Os08g0179900

From RiceWiki
Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0179900| Description = Conserved hypothetical protein| Version = NM_001067670.1 GI:115475076 GeneID:4344817| Length = 2543 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0179900

Description

Conserved hypothetical protein

Version

NM_001067670.1 GI:115475076 GeneID:4344817

Length

2543 bp

Definition

Oryza sativa Japonica Group Os08g0179900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4671778..4674320

Sequence Coding Region

4671835..4672217,4673053..4673197,4673646..4673739,4673865..4674145

Expression

GEO Profiles:Os08g0179900

Genome Context

<gbrowseImage1> name=NC_008401:4671778..4674320 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4671778..4674320 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggaggcgtcatgcgcaccgcggccgcgaaggtcggaatcgccgggggcgcggccgccgcggcggcggcggcgggcgggggcaggttccgccacgtggcgccggcgttcgccacggccgcctccgcggaggccgccgcgccgacgctggtgtccgcggcgggcggcggcggcggtggcgaggtccccgcggtggcggcgtcgggggcgcagtgggcgtcgtcgtgggaggtggacgactgggagttcgcggactggagggacgtggcggcggcggagcccgaggtgacggcggccgggaagccgaggctggtgttcgcgccgccgtcgcgggaggaggccgaggaggccaccaccgagctcagggacgccatagacagggtttatttttctgaggctcccatagaagttgtgaaagaacaggataaagatcttagcaagctgggagccgatgcaataattcctgctatgccaggacatgtgatgcaagcttttaccttgttgaaatcaagcccagaggcacagggtgttgttgcatctcttgcctctgataaaaatgtctgggacgcagtgttgaaaaatgagaaggtcatggaattttacaagacgcaccagcaaagtctggtttatactttccctgagggcactgcctcggtagtttcacctgagaagcttgcagacgcctcctcagagaattcatcctccggggagaagcctgagagctccccttttgcagacttcatggataatgcaaggaagacggtgatcgacattgtgaacaatataaccaactttttccaagatatgttccgcaaacccaatgaagccgagattcttggtggatcattcatggctctggccatagcagtcatcctgttaattatgtttaagaaggcgtga</cdnaseq>

Protein Sequence

<aaseq>MGGGVMRTAAAKVGIAGGAAAAAAAAGGGRFRHVAPAFATAASA EAAAPTLVSAAGGGGGGEVPAVAASGAQWASSWEVDDWEFADWRDVAAAEPEVTAAGK PRLVFAPPSREEAEEATTELRDAIDRVYFSEAPIEVVKEQDKDLSKLGADAIIPAMPG HVMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVMEFYKTHQQSLVYTFPEGTA SVVSPEKLADASSENSSSGEKPESSPFADFMDNARKTVIDIVNNITNFFQDMFRKPNE AEILGGSFMALAIAVILLIMFKKA</aaseq>

Gene Sequence

<dnaseqindica>58..440#1276..1420#1869..1962#2088..2368#cctataggaggaggcaaatccaaacgaaggagagagagagagctcatcgccatcgccatgggaggaggcgtcatgcgcaccgcggccgcgaaggtcggaatcgccgggggcgcggccgccgcggcggcggcggcgggcgggggcaggttccgccacgtggcgccggcgttcgccacggccgcctccgcggaggccgccgcgccgacgctggtgtccgcggcgggcggcggcggcggtggcgaggtccccgcggtggcggcgtcgggggcgcagtgggcgtcgtcgtgggaggtggacgactgggagttcgcggactggagggacgtggcggcggcggagcccgaggtgacggcggccgggaagccgaggctggtgttcgcgccgccgtcgcgggaggaggccgaggaggccaccaccgagctcagggacgccatagacaggtgaaagattgcaagattttaggagccttgattgccaattcgtcgaattgaccagggttcggggaggccgtatatttttcccctttttactgttgagaggggataaattggggattttttttcccccttagatgctttttgggattgtctcgattatcaattagcacttggtgacctgtcccttatgatttggatttcgaatggttagggttcggatttcggagttcatactgtcttagatttggggatgttactgattggatggtttgcagaatctattttagacttttaggattaaggaatgggtcacatattttgttagagcgtcgaactgtggaattaaaatcgtgctgtgtggtgatcaaccatgggccagttcaggggactcctcattcaaaactgagaaatacattaaaaatgatagattatgctgcgttgttactatattttagaacacgaaattgaaatgatcttttgtgttctaaagtctagataaatatgacaaaattattgtttgccgttgttgctaagcactctacacattactacccctatcagcttttttttgtaccaaccctatcagcttaaattgaaagatgaatccagttttaggtttataactagccttcgttcatgtgttaattcagcaactaatcatggaatatacctacgcctattcatgctttgttggcaagagaaaatattttgtgcatttcattaaatttcgaatgctgcactgagtactgtaatctgcatatgcacagttttctttatctttaaatttaatttgagattagtacatatttatttggttgttatgaaatgattgctgtagggtttatttttctgaggctcccatagaagttgtgaaagaacaggataaagatcttagcaagