgagggcctcctcatctcctggattctttgattcgatttggtttttttccattcccttttcacggtgattttgatacggtttgtgcgcgtcggttcttggtaggtggaggagatgatcatgaaggccgcgaagaagggccagatgccgtcgcagatcggcgtggtgctccgtgaccagcacggaatccccctcgtcaagagcgtcaccggcagcaagatcctccgcatcctcaaggcccatggtgagaatgagatttacccccaattctcacactcaattaccatcgctcgacgccttgtgtgtgttaatgtggagatatgtctgtgtgtgatggtgtgtaggtcttgcgccggagatcccggaggacctgtacttcctgatcaagaaggctgttgctattaggaagcatttggagaggaacaggaaggacaaggactccaagtttaggctcatccttgttgagagcaggatccaccgcctcgctcgctactacaagcgcaccaagaagctcccgcccacctggaagtagtaagttacacctcgcccacttgtttgtattgtttgttagttgtttaattgttagtcacatataactttactagtgtgctgttcttagttaggttcagcttgtagcagttctgtgcattcagcgatttatcatatttatttcaactgctaataagaacccaacaattgtgaattgtgattttttgtttagtagaactacataccagctcagtgctgtatgtttgaactactttcaagctccttaaggaattgtattgtagacgatgttctgctgcaggcttgtttgtacatgtttagcccatttggagcctgtttgagaattttgatcatgtttttctacagaaaatattatgaacactgcgtattgtttgatacataagaattttactggaagatattggtttgtacataatactgttgtttgacatgttttggaggaagaggaacatattgatatgtacagaaaatgatgtgattttactgctactcgttctgaactcctactactgggttaggtctttaagctagctaagcgatctgattctatcagttagttatattttactgataattagattttgactttggcattcatacattaatatgtcatgaaaaggctagcatccattatgcctgtcaaatacgcagatattttatgaaaaaactgtcttctgaaatttgatgttccttattgtttcaaatttgttaggacggtatgactcctatcaagaatgatatttcttatgtgctaggagataacagtaatcaagaacactaattctatagttgcaaaaggctgagattgtgttgcttttatttttgggtactctaaacaatattacaaaattcaatgaagatgagaatatgcttaattaaaagtgctttgtagctgcacttgtgttggtggtattgtcatagtatgctttgttttcttaagctcaacattttctttgtagttatgtttctttgcttatgggtgagtatgctgatgctcgcagtctaatgacttgttcaacttacatatagatatacatgcattctactcttgctgatttagtagtttttttttccgtatatacacgctggtaggtgttaatgccgaatgcctgaatgattgtgtttgttttgttatattaacaattttgattcagtcatagtgtaatatttatatgtggctgacaaattccttgttttctgcagtgagtcgaccacagccagcactctggtggcctagagagagagctctgcttctgctgtgctccttgctgcttcaagcttagcttgttctaggaatggattttatttatgtagcgcattatgagtcttgagacaagcaggagctgctaattttcctttgtctggagaatgccataaaacccttatgcattcaatattctgaacgttaaacttctagtaatgtgcatcgagattttgtttattataatcattctgtactctaaattgtttgctgtggtctgtcctgtgtgatttgcgttgattttaaggagagtgatactattttca</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0117200, RefSeq:Os08g0117200