Os08g0154300

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0154300| Description = Transaldolase family protein| Version = NM_001067549.1 GI:115474834 GeneID:4344683| Length = 3870 bp| Definition = ...")
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Gene Name

Os08g0154300

Description

Transaldolase family protein

Version

NM_001067549.1 GI:115474834 GeneID:4344683

Length

3870 bp

Definition

Oryza sativa Japonica Group Os08g0154300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3127373..3131242

Sequence Coding Region

3127721..3127867,3128259..3128394,3128471..3128568,3129071..3129148,3129223..3129292
,3129799..3129863,3129953..3130033,3130169..3130273,3130349..3130432
,3130522..3130597,3130705..3130783,3130873..3130993,3131115..3131174

Expression

GEO Profiles:Os08g0154300

Genome Context

<gbrowseImage1> name=NC_008401:3127373..3131242 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3127373..3131242 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctctccatctccacgccgccgacctcctcctccctcctgccggcctccctccaggtcggcaggtggagctcgtcggcggcgatgtcggccaggcctgtggcctttagcctccggaggccggttcttgcggcccgtgtagccgccggcggcaacgcaccgtcttcctccgtggacgaggtggtcactgagctcgatgccgtggccagcttcagcgagatcgtgccggataccgtcgtgttcgatgacttcgagaagtttgcgccgaccgccgccacggtgagctcgtcgctgctgctcggtatcgctggcctcccggatacaaagttcaagagtgctatagatacagcgttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttcctaaccaaggccctggcaaatgttggagctgaaatggctcatctagtccctggtcgggtgtcgactgaaatagatgctcggttggcttatgatacccaaggaattatccagagggtgcatgagcttttgaagctatacagtgatcatgatgtcttatctgaacgcctgctgttcaaaattccggctacatggcaaggtatagaggcctcgaggttgcttgaatctgaagggattcaaacacatttaacatttgtgtacagttttgcccaagcagcagctgcagcacaagccggtgcatctgttgtacagatctttgtgggacgtgttcgggattgggcaaggactcactctggcgacccagagattgatgaagctttgaagaaaggagaagatgctgggcttgctttggcgaagaaagtgtatgcctacattcacaaaaatgggtataaaacaaagttgatggctgctgccatacgcaacaagcaagatgtgtttagcctcctggggattgactacatcattgcacctctgaagatattgcagtctttggaagaatctgtcactgatactgacgtgaagtatggttatgtcccaaggctgactcctgctcttggcaaaacgtacaacttcactgaagaggagcttgtgaagtgggaccaattgagtctagcagctgcaatggggccagctgcggaagaactacttgcttctgggttggaaggatatgtgaaccaagcacgccgagtggaggaactcttcgggaagatctggcctcctccgaatgtttga</cdnaseq>

Protein Sequence

<aaseq>MALSISTPPTSSSLLPASLQVGRWSSSAAMSARPVAFSLRRPVL AARVAAGGNAPSSSVDEVVTELDAVASFSEIVPDTVVFDDFEKFAPTAATVSSSLLLG IAGLPDTKFKSAIDTALADGECNTMEKPEDRMSCFLTKALANVGAEMAHLVPGRVSTE IDARLAYDTQGIIQRVHELLKLYSDHDVLSERLLFKIPATWQGIEASRLLESEGIQTH LTFVYSFAQAAAAAQAGASVVQIFVGRVRDWARTHSGDPEIDEALKKGEDAGLALAKK VYAYIHKNGYKTKLMAAAIRNKQDVFSLLGIDYIIAPLKILQSLEESVTDTDVKYGYV PRLTPALGKTYNFTEEELVKWDQLSLAAAMGPAAEELLASGLEGYVNQARRVEELFGK IWPPPNV</aaseq>

