Os08g0117700

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0117700| Description = Protein kinase-like domain containing protein| Version = NM_001067398.1 GI:115474532 GeneID:4344526| Length = 4622 b...")
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Gene Name

Os08g0117700

Description

Protein kinase-like domain containing protein

Version

NM_001067398.1 GI:115474532 GeneID:4344526

Length

4622 bp

Definition

Oryza sativa Japonica Group Os08g0117700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:973291..977912

Sequence Coding Region

973330..973810,975429..975689,975818..976693,977184..977674

Expression

GEO Profiles:Os08g0117700

Genome Context

<gbrowseImage1> name=NC_008401:973291..977912 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:973291..977912 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaccaccaccaagaacgccctgctcctcctcctcctcctcctcctcctctttcctctcctccactcctccctcgcggacgtcgccgccgccgcgccgtcctccgcgtcggcggcggaggtggacgcgctgatggagctgaaggcggcgctggacccgtcgggccgcctgctgccgtcgtgggcgcgcggcggcgacccgtgcggccgcggcgactacttcgagggcgtctcctgcgacgcgcgcggcagggtggcggcggtgtcgctgcaggggaagggactcgccggcgccatctcgccggcggtggccatgctgccggggctcaccgggctgtacctgcactacaacgagctcgccggggccatccctcgccagctcggcgacctccccatgctcgccgagctctacctcggcgtcaacaacctctccggcaccattcccgtcgagctcggccgcctccctgctctccaagtactgcagctcgggtacaaccagctctcagggagcatccctactcagctgggccagctcaagaagctcactgtgcttgccctccagtccaaccagctcaccggcgcgatcccggcatctctcggggacttgccggagctcgcacggctggatttgagctcaaatcgcctcttcggatcgatcccttccaagctcgccgcaatccccaagcttgccacattggacctcaggaataacaccctttcaggaagtgttccttctggcctgaagaaactgaacgaggggtttcacttcgataacaattcagagctctgtggagctcactttgattctctgaaaccatgcgcaaacggcgatgaagacgataatgaagaaggcagtaaaatggctcgtaaacctgaatcaaccaatgtcaagccactgcaagctccacagactatgaatgtgaacagagactgcgacaatggcggctgctcaaggtcatcgtcgtcgtcgacgacgctctcttcaggggctattcttgctggaacaatcatcatcatcggcggagcggcggcgtgcgggatatcggtgatctcgtggcggcgccggcagaagcagaaggtcggcggcggcggcacggtggagagcttggaaggacgagctagtagtagcaatgcgtcgtcgtcgttgatcaacgtggagtactcgagcggctgggacacctcgtcggaggggtcgcagcaggggctccggctatcgccggagtggtcgccgagcgtgaggtacaacatggaggaggtggagtgcgcgacgcagtacttcgccggcgcgaacctgctcgggaggagcggcttcgcggcgacgtacaggggggccatgcgcgacggcgcggcggtcgccgtgaagagcatcggcaagagcagctgcaaggcggaggaggccgacttcctccgggggctccgggcgatcacgtcgctccgccatgacaacctcgtcgcgctccgcgggttctgccgctcccgcgcccgaggcgagtgcttcctcgtctacgagttcatggccaatggctccctctcccgctacctcgacgtcaaggacggcgacgtcgtgctcgactgggccacgcgtgtctccatcatcaaaggcatcgccaaaggaatcgagtatctgcacagcagcaaggcgaacaaggcggcgctggtgcaccagaacatctgcgcggacaagatcctgatggaccacctcttcgtcccccacctctccggcgccggcgagcacaagctgctcgccgacgacgtggtgttctcgacgctcaaggacagcgccgccatgggctacctggcgccggagtacacgacgacggggcggttcaccgaccggagcgacgtctacgccttcggggtggtggtgttccaggtgctgacggggaggaaggcggtgtcgtcggagctccgcctcctcggcggcggtggcggcgcggagtactccggcaagctggacgacctcgtcgacccgcgcctcggcggccggttctccaggcccgaggccgccaagctcgccggcatcgcgctgctctgcaccagcgagtcgccggcgcagcgccccgccatggccgccgttctgcagcagcttggcgccacccagtag</cdnaseq>

