Os08g0163900

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0163900| Description = Protein of unknown function DUF569 family protein| Version = NM_001188467.1 GI:297726064 GeneID:9272390| Length = 23...")
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Gene Name

Os08g0163900

Description

Protein of unknown function DUF569 family protein

Version

NM_001188467.1 GI:297726064 GeneID:9272390

Length

2329 bp

Definition

Oryza sativa Japonica Group Os08g0163900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3751428..3753756

Sequence Coding Region

3751428..3751455,3752014..3752092,3752620..3752872,3753079..3753756

Expression

GEO Profiles:Os08g0163900

Genome Context

<gbrowseImage1> name=NC_008401:3751428..3753756 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3751428..3753756 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggttttcgacgacgtggtgttcgcgcggctgcggagccatgtgtacggctcgtacctccacgccgacgaggacgggaggtccgtctaccacggcagcctccgcggcggcgcctcgcagcacaacgcggtgtgggccgtggaggagttgctcgtacctgctcttccgtggaggagttccgcggaggaggaggaggccgccacgcggtacctgctcctccgcagcgcctacggccggtacctcggcgccaccgacgcggcccccggcgaggccgcccgcaacgccaccgcccgcgccgccgccgccagctctgacgtccgccaaccacacgaccgcgagggttgctgcggctgctgctgctgctgctgccgactccccttcggcttggtcgaggccacgcagcgcgaccgcgatgaggaggagccggaggtcgacgccatcatgtggctggcaaccaggtgcggcgaccaagacgtacaagaggatcgcgacgcccgcggcgtcgtccttctgcgcgacaggtccgggcgctacctgcgctgcaacaagagtatcctggcttgccgccgcagcatctcagtcgacgccaacttcgaggacgaagatacgttgctgtgggaggtggtgcgcgtccccccgagtgaagacatgccggagctcccgatcgccactcagccgctgcgggagatccagttcgtggacgaagccgacctcgacaacatcagcgagggagaaaactgggctacggttcagatcagagggaggtcggtgaggctcctgagagagaagatcgcggagcttgtgggctacgacgacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatcgacctgcctcgccgccgggagaccctgcagatcgtccttgtcaggcccaacaccgaatcgtatgatcagttgatattcccgaatccgaatgcattgccgtcagccgaggccacagatgaagacgatcccacgattgacattcagggtttgtcccagtccttgtaa</cdnaseq>

Protein Sequence

<aaseq>MEVFDDVVFARLRSHVYGSYLHADEDGRSVYHGSLRGGASQHNA VWAVEELLVPALPWRSSAEEEEAATRYLLLRSAYGRYLGATDAAPGEAARNATARAAA ASSDVRQPHDREGCCGCCCCCCRLPFGLVEATQRDRDEEEPEVDAIMWLATRCGDQDV QEDRDARGVVLLRDRSGRYLRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSEDM PELPIATQPLREIQFVDEADLDNISEGENWATVQIRGRSVRLLREKIAELVGYDDFTM CVSAGRHGQFTPLLIDLPRRRETLQIVLVRPNTESYDQLIFPNPNALPSAEATDEDDP TIDIQGLSQSL</aaseq>

Gene Sequence

<dnaseqindica>2302..2329#1665..1743#885..1137#1..678#atggaggttttcgacgacgtggtgttcgcgcggctgcggagccatgtgtacggctcgtacctccacgccgacgaggacgggaggtccgtctaccacggcagcctccgcggcggcgcctcgcagcacaacgcggtgtgggccgtggaggagttgctcgtacctgctcttccgtggaggagttccgcggaggaggaggaggccgccacgcggtacctgctcctccgcagcgcctacggccggtacctcggcgccaccgacgcggcccccggcgaggccgcccgcaacgccaccgcccgcgccgccgccgccagctctgacgtccgccaaccacacgaccgcgagggttgctgcggctgctgctgctgctgctgccgactccccttcggcttggtcgaggccacgcagcgcgaccgcgatgaggaggagccggaggtcgacgccatcatgtggctggcaaccaggtgcggcgaccaagacgtacaagaggatcgcgacgcccgcggcgtcgtccttctgcgcgacaggtccgggcgctacctgcgctgcaacaagagtatcctggcttgccgccgcagcatctcagtcgacgccaacttcgaggacgaagatacgttgctgtgggaggtggtgcgcgtccccccgagtgaagacatgccggagctcccgatcgccactcaggtgagcttctccgatccttttcccctctcttcttgcgattcttgtttttttgttttgtgtcttgatgctgatttcgtcggagattaatcttgatttcttgcaagaactaaccgtgcagtacaatttgtggattgatcgaatttctttctgctaccattgttgattttgcgcagcccgggttcttcgtcagggtgtgcttcccccagccgctgcgggagatccagttcgtggacgaagccgacctcgacaacatcagcgagggagaaaactgggctacggttcagatcagagggaggtcggtgaggctcctgagagagaagatcgcggagcttgtgggctacgacgacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatcgacctgcctcgccgccgggagaccctgcagatcgtccttgtcaggcccaacaccgaatgtaagcagcctagttaaatatgaatgttgctgaattttctgaacaatgtttatgtggttctgaattttgctgtgaattctagtaacggatggcatggagtgggcagtgtctctgtttttttgatttttttttgtgtcagatcagcactgtagattttctagctttcagtagtttgtgcctgtttggaatttcctgaaaatgcagtgatgatgtatttgcagaacttatctttcagtagagttaggatttgtctgaagaatactgtagaacagcagaactgcagaagtgaaatatatctgcacttatctgatgaatattcattccagtcatcatcagacaattgtgtgcaccttgggtttaactgaatgctgtaggattcatctgaatgttgtagatttttcggtgtgaaattcagcattcgagtagcattttaacatgtgaattactggcactgtttttacttacaagagctgtaattcttgtgtattactctttctaactgcgtgatttgtttgctatggctgcagcgtatgatcagttgatattcccgaatccgaatgcattgccgtcagccgaggccacagatgaagacgatcccacgattgagtgaatccttttgtgctcaagttctgacaggctcagggaactcgacagaagattagtgtgttggtatagagtggaattttcagttcagccgatgctggaatgcagttttacgttctctcagctgtagaatggctgaaaaacctcaaattgtctgtgtgttcagtgggtgtttttcgacggtttacgtactttgaaaccggtaaaacagggctttctgacgaaaatattggttttggtgacagttagtattcatgcctagtattgattgatgacaagaatgtgcttaatcctgcaatatattgctattcatgctagacttggttacaaatatgcatagcgtgtctgaattctgatgagtggttccagtagctgaatgtctgaatctcctgtagcattcaggtttgttctagtctatgtattttggaattttgataggttccggtttgcaaatgctacatgctagtatctgctggttctaaacttactgattaccctaaaccaattgttggatccagaagtaaagtacacaggattaagactatgtctgatgccctgaagcattcagggtttgtcccagtccttgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0163900, RefSeq:Os08g0163900