Os08g0137300

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0137300| Description = Protein of unknown function DUF604 family protein| Version = NM_001067490.1 GI:115474716 GeneID:4344622| Length = 37...")
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Gene Name

Os08g0137300

Description

Protein of unknown function DUF604 family protein

Version

NM_001067490.1 GI:115474716 GeneID:4344622

Length

3710 bp

Definition

Oryza sativa Japonica Group Os08g0137300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2107321..2111030

Sequence Coding Region

2107391..2108230,2109555..2110088,2110185..2110292

Expression

GEO Profiles:Os08g0137300

Genome Context

<gbrowseImage1> name=NC_008401:2107321..2111030 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2107321..2111030 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgacgccgccgtctcgcccgcgcctccctctccgcccactcctcctctccctccctctcctctcgctcctcctcctcctcctcatccaccgtccccacccctccccgccgcctcccctcctcgccaccgccaccgccacgcggcgcgacgacgagccggcgccgcggcgagcggcgtcgtctttggcgcccaaggcgacgacgacgacgacgctggcgcacgtggtgttcggcatcgcctcctcccgccgcacgctgccgctccgcctcccgctgctccgcctctggctccgcccgcccgcgcgcgcgttcctcttcctcgacggcccggcgccggccgccgccgccgcgtccgagccattgccgcccaacctccgcttctgcgtctcctccaccgacgcctcccgcttcccgtacacgcacccgcgcgggctcccctccgccgtccgcgtcgcgcgcatcgccaaggagctcctgcagctcgacgaccaccaccacgcgacgccgcccccgccgcggtggctcgtgctcgccgacgacgacaccgcgttcgtcctcccgaacctcctgcacacgctctccaggtacgactggcgcgagccgtggtacctcggcgcgcgctccgagtccgcggcgcagaacgcctggcacggcttcgccatggcctacggcggcggcggcatcgccgtgagctggccgctcgccgcgcgcctcgcccgcgtcctcgactcctgcctcctcaggtacccgcatctctacggcagcgacgccaggatccacgcctgcctcgccgagctcggcgtcgagctcacccacgagccaggattccaccagatcgaccttcatggggacatatctggactcctaagagcgcatccgcttactcctttagtttcactgcaccaccttgatcatgtatatcctctttacccgggtatggaccgtgcaacagcggtgaagcatttcttcagagctgccaatgctgatccagcaaggatccttcagcagacagtgtgctatgaccattcgaaagcaattacagtgtcaatagcttgggggtattcagttcaggtgtacaaaggcaatgtgctgcttcctgacctccttgctgtgcagaaaacgtttgtgccgtggaaaaggggtcgcaatgctactgatgtttttatgtttgataccaagcattacccgagggatgagtgcaaaagagctgctcttttcttcctcaaaagtatttcttcaggtgaaggcaagatcaaaagcgattacactaggcagctgcctagaaaatgctcacctaacttgattccattgaggaatcttcaccaaataaaagtggcatctgagccattacatctggttcctgggaaggctttaagacggcattgctgtgatgttgtgtcttcctcatctgaaaccaacatggatgttaacatcaggaaatgcaaagaagacgaactgattgcgatgcattcttag</cdnaseq>

Protein Sequence

<aaseq>MAPTPPSRPRLPLRPLLLSLPLLSLLLLLLIHRPHPSPPPPLLA TATATRRDDEPAPRRAASSLAPKATTTTTLAHVVFGIASSRRTLPLRLPLLRLWLRPP ARAFLFLDGPAPAAAAASEPLPPNLRFCVSSTDASRFPYTHPRGLPSAVRVARIAKEL LQLDDHHHATPPPPRWLVLADDDTAFVLPNLLHTLSRYDWREPWYLGARSESAAQNAW HGFAMAYGGGGIAVSWPLAARLARVLDSCLLRYPHLYGSDARIHACLAELGVELTHEP GFHQIDLHGDISGLLRAHPLTPLVSLHHLDHVYPLYPGMDRATAVKHFFRAANADPAR ILQQTVCYDHSKAITVSIAWGYSVQVYKGNVLLPDLLAVQKTFVPWKRGRNATDVFMF DTKHYPRDECKRAALFFLKSISSGEGKIKSDYTRQLPRKCSPNLIPLRNLHQIKVASE PLHLVPGKALRRHCCDVVSSSSETNMDVNIRKCKEDELIAMHS</aaseq>