Protein Sequence

<aaseq>MASTTTKNALLLLLLLLLLFPLLHSSLADVAAAAPSSASAAEVD ALMELKAALDPSGRLLPSWARGGDPCGRGDYFEGVSCDARGRVAAVSLQGKGLAGAIS PAVAMLPGLTGLYLHYNELAGAIPRQLGDLPMLAELYLGVNNLSGTIPVELGRLPALQ VLQLGYNQLSGSIPTQLGQLKKLTVLALQSNQLTGAIPASLGDLPELARLDLSSNRLF GSIPSKLAAIPKLATLDLRNNTLSGSVPSGLKKLNEGFHFDNNSELCGAHFDSLKPCA NGDEDDNEEGSKMARKPESTNVKPLQAPQTMNVNRDCDNGGCSRSSSSSTTLSSGAIL AGTIIIIGGAAACGISVISWRRRQKQKVGGGGTVESLEGRASSSNASSSLINVEYSSG WDTSSEGSQQGLRLSPEWSPSVRYNMEEVECATQYFAGANLLGRSGFAATYRGAMRDG AAVAVKSIGKSSCKAEEADFLRGLRAITSLRHDNLVALRGFCRSRARGECFLVYEFMA NGSLSRYLDVKDGDVVLDWATRVSIIKGIAKGIEYLHSSKANKAALVHQNICADKILM DHLFVPHLSGAGEHKLLADDVVFSTLKDSAAMGYLAPEYTTTGRFTDRSDVYAFGVVV FQVLTGRKAVSSELRLLGGGGGAEYSGKLDDLVDPRLGGRFSRPEAAKLAGIALLCTS ESPAQRPAMAAVLQQLGATQ</aaseq>

