Os08g0129500

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0129500| Description = Conserved hypothetical protein| Version = NM_001067450.1 GI:115474636 GeneID:4344582| Length = 3568 bp| Definition ...")
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Gene Name

Os08g0129500

Description

Conserved hypothetical protein

Version

NM_001067450.1 GI:115474636 GeneID:4344582

Length

3568 bp

Definition

Oryza sativa Japonica Group Os08g0129500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1648044..1651611

Sequence Coding Region

1648255..1648902,1649003..1649084,1649166..1649256,1651086..1651147,1651282..1651475

Expression

GEO Profiles:Os08g0129500

Genome Context

<gbrowseImage1> name=NC_008401:1648044..1651611 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1648044..1651611 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgtcgtcgccggcatccagcgggaaggcggccagcgactcgtcggcacccgcggtcgcggtcgccaacggcaatgggacgacgccgcagaagctgcccccggcgtccgccttcgacatgcccaagcccaacctgcgcggcctcaacaagcccaagtgcatccagtgcggcaacgttgcgcgctcgcggtgcccgttccagtgttgtaagagctgctgctacaaggctcagaatccttgccacattcatgttctgaaacagaacaacacattgccagataagccacctctgtcaacagctcctctgtcagagcaaccatcagctaatataccttcaaccggttcatcaaggttggcttctctgcaaaggcttccccatcatttcctgaattccctccgaacaaagaagtcccttgccaaaaaggatgttatgggcataaacaagtggaggtttgagaagctaaaagaacatatccaaggagacatcgatgctgaaaatgaagcgtatgaaaggtatacacagaatgttgggttactggaggaaacgttcggtcttacagaagatgctgctgatgaacctgaacctgaagcaacttcttcagaagagaggatggaaacattggtttccgaggcaaaggtgaggctgaaatcggactctgcaaatgcagatggcttccgggacaggattgctactattttggaccagaagataaaggaattgctagaaagcaaaagcacctacgaggatgacaaccctcctgaccaaaatccagatgaccatccaaagcctgtcaagttatccatcaagcagcaaatggagagaggtgcaaagatgactgagctccttgctaagatgataagagcacagagtgaggttgatctgaagatctgctctggtattgcggcgcagctgtttggaaagaagaatgaattgagcaaccaagaatctgttgcatctgttacgattccttattcttttccaaagctctggactagggtggagattgatgatgccatgatgtgtaagatcaacggcgaattttcgtcttcgacagaggtaatgcagctataa</cdnaseq>

Protein Sequence

<aaseq>MAASSPASSGKAASDSSAPAVAVANGNGTTPQKLPPASAFDMPK PNLRGLNKPKCIQCGNVARSRCPFQCCKSCCYKAQNPCHIHVLKQNNTLPDKPPLSTA PLSEQPSANIPSTGSSRLASLQRLPHHFLNSLRTKKSLAKKDVMGINKWRFEKLKEHI QGDIDAENEAYERYTQNVGLLEETFGLTEDAADEPEPEATSSEERMETLVSEAKVRLK SDSANADGFRDRIATILDQKIKELLESKSTYEDDNPPDQNPDDHPKPVKLSIKQQMER GAKMTELLAKMIRAQSEVDLKICSGIAAQLFGKKNELSNQESVASVTIPYSFPKLWTR VEIDDAMMCKINGEFSSSTEVMQL</aaseq>

Gene Sequence

<dnaseqindica>2710..3357#2528..2609#2356..2446#465..526#137..330#aggagagacacaaaagaaaaaaaaaagaagaaaccctagctcgccggagcaccgccgccgtcgaggcctccggttccccggaatcccaaccgctggtcctgtgcggagttgcggggtggttcacggcgggttcgctatggccgcgtcgtcgccggcatccagcgggaaggcggccagcgactcgtcggcacccgcggtcgcggtcgccaacggcaatgggacgacgccgcagaagctgcccccggcgtccgccttcgacatgcccaagcccaacctgcgcggcctcaacaagcccaagtgcatccagtgcggcaacgttgcgcgctcgcggtaagatttttttttttttgttttggggatttgtagtgatggttttctaagagaaatcgatgcgctgtatcggcatgtcgctcctggatattttttttaattcattctgtgtaatgtaatgcttggcctttcaggtgcccgttccagtgttgtaagagctgctgctacaaggctcagaatccttgccacattcatggtatgtatgtgtaatgctagtaccatttgagtatatatctgctcctgtgcaacgaattgtgcttgtaattagttgtattaagccgctgactgaatacctgtacatccacttattcgatcatttgatccaaccaatttttttgacaggcgtgatttggtcttgcagttttacctttctgtggactattactcattgtttggcagttggagatttacctgttttattgtttacaatttattctgggaatgcttatcacgtttagctacttagcatcaaagctaggacaattgcttgtaagtggggtagtgggatacttcaattatggaggaattttaaggtacggtcactttcttatggaccgttgatcaaacttataatgataagatttgaacatgctcatttcaacatctaaaagggaaactacaggtatagaaatgcattattataacgttttgttccattttggatttttatttttctcagtactgacaatgttgtcgcgtgcaattgaacaacattaacaaccaattaatgcttctccatcaggctgctcaaatagtgggatgatgttggtcaacagaatgtttgatcttcatattttgtagggtttagggaaggaaatgagggaaagggtgtagagaagaatttcagtatgtttgtcaggttggatcaaacagcggcagttttcttcaggactgtagtttaggatgtgggatgtgaccctgaacctgaaccaatgaatctaggtcgatgaacaagctacttggtctgtcaaaataaattatatggtataaaataaattactactactttatggtatgtcatacacaaacacccaaggaagataatcagttttacactacaaggaagggaacacgaaatgagacaaataaatatttgggttgtagagacatcagacatgtgacccatccagccacacaattctgttgctctatctcctcagttctaacataatctcatatcctcgccatcgatgcagtttcaggctttcagcagacacccttgccaccatcttttataagcaaatgccctagtcttctccaaacctcctcccctcttctgctgacttgtcttgcatcggcgacagagaaccttgagggccacgagatcacagggtgtagcaacttggtccccatcttctactgctggattatcccctgcagtgtgccaccacacaccttcacacatgccagcaccacctgaatggcgaggaacctggccactgttgccccaatcaaaatcaggtaggtttctgtacctgatttggatgcctctaataaccaaacacggcctggaggtgacctgcatcaactgtgaccagcaaactgggacaggttcaggaacgacagtattgtatcatgatctagtgactgtggtaatgactcacttgagtgccatgagcccatgacaaccttggtttctaaaattaaattgacccttgccatagcattattattgccttggtctctaaaatcaaatggaccttcagaaatgtgttttggagggataatggcctcatgggtgtaccttgaagggctcttatttgttgtattgtacctcttaaatctgctttcgaattatattcatctctctctatactcttcattatatggcactgaatgttgctgtcaaaatttattctctctggtgtataagggattagcaacatttggttacatacaagaaattttgatttatggctatgatgttatgcctgtctacatattttctgtgatttgtctggactctgtatttttctaatatttttgaaaaagccactaaccacctcttatcaccaatcatgacagttctgaaacagaacaacacattgccagataagccacctctgtcaacagctcctctgtcagagcaaccatcagctaatataccttcaaccgggtaaccttctgaaccaggagttttatcttatggtaaaatctgtcattatttctgatgcttgcttgaaatttgctgctgcagttcatcaaggttggcttctctgcaaaggcttccccatcatttcctgaattccctccgaacaaagaagtcccttgccaaaaaggttctagctgttccattgtttgcgattgttcattgtttagtttcgtttcttttcttccatgatgagaccatgattaaggagttaagcatttatattacaggatgttatgggcataaacaagtggaggtttgagaagctaaaagaacatatccaaggagacatcgatgctgaaaatgaagcgtatgaaaggtatacacagaatgttgggttactggaggaaacgttcggtcttacagaagatgctgctgatgaacctgaacctgaagcaacttcttcagaagagaggatggaaacattggtttccgaggcaaaggtgaggctgaaatcggactctgcaaatgcagatggcttccgggacaggattgctactattttggaccagaagataaaggaattgctagaaagcaaaagcacctacgaggatgacaaccctcctgaccaaaatccagatgaccatccaaagcctgtcaagttatccatcaagcagcaaatggagagaggtgcaaagatgactgagctccttgctaagatgataagagcacagagtgaggttgatctgaagatctgctctggtattgcggcgcagctgtttggaaagaagaatgaattgagcaaccaagaatctgttgcatctgttacgattccttattcttttccaaagctctggactagggtggagattgatgatgccatgatgtgtaagatcaacggcgaattttcgtcttcgacagaggtaatgcagctataaacctggaattaatctgttcagacccaatgcttgtctacactagaagaacatggttgaaccacagcttcttttctgcttaacctactgttcgtttaatgtaagcaattgtaattgttttcatcagagacaaaaaccatgagagcaacacagtagtttgaccagtttgtattaaaccatgacatgagagcaatacagtagtatagttgttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0129500, RefSeq:Os08g0129500