Os08g0162000

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0162000| Description = Nonaspanin (TM9SF) family protein| Version = NM_001188464.1 GI:297726058 GeneID:9272473| Length = 4562 bp| Definiti...")
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Gene Name

Os08g0162000

Description

Nonaspanin (TM9SF) family protein

Version

NM_001188464.1 GI:297726058 GeneID:9272473

Length

4562 bp

Definition

Oryza sativa Japonica Group Os08g0162000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3629961..3634522

Sequence Coding Region

3630418..3630575,3631212..3631260

Expression

GEO Profiles:Os08g0162000

Genome Context

<gbrowseImage1> name=NC_008401:3629961..3634522 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3629961..3634522 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagggtgaggatgggagcagcggttcttggggtggcagtggtggtgttggcgtgtgttttgggagcaagagcagatggctccgatcatagatacaaggatggagattatgtcccgctctacgccaacaaggtcggccctttccacaatccaagtgagacgtatcggtactatgacctacccttttgtgcaccaggtttgtaa</cdnaseq>

Protein Sequence

<aaseq>MVRVRMGAAVLGVAVVVLACVLGARADGSDHRYKDGDYVPLYAN KVGPFHNPSETYRYYDLPFCAPGL</aaseq>

Gene Sequence

<dnaseqindica>458..615#1252..1300#aactgcttgaccaccctgaccaaacattttcctccacaaagtctccacgaactcgccccaagatcaccgcccatttcccccaccctcgccgccggcgaagacgcgccgcagcagacgaggcggccgttttcatctcatcatctgttcggaaaatcttctcttctcgccattccggcgccgccaccgccagaaaagaaaggttgggtcttggtaaaaaaaaaaaaaaactcatccttgcgctcgcgctcgtcggcgatcgatccccactcacctgcgacggcgagcagcggcgcccgcgaggggagcagcccgtcgtcccgctgcttccgcctccggtgagcacacccacgacgcgcatccttatcttctcttctagatctggaaccttaatactaaattagcagttcttttgcccaatttttttttctgggggttaggtctgctcctgccagtggagatggtgagggtgaggatgggagcagcggttcttggggtggcagtggtggtgttggcgtgtgttttgggagcaagagcagatggctccgatcatagatacaaggatggagattatgtcccgctctacgccaacaaggtcggccctttccacaatccaaggtaatgatgacatgattctcggcttctcgggcgcaatgtaaccgcattcggtagtttctttcttttcttttttgtttgtggaagtgtgggcttttcattgttttaccatgtttgcctgcctagagatttatgtgggctaggctgagattactgtttaaattatgttgctctgatgataggtttgacagctactgtttgtatgagtagaaatcagttttatgcattggtatcatttactccctccgtcatgaagactgccttccgtctagattcatagtactaggttgtgtgaaaaccggtactatgttgttatattttgggacagaggaagttgttactaatcagcagttgtgcaaaccttctttcactcctaggacttgggttttgctatactagttagtatactccactagcagttgttatagggccctatatgatttcatatccattgtacggtagttcaatcgtgtagaaaggtgctctatattgtgctcacaggttattggcaattcaatgtctcaacaacgaaatttacaagagatgacctgtgatgtattttatgttagctgcctgctatgatttctctgcctatctatttagctcattattaatcgagttgcctactgtgtactgcagtgagacgtatcggtactatgacctacccttttgtgcaccaggtttgtaatcttataaacaccatttttctagattgctagttgctaccgtcctctatggaaaattcttgggcatgttctctgtaggaacatataccaagtaatcccaatcattataccaaagtaaccgtatcgaaagtttcagtacttgagctgcatgtataatgttttgcttccaacttcctgtgtgcatctgtaaatcaatgtcaagcatgtagtagatgggtattaaaagaaaagaacacacaaaggttcttgaggaatcacatgcgctcaacaaacatccgcaagtctctggaaaatatacacccaataatgttcaatggagggactatttgcttcatatagctatcccttctattatttttttgatagtttttctgtttttaactgttcgcttgtaatagatcatccaaaggacaaaagggaagcccttggggaggttctaaatggtgatcgattggttgatgcaccatatgagttgaatttcaaggaagacaggaactccaaggttctttgccagaaatcattgtcgaaggtggaagttgcaaagcttcgagatgcagttgcaaaggattactacttccagatgtactacgatgacttgccattatggggattccttggtaaattggacaaggataaggagcagggcaatgcaaagtacctgctcttcaagcacatccactttgacataatgtacaacggtgatcgtgtcatagaaatcaatgttcagacagacccaaatgtggctgttgacatcacagaggacaaagaagtgcaagtagagttctcctattcagtgacatggaaaaagacagatattccttttgagaaaagaatggagaagtactccaagtcttcatctatgccacaacatctggagatccattggttttccataatcaattcatgcgtaacagtactactcctgactggtttcttggctacaatcctgatgcgtgtcctcaagaatgatttcatcaagtaagaccttaaccaatgtattctattctcatcagttggattatgtcttaactgaaggatatttaattttccatttcattaaagatattcccatgaagatgagtccctcgaagaccaagaagaaactggatggaagtatatacatggtgatgtcttccgttttcctcagcaaaaatctctttttgcagcaattgttgggtctggaactcagctgcttgccctgtaagaacatcttcagtttgatttatgctcagattcaaactttcttcacccaatcctaacaagtgacaaatgcttctcatttggtagtgcaattttcatcttcctccttgccatcgttggtgtattctatccatacaacagaggagcacttttcactgcccttgttgtcatctatgctcttacatctggtattgcgggatacacagccacctccttctatctgcaactggagggaacaaactgggtaaggactgcttcaatggtgcagctatcaaggtactaaagtctattatatttttttgctgctgtgtgttaacacattctatcaatgtttcaggtcaggaatctgatattgactggctgcttattctgtggacctctcttcttgacattctgcttcctaaacactgttgcgatagcgtacagtgctacagcagctttgccttttggtactatcattgtcattattctcatctgggcccttgtaacctctcctctccttgtgttgggtggtattgctgggaaaaatagtaacacagaattccaagctccctgccgctcaacgaaataccctagggaaattcctcagctaccctggtaccgaagcaccattcctcagatggcaatggcagggttcctccctttcagtgctatttacatcgagctgtactacatatttgccagcatctgggggcataagatatacaccatctacagcatccttttcattgtgttcattatcctcatcatcgtcaccgcgtttgtcactgtggcacttacatacttccaacttgctgtcgaggatcatgagtggtggtggaggtcagtgttcagaagatcaattcttcttgatttgttaaatccttgcatattgattttttttctcttattgttcatatttactgctctaccatttttgctcaactagacaaataaaaactaaaaatggaaagctcggggaattgtgcaaaaaagaaatcacttgatagattgctaacttcagagtttatctgagagtcgtatgtatagaatgctttagctatgcataagaaaacagaaacttataaacacgcgagcatgcaccaaaaaatagaacactagaagtttgtaaagcaccagagctttcatgaaatcttcaatgacatttccaaatggtgctctctttttggtgtctactgtgctgtatcaactggaatatgggaataggttggcactaaattaagatgctgaatcaggatctattaagactagagggatcaaggatatagtgaaaatatgacatcttagagatgtttgaagtaaaaaaagccatgtgttcggcagccatgtgttaggcaaccatgttggaagcatcatattcatagtttaatctctttgctctactcttacattttcaacctgtgtccatgttgctctttgcacttgatctttctggtggaataaaaaccatgatggaagcatcatatccatagtttaatttctttgctcttacattttcaacctgtgtccatgttgctctttgcacttgatctttctggtggaataaaatctgtgattatgtgcgtgcagatcggtcctttgtggaggttccactggtatattcattttcttctactgcatctactactaccatgcccgatcagacatgtcaggcttcatgcagacatccttcttcttcggctacatgacctgcgtctgctatggcttcttcctcatgctgggcaccgttggtttccgcgcatcgctgctgtttgtgcggcacatttaccgctccatcaagtgcgagtaacctagactgcagtgacagacatcagacatggctgccactagggcagcttgtgagaaccaaatgcacaacctgttccaccagattgtacctgaattttgtgcctgttgttaatgtgaaccaattctctcttgtgtttactgtttgcatcatcttcttgcacttctccagagaaggctattatagtgtaggacatcaatcagagccaccgtacaatgatatatatatatatgtatctcctcttgttgagttcaatgtaaccttctaatttgttcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0162000, RefSeq:Os08g0162000