Gene Sequence

<dnaseqindica>40..520#2139..2399#2528..3403#3894..4384#acacgcctccagcctccgagcttgtcgcttccacctcccatggcgtccaccaccaccaagaacgccctgctcctcctcctcctcctcctcctcctctttcctctcctccactcctccctcgcggacgtcgccgccgccgcgccgtcctccgcgtcggcggcggaggtggacgcgctgatggagctgaaggcggcgctggacccgtcgggccgcctgctgccgtcgtgggcgcgcggcggcgacccgtgcggccgcggcgactacttcgagggcgtctcctgcgacgcgcgcggcagggtggcggcggtgtcgctgcaggggaagggactcgccggcgccatctcgccggcggtggccatgctgccggggctcaccgggctgtacctgcactacaacgagctcgccggggccatccctcgccagctcggcgacctccccatgctcgccgagctctacctcggcgtcaacaacctctccggcaccattcccgtcgagctcggccgcctccctgctctccaaggtgactcactgactgatcagttattggattgcattccagctgcgatttgggcagaaattagtactactggtagtttttattttgttgtttcttctctgcaggattagttcgagttctctagtgtttgtagtttgggaattttgaaaatgtttagagtttaatgatttgtgtatatgcaactctgttcctgaatttgatggaatttggagtacattgcgttgtttgtgctctgcataattagttctagttatttggtgtttcattaaatttaacattaaatatatttttataatatgtatcttttgtgttgaaaatactaccatgtttatgtttttctgtaaatgtggttaaactataataagaaatttaactaggaacaaaattcaaagcgatttataatatgaaacggtgtgaatagtttgtaaaaaatctgaaactgctaggagtttaatgtattgtgtacagtatatgcaattctgttcctgaatttgatggaatttttcgtacattttggtacctactagtagtagatagtactactagtgcactacgcaaaatttagggggtgtttgggcccctctctcataagttacttatgtttttatgtttttaagtgaggggctaaagtcccaaacatccttagacttgacaagtttctgttctttgtttggctcggagctttgagttgacatagataaaacatactactattatcggggtacattattgtgttccccaaatgctagtaccaaatcatatgctcttcttttgtctgagtgccgatgattaccttccccgctgcccatacaatcataactactccatccaaaaaaaaagaatccagaggcttgttcactttgctatcatttttaaccttatcaagttttgattttggtaagattgccaaaatatcttaccaaaattttagcaaggttgttaaattttggcaagatttcatatgtacttactaaaatttgccaacaaattaaatgtaaccacttttttagtaactttgctaaaaaaggtaaggttgaaaatggtattaaagtgaacaagccctaggactggaggtgacatattcttgtacgatgaatctggacagatgtatgtctaaattcgttgtattagaatatatcacattcagtattaggttggttttttataggacgaatggagtacaacccaagacatgtgaaatgacaaaaagtttgagctttgctcagtacaaattggcgtatttgcattccttcgtagtacggctacttgatgtgtgtatcacgaaatccgatctttattctctgccttttggcagttttcatcttccgtttcactctctacactgacacaaaaacaagtccagattctgctcaagaaattttatcagtgttctgaactttgaactgttgcaacagctatccacctgctccagtgctcatgatgccagtactactactctgtctgttcaattaatccaggattaattagcctgctaatagcttgattgccaatcagagatactagtatgacacatttggcacatgacacacctaccaagagttaattatcatcattaactgttcggcaaatgactgaagagtttttgtgtttcactgtgcagtactgcagctcgggtacaaccagctctcagggagcatccctactcagctgggccagctcaagaagctcactgtgcttgccctccagtccaaccagctcaccggcgcgatcccggcatctctcggggacttgccggagctcgcacggctggatttgagctcaaatcgcctcttcggatcgatcccttccaagctcgccgcaatccccaagcttgccacattggacctcaggaataacaccctttcaggaagtgttccttctggtaattatcattaatcattaaacaaaaacagttttaatagaaaatgaagagtttaaccatggtgtcatcagtaattgtaattagttagttttgtgtttcatctgagtagaatccattgattattgtaggcctgaagaaactgaacgaggggtttcacttcgataacaattcagagctctgtggagctcactttgattctctgaaaccatgcgcaaacggcgatgaagacgataatgaagaaggcagtaaaatggctcgtaaacctgaatcaaccaatgtcaagccactgcaagctccacagactatgaatgtgaacagagactgcgacaatggcggctgctcaaggtcatcgtcgtcgtcgacgacgctctcttcaggggctattcttgctggaacaatcatcatcatcggcggagcggcggcgtgcgggatatcggtgatctcgtggcggcgccggcagaagcagaaggtcggcggcggcggcacggtggagagcttggaaggacgagctagtagtagcaatgcgtcgtcgtcgttgatcaacgtggagtactcgagcggctgggacacctcgtcggaggggtcgcagcaggggctccggctatcgccggagtggtcgccgagcgtgaggtacaacatggaggaggtggagtgcgcgacgcagtacttcgccggcgcgaacctgctcgggaggagcggcttcgcggcgacgtacaggggggccatgcgcgacggcgcggcggtcgccgtgaagagcatcggcaagagcagctgcaaggcggaggaggccgacttcctccgggggctccgggcgatcacgtcgctccgccatgacaacctcgtcgcgctccgcgggttctgccgctcccgcgcccgaggcgagtgcttcctcgtctacgagttcatggccaatggctccctctcccgctacctcgacgtcaaggacggcgacgtcgtgctcgactgggccacgcgtgtctccatcatcaaaggcatcgccaaaggtacactgtacttcaccgtgctccgtttggtctgaaatatttaacgtttaggaaaaaatttggttaaattgttgagatttaatcatgaattttatatttttagaatttgtagacaagattcgattgaaatgttaaaatttggtcatcattctcatattaaaaaaattataactaagatccggttaaaccgttaaaatttggtatgaatttattttaatatgaaattgatgaccaaattttaacggtttaacggatcttatttatattttttgcttttgaactaagaaaataagatgttatttttgtttttaatctaagcaattgagaatttagttatagtcagaattttaaatgtttgacggaatgtacattgttctgaacgctagtaagagtttctcttttctgtttgaactacaaatttgaagtttttgtttcgtttgttcggcgttgagattgactgatttaaatttgaaatggcgaatttgttcaggaatcgagtatctgcacagcagcaaggcgaacaaggcggcgctggtgcaccagaacatctgcgcggacaagatcctgatggaccacctcttcgtcccccacctctccggcgccggcgagcacaagctgctcgccgacgacgtggtgttctcgacgctcaaggacagcgccgccatgggctacctggcgccggagtacacgacgacggggcggttcaccgaccggagcgacgtctacgccttcggggtggtggtgttccaggtgctgacggggaggaaggcggtgtcgtcggagctccgcctcctcggcggcggtggcggcgcggagtactccggcaagctggacgacctcgtcgacccgcgcctcggcggccggttctccaggcccgaggccgccaagctcgccggcatcgcgctgctctgcaccagcgagtcgccggcgcagcgccccgccatggccgccgttctgcagcagcttggcgccacccagtagtgacagcgtcaagctgccattgtcactgtaggttcaccttgtattattagctaggtgcctaggtgttgtaggagctagctagctgccattgtcgttcttccaagctccaccttcggttcctttctcaggaactcgatcgtttgcaagttagccattgttacatttgccagaattgaagaggttactgcatgattaacactacaataaaattttccatatatgttttctttttccaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0117700, RefSeq:Os08g0117700