Gene Sequence

<dnaseqindica>3376..3522#2849..2984#2675..2772#2095..2172#1951..2020#1380..1444#1210..1290#970..1074#811..894#646..721#460..538#250..370#69..128#gttccactcctccctcactctctcccacagttagcatctcgccattcctccgatccccacctccaccaatggcgctctccatctccacgccgccgacctcctcctccctcctgccggcctccctccaggtacgccctcccgctccgccgcctcctcctctctccgacgagctctcatttgcccggttcggccgctcctcgcgcccgtttcacccgttcttggtcaccgccgccgcttcttcctcttcaggtcggcaggtggagctcgtcggcggcgatgtcggccaggcctgtggcctttagcctccggaggccggttcttgcggcccgtgtagccgccggcggcaacgcaccgtcttcctccgtggacggtaaggatgctggccttgtgcttgtcagttgtctccttcatggcttcctgtgtgatttgagttactgattttggtcagcttggttgtagaggtggtcactgagctcgatgccgtggccagcttcagcgagatcgtgccggataccgtcgtgttcgatgacttcgagaagtaatactagtagttgcttctttgctgttatcccaccattgaatttagttggccgatccaacttaatggaatgatagttcataggctgctctgttgattgggttcaggtttgcgccgaccgccgccacggtgagctcgtcgctgctgctcggtatcgctggcctcccggatacaaagttcaaggtgaggtgctgttgaaatgtgaagccaatcaaagcactggaagtggaagagagacagttgactaattttcagacttttgtttcttatagagtgctatagatacagcgttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttcctaaccaaggtttgcatactgcatttcagtttcaatgtaagcagtctgtttgttggataagttgagcatggaggaatttggcaggccctggcaaatgttggagctgaaatggctcatctagtccctggtcgggtgtcgactgaaatagatgctcggttggcttatgatacccaaggaattatccagagggtatgagcttcttccttctgtttgttgtttcatgctgcttgcctgaaatatttatccttaggggaaaagaatcctccgtgaattgtgatctgcagttgcagtcccatgaaaataatttgatatgcgtatgttcaggtgcatgagcttttgaagctatacagtgatcatgatgtcttatctgaacgcctgctgttcaaaattccggctacatggcaagtaagtagaatgcaacacagtagttggcaagttgcctggttgtacctgctgccatttcccatctttgtaatcgatgtgttctccactagggtatagaggcctcgaggttgcttgaatctgaagggattcaaacacatttaacatttgtgtacaggtatgtacatatgctttgcctaatttgatcatggccctatttcttatagtgggcaatggtatagatgctgggtgtatggcaatacttatcttttttgtggggttagagaactgccttcaatttgtttagtcttaagatacttcagtaagtataagggaactaataaagattgtttcttattatcatgcatcacttattaatgatggctcaattgcattgtaagtatacattttgcttttatgtcagcagaagaagaggttttctattgaatttacctggtgaattgtaattactcaattaggcctgactagttactgttgataacaagcttatctataaaggacttgcactattgcaggtgcataaaagccataaacttactcttgcaatttacataagatggtattgttggagagagcagactgcaggatgtgtagctcacctagtagttagtaactgagaactcgtaatcatttttttttgtgtgcctgatcattcttcttcagttttgcccaagcagcagctgcagcacaagccggtgcatctgttgtacagatctttgtgggacgtgttcgggtaaattcatcagacccttaccttcatgggtttatgctaattcaaaaaaattatgctgaccacaaattatgcaggattgggcaaggactcactctggcgacccagagattgatgaagctttgaagaaaggagaagatgctgggcttgctttggttagcactaaattaccttttaatttatgattgttcctacagaattctatcaatatgaactaaagtagccacattttgataatcatgataactgactatttgagctcaactaaaatatatttagttgattagaggttgtgtacttaactatatcaggtaatatgaactatgcttgggttgattctaggacttggcatattttagactccatttggttctcatcatcaacaattttgagcaaaccatgtgttaatctggcatgttgcccatgttatagtgtaattgataaaactcatataactgaataatcagtgacaattatcaaggttttcattaataaagggactatgaatgaagaacattatacttatcaagcgttcacgtcttctcaattcgatactgaactaaatttccgtttactctctacatgttttacattccttactttttctgcagttgcataagtatttagttctccatataattctatattgtaatgcaggcgaagaaagtgtatgcctacattcacaaaaatgggtataaaacaaagttgatggctgctgccatacgcaacaagcaagatgtgtttagcctcctggggtatttttcttattacagatcaagattgatcgcaatggatgttagtttgtacagaactaatatttctgaaatgtaggattgactacatcattgcacctctgaagatattgcagtctttggaagaatctgtcactgatactgacgtgaagtatggttatgtcccaaggctgactcctgctcttggcaaaacgtacaacttcactgaagaggaggtttgctcacttatcctggattttgtgcagagtcttatatcatgcattctgtagctccaccaaactactcgctataagagactcctattaggggtgtgatgttttatctaaaatatataggatcttcacttgtcatgtgctttaacactactagagatgaaataaggaaggaaaataatatttggactgtttagatcacccttaaaaggtcatgtcaaagctcgtagtaggtgtaatcatgattcaccaaacagttactagaacaatacaaacaagtcattgacatcctataagaagaggaaaaataaaacaagagaagataagtgattatattttttatatggcaccttcatgctaactgttcatatttcaaatgataccacgaatgcagcttgtgaagtgggaccaattgagtctagcagctgcaatggggccagctgcggaagaactacttgcttctgggttggaaggatatgtgaaccaagcacgccgagtggaggaactcttcgggaagatctggcctcctccgaatgtttgaacacattctatgatgaggaccagaccatgccacagtcttctattccaaagaataataacaacagccacggacagtgctggccagcatttgctcgttcccttcaaagaatacttctcttagcctgtctgtgtttgtactttgtagttctctagctatctagcaaatctcacgatgacatgtcaagaacatctttgttttcttttcgcaaagattggatacggattttctcgagtatttcattagcccgtgagatgtgtaccatgaaatgtcacccaaatgctctgctggattgttctgaagtctgaactgaatcttcagagttgcagttacttatcactacgttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0154300, RefSeq:Os08g0154300