Os08g0163600

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0163600| Description = Harpin-induced 1 domain containing protein| Version = NM_001067601.2 GI:297608013 GeneID:4344740| Length = 1022 bp| ...")
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Gene Name

Os08g0163600

Description

Harpin-induced 1 domain containing protein

Version

NM_001067601.2 GI:297608013 GeneID:4344740

Length

1022 bp

Definition

Oryza sativa Japonica Group Os08g0163600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3740502..3741523

Sequence Coding Region

3740502..3741414,3741501..3741523

Expression

GEO Profiles:Os08g0163600

Genome Context

<gbrowseImage1> name=NC_008401:3740502..3741523 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3740502..3741523 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcaatggtggtgcatggcgtgcaaagtggagattccaaaccttcctctccaccaacaagtcctcctccggcgcaggcacgccacgccacgccacggcgtggacaaggccgagcacataaggcggccgccgccgcagccgcagccgcagccgcagccgcagcaaaagcttcgctgcatctcacaatgttaagcgcggcgaacggcggcggcgtccaccatgatcaccggggtgattacccccccgaccagcggtacggcaacggcggcgaggaggccagacaacagcagccttcgtggcagccgccgcgggaccaggtgacgcaccacccgcgggggcggagggcgcaccggtcgggcccgctggagtggacggcggcggtggtgttcacggtgctcgccgtggtggtgctcgtcgcggcggtggccgtgctggtggtggtgctgctgctgcagccgcgggcgccgtacctcgccatccggtcggcgcggctcgacgacctcgtctacgaccagcaaggggcgctggaggcggcgctgtcgctgggcgtcgccgccgagaacggcaacgcgaggtcgggcgccaccttctccgacttcgagctccgcctcgtgttccaccgcgtggtcatcgccatccttcgcgccgacccgttcgacgtcccgcccaaggggtcgctgccgctgggctacgtggtgcgctcgtcggggatcccgctggacagctccggcatggccgccatggaggcggcgctcgccgacggcgtcgtgccgttcaccgtgtccggccaggcgagcacgcggtggaaggtgggtggcctcgtcccgttcaagtactggacgcgcctacgctgcgacctccgattcttctggcccaatggcaccgccgtcgacctcagctgcagctccaagcccaaatccaagagcagctag</cdnaseq>

Protein Sequence

<aaseq>MAAMVVHGVQSGDSKPSSPPTSPPPAQARHATPRRGQGRAHKAA AAAAAAAAAAAAKASLHLTMLSAANGGGVHHDHRGDYPPDQRYGNGGEEARQQQPSWQ PPRDQVTHHPRGRRAHRSGPLEWTAAVVFTVLAVVVLVAAVAVLVVVLLLQPRAPYLA IRSARLDDLVYDQQGALEAALSLGVAAENGNARSGATFSDFELRLVFHRVVIAILRAD PFDVPPKGSLPLGYVVRSSGIPLDSSGMAAMEAALADGVVPFTVSGQASTRWKVGGLV PFKYWTRLRCDLRFFWPNGTAVDLSCSSKPKSKSS</aaseq>

Gene Sequence

<dnaseqindica>110..1022#1..23#atggcagcaatggtggtgcatgggtgaggtagcccaggatcagaattctccctttgctcccatttctttaaccctccaagcaaagcttcctcctctgtcgtatgatcagcgtgcaaagtggagattccaaaccttcctctccaccaacaagtcctcctccggcgcaggcacgccacgccacgccacggcgtggacaaggccgagcacataaggcggccgccgccgcagccgcagccgcagccgcagccgcagcaaaagcttcgctgcatctcacaatgttaagcgcggcgaacggcggcggcgtccaccatgatcaccggggtgattacccccccgaccagcggtacggcaacggcggcgaggaggccagacaacagcagccttcgtggcagccgccgcgggaccaggtgacgcaccacccgcgggggcggagggcgcaccggtcgggcccgctggagtggacggcggcggtggtgttcacggtgctcgccgtggtggtgctcgtcgcggcggtggccgtgctggtggtggtgctgctgctgcagccgcgggcgccgtacctcgccatccggtcggcgcggctcgacgacctcgtctacgaccagcaaggggcgctggaggcggcgctgtcgctgggcgtcgccgccgagaacggcaacgcgaggtcgggcgccaccttctccgacttcgagctccgcctcgtgttccaccgcgtggtcatcgccatccttcgcgccgacccgttcgacgtcccgcccaaggggtcgctgccgctgggctacgtggtgcgctcgtcggggatcccgctggacagctccggcatggccgccatggaggcggcgctcgccgacggcgtcgtgccgttcaccgtgtccggccaggcgagcacgcggtggaaggtgggtggcctcgtcccgttcaagtactggacgcgcctacgctgcgacctccgattcttctggcccaatggcaccgccgtcgacctcagctgcagctccaagcccaaatccaagagcagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0163600, RefSeq:Os08g0163600