Gene Sequence

<dnaseqindica>71..910#2235..2768#2865..2972#actccaaaaagtccaaatacacattcccacgctcaacctcaacccccgcctccgctcgccgcggcgcgccatggcgccgacgccgccgtctcgcccgcgcctccctctccgcccactcctcctctccctccctctcctctcgctcctcctcctcctcctcatccaccgtccccacccctccccgccgcctcccctcctcgccaccgccaccgccacgcggcgcgacgacgagccggcgccgcggcgagcggcgtcgtctttggcgcccaaggcgacgacgacgacgacgctggcgcacgtggtgttcggcatcgcctcctcccgccgcacgctgccgctccgcctcccgctgctccgcctctggctccgcccgcccgcgcgcgcgttcctcttcctcgacggcccggcgccggccgccgccgccgcgtccgagccattgccgcccaacctccgcttctgcgtctcctccaccgacgcctcccgcttcccgtacacgcacccgcgcgggctcccctccgccgtccgcgtcgcgcgcatcgccaaggagctcctgcagctcgacgaccaccaccacgcgacgccgcccccgccgcggtggctcgtgctcgccgacgacgacaccgcgttcgtcctcccgaacctcctgcacacgctctccaggtacgactggcgcgagccgtggtacctcggcgcgcgctccgagtccgcggcgcagaacgcctggcacggcttcgccatggcctacggcggcggcggcatcgccgtgagctggccgctcgccgcgcgcctcgcccgcgtcctcgactcctgcctcctcaggtacccgcatctctacggcagcgacgccaggatccacgcctgcctcgccgagctcggcgtcgagctcacccacgagccaggattccaccaggtaacctttgcttcttattgtttacattttctcatcaacatgctactgccctaatggaatgttaggttagattgctgattgctcattaattcaattgtgttgatagatagaatgatagatagatagatactggtggattgataaagaatgaactttttaaaatcaaaatttggtactcttgacacctgactggtgagtagagcaggaattgtctcaggatatatctgaccatatttgataattgtattttgtgccgcgtaaccaccatcacgggcggtttgtataacaatgattgtattactgtaataattaaatcattatgtagtacaaccatgttgttcctcacaaaaaaaaaattgttgtaatctattcagccttgcttagtcacaccgtagttcagaggcatagctagtctttgatattaagttatcagttatggaagagaatcgttgggtgaaattttggattgtatcaggtcaaaagaaaaaaaaatagtattgagcttgcaaaatcattgcctagtatgaagggattatgttgttaatggtagaaaatcttaagctgtcagcactctaaactttttttttttttgcttccactataaatttttagtgtacattgttgtctgcaattctgcatacatttgtgccgtacattagacttttcaagaaaaagcttatcctttagaatgctctcaaggaatgcagaaccacaccacaccaatcctgtagaatgttgctaagttgtgtacacatggaaccatactgattacagaacataagcgatgggtactggctaacaactacaactacgaattgcggaaccaatacgaaatctttgctactgcccactggatttagtgatccatgcttgtgcatcgactgattttgatgtgagggcacttgaaagtgggtgctttggtccgcatgccacacatccctttcagattatcttaagcttcgccatcactatcttaatgctgtcaaaatgggcatcttccaagataatgatgttgtcaactagaactgttggctgttgctgaaataagtagtgcagtgggtcgctgtctgacagttaaatatggcagcagaaaatatttccttttgctccacctatgtgtttcacttactgaattgtatgacttacactatataaactgcaaggtattgctttcttcctcattttcagccactgaaaactatgagatgtcttcttcttgacgactctttagacgcgaaacattcccatggctttacttaatattatgcaacaaaaaaaatcttgattcttaacttgtgtgttgtgttgcatttgttatatccagatcgaccttcatggggacatatctggactcctaagagcgcatccgcttactcctttagtttcactgcaccaccttgatcatgtatatcctctttacccgggtatggaccgtgcaacagcggtgaagcatttcttcagagctgccaatgctgatccagcaaggatccttcagcagacagtgtgctatgaccattcgaaagcaattacagtgtcaatagcttgggggtattcagttcaggtgtacaaaggcaatgtgctgcttcctgacctccttgctgtgcagaaaacgtttgtgccgtggaaaaggggtcgcaatgctactgatgtttttatgtttgataccaagcattacccgagggatgagtgcaaaagagctgctcttttcttcctcaaaagtatttcttcaggtgaaggcaagatcaaaagcgattacactaggcagctgcctagaaaatgctcacctaacttgattccattgaggaatcttcaccaaataaaagtggcatctgagccattacatctggttcctgggaaggtatggctatgatggttgccttcatcaattgtgacacaaatttcagtgctcgaattaagattttgtgattgttcttttactgttgtgtgtttttaggctttaagacggcattgctgtgatgttgtgtcttcctcatctgaaaccaacatggatgttaacatcaggaaatgcaaagaagacgaactgattgcgatgcattcttagtcacatcttcaatcgaactggatgcaatgctcttcctctgtagtaagttcctcctcacatccctttgtattttcacagaattttcctggacacacgcctcaatgttttatcacatgaaacatgcgtttccattttattttgggtcccaccaggtctgacataacttttctcgtagcaatttataattttcgtatgatctttgcagtaattccattgtactagcttcctagtacagaaagtgacaagacaagttaagcagactagcattgtaatagattctccatgaagtctcacattctgccgtttactttggtcaactggaatctcctttacaaaggagtggaggcaccataatctgtttgtgctatacaatgacctttttagcttgaagaaaaatgcatagtggacttgagtgcggccctccttttggtgatcaagacgacttctggtgacagtagtactactgaaactagaacagcatggatacatagatagatacttcctccgtttcacaatgtaagtcattctagcatttcccagatttatattgatgctaatgaatctagacatatatatttatctagattcattagcatcaatatgaatgtggaaaatgctaaaatgacttatattatgaaacggaggaagtagttgagatgttgaacaacacacttcattattattattttttaactttacctagcaaatgctcatatttatatatgatattttaccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0137300, RefSeq:Os08g0137300