Os08g0150800

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0150800| Description = Similar to Tyrosyl-tRNA synthetase (Tyrosyl-tRNA ligase| Version = NM_001067530.1 GI:115474796 GeneID:4344663| Lengt...")
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Gene Name

Os08g0150800

Description

Similar to Tyrosyl-tRNA synthetase (Tyrosyl-tRNA ligase

Version

NM_001067530.1 GI:115474796 GeneID:4344663

Length

4268 bp

Definition

Oryza sativa Japonica Group Os08g0150800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2923249..2927516

Sequence Coding Region

2923289..2923540,2924404..2924687,2924800..2924896,2925024..2925129,2925270..2925352
,2925917..2926062,2926229..2926334,2926507..2926566,2927195..2927245

Expression

GEO Profiles:Os08g0150800

Genome Context

<gbrowseImage1> name=NC_008401:2923249..2927516 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2923249..2927516 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacccctcgcagccgtccgggagctccgccgacgcctcggcgtcctcctcctcctcctcctcctcctccgccgtggagaatctcgccgcggggatggcggccatgagcctccaggatcggttcgagttgctgcgggggatcggcgaggagtgcatccaggaggacgagctcatgaacctgctgcagaagaagcccgtccccatctgctacgacggtttcgagccctccggccgcatgcacattgctcagggcattgtgaagacaatcaatgttaacaagatggtcagagctggatgcaaagtgaaaatttggatagcagactggtttgctcagctaaacaacaagatggggggtgatataaaaaaaatacagactgtgggacgctacatgattgagatttggagagcggctggtatgaatcttgatggtgtggaattcttgtggtcctcagaggaaatcaataagcgtgcaaatgaatattggccacttgtaatggacattgctcgtaaaaataatgtcaaaagaataatgagatgttgtcagattatgggtcggaatgattcggatgagttgactgctgcccagatcttctatccttgcatgcagtgtgctgatatatttttcttaaaggcagacatttgccagttgggcatggaccaaaggaaggtcaatatgctagccagggagtactgtgatgacatcaaaaggagaaacaaaccaattattctgtcacatcatatgctccctggttttaaggagggccaagaaaagatgtcaaagagtgatccatcctcagccatttttatggaagatgacgaggctcaggtaaatttgaagataaaacaagcattttgccctcccaacattgttgatggcaatccatgcttggagtacatcaagtacattgttttcccttggtttgaaacgtttgaggtggttcggaaggaagaaaatggcggtaacaagacatttgccaacatgaatgaactcatcgctgattatgagagtggtgctttgcatcctgctgatgttaaaccagctcttgcaaaagcgataaaccaaatattgcagcctatccgtgaccacttcaaaaacaacagtgaagcaaaagttctgctcaacactgttaagaattacaaagtaaaaacggaggatactagttcaagccctcaagcatcttaa</cdnaseq>

Protein Sequence

<aaseq>MDPSQPSGSSADASASSSSSSSSSAVENLAAGMAAMSLQDRFEL LRGIGEECIQEDELMNLLQKKPVPICYDGFEPSGRMHIAQGIVKTINVNKMVRAGCKV KIWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLDGVEFLWSSEEINKRANE YWPLVMDIARKNNVKRIMRCCQIMGRNDSDELTAAQIFYPCMQCADIFFLKADICQLG MDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSKSDPSSAIFMEDDEAQ VNLKIKQAFCPPNIVDGNPCLEYIKYIVFPWFETFEVVRKEENGGNKTFANMNELIAD YESGALHPADVKPALAKAINQILQPIRDHFKNNSEAKVLLNTVKNYKVKTEDTSSSPQ AS</aaseq>

Gene Sequence

<dnaseqindica>41..292#1156..1439#1552..1648#1776..1881#2022..2104#2669..2814#2981..3086#3259..3318#3947..3997#gccgcaaaacccttctcccgccgccgccatcgccgccgccatggacccctcgcagccgtccgggagctccgccgacgcctcggcgtcctcctcctcctcctcctcctcctccgccgtggagaatctcgccgcggggatggcggccatgagcctccaggatcggttcgagttgctgcgggggatcggcgaggagtgcatccaggaggacgagctcatgaacctgctgcagaagaagcccgtccccatctgctacgacggtttcgagccctccggccgcatgcacattgctcaggttcggcgaatccgccgcgtcctcctctcctgcctcttgaatcgatctactttccctaggtttcgagataactgaggtcgggttaagtagattgtacaaggacatagaatttccttgttggctagaactcgattaatcatggaggacattagaaacgtcacactactttttttttaattttttttgctcccaaagtttctgagtgcaatctcctgaaatttgaagggatgtgctcttttctacctggtagggtactagcattattagcaaatcatgctaatatgtgatttaagttatgtgttgcgtcgatgttaatttagtaatcgcatggacattcaagatggatcaccatgattttacctagcagggtagtggggattcgcactaatatgctcacttcactttaagctgtcgatgtaaataaatttgggttggatatagatataaggtttgttttatccattgacctttatgaaccacatgggtgaaatgaagtgtggtgtctatgttaatctggtatgtgttaaatggtggtgtgtgctggtttggatagtaaccagccatgatgatgatagttttctctagaactatgaaacatataatctagttcattattcctatgtttcgaggtttattcttgttctagaaaatgaaaacaaactagcataatcattcctttggtgttaccattacctgatctttggttacaatattcactagtatatctttttttattgtgtgcttcctcttctgtcatgactcgttgcgggcagtgacgcgtgaagtttacacgtgcaaaagttttggactgtaggatttgaacagatgaattggtcttgatcgatctttctgtctattgtcagggcattgtgaagacaatcaatgttaacaagatggtcagagctggatgcaaagtgaaaatttggatagcagactggtttgctcagctaaacaacaagatggggggtgatataaaaaaaatacagactgtgggacgctacatgattgagatttggagagcggctggtatgaatcttgatggtgtggaattcttgtggtcctcagaggaaatcaataagcgtgcaaatgaatattggccacttgtaatggacattgctcgtaaaaataatgtcaaaagaataatgaggtaaccatcttttgtttgcttatatacatctatggcttcttcgttcccaaagcttgaaagtgttattgccattcctaacatgcaagtgagtatatttttctttggtttgcagatgttgtcagattatgggtcggaatgattcggatgagttgactgctgcccagatcttctatccttgcatgcagtgtgctgatatatttttcttaaaggttagtacatttacactattgcacaagtgctttgtgaaaaggaagtatactgagttacaatgtaaagacagctgtgtgcatgaacctgtggcatgagtttgctctaattatccctttccctttgtaggcagacatttgccagttgggcatggaccaaaggaaggtcaatatgctagccagggagtactgtgatgacatcaaaaggagaaacaaaccaattattctgtcacatcgtatccttatctgcccttccaagttggttaaacctttatatgcagtaaataaacatgggacactgttcaagctgagtcataattgggggttcttaaccagtttttagaacactgtattacttccttaacctgaattacagatatgctccctggttttaaggagggccaagaaaagatgtcaaagagtgatccatcctcagccatttttatggaagatgacgaggttttccccattactaccagttatccatctttatatacttctgaacccaatattgcaatataaaataattgcttttgtcatgcactatgcctctcataactatgctcatgcaccaacagttattgaagagtggcatgaccttctagtttgcactggtgaatagagatagtggaatatgttttaaggatatttgcctaggatgtttaggatttggtcatcatctaccataaaagataaaggaatgtttaagcgctatactttcatgttttacttggcgattttaattttgttatagttcctagttttgagttgacagatatattattttgaatggctactgtgtagccttttatgctgatttgcagtttattcattttgcataatccagtggataaatggaatcatttatgtttgtaccatttgcttggagcattgtcttctatagtgacttctgctttgtccctattgtgcctggctacctattttctgttaagttggcttctcgcagctcatcattgctctacctgggtttctaagtttatttgcttcataacttcattgcaggctcaggtaaatttgaagataaaacaagcattttgccctcccaacattgttgatggcaatccatgcttggagtacatcaagtacattgttttcccttggtttgaaacgtttgaggtggttcggaaggaagaaaatggcggtaacaagtaatattttattctgagctaccaaactttgaattatcctatttactatcaatcatgttaaaggataatcatacgataataactgtaccaccagtttatctgcaaactgagcacaaccatttatgttttcagttgtaacaactgtttgccatttgctgttaaacaggacatttgccaacatgaatgaactcatcgctgattatgagagtggtgctttgcatcctgctgatgttaaaccagctcttgcaaaagcgataaaccaaatattgcaggtatgaatcctggcaaaacgaattgatggattcttttaattgttgcgggatcaatcttgcatcagtacatttttgtattgacctgttttttcattggatacgatgtagtatgatcaatagtccattgctcttagattatcgtcttaataatgttatcctttcccattttcagcctatccgtgaccacttcaaaaacaacagtgaagcaaaagttctgctcaacactgttaaggtatatttttttttgagcaatgctacacgtactaaatttttcttactaaacttttactaacaatcatctcaaccgtttgatttaagtagatgcaagttacaaaaattctaggtgcactcatagcatgacacatcagtgttagtaagaatttagtaagaaaaagttagtacgtatagccttttcctttttttttatccatctgttaactgtacggttacctttctatgttctttctacgttctatcttcgaactgtaactgcaactctgcaagatagtaaccactttgatgccttttaactgcacctgtgcactatctcagattgagttttgtagaagtgatttatgatccggttcattgtcaatagcttgaatcatgcctttttcttgatatatctgcttgattgggattttttgtcggtggcatttgagacctgactcagccggcataaccatgcaaaacctcatttaccaggaaataatggaaaaaaataattgtttactttaatttgcagttttattttagggctcttaataatctggctgaactttgagttactctattgacagcgattagtgccaatacgggtcaattactaggaagttaatttgaacttttctgatttgcagaattacaaagtaaaaacggaggatactagttcaagccctcaagcatcttaagagttcatgatggtctacatggatatcttttaactttgtttacattatgcagttgtgtgatacacattctcttttggttagtgttatgtactttaaatgttcatgatcaccttataccgttatagtatgagaaaaaaggcaaaagttttgagtgcagacagtggaaatgccttgttgataccaaacatttgttctgctctgcatctgcacaaccactaaggtcttacctttgtggaaagaaatattaactggtgaagccctgtttggaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0150800, RefSeq:Os08g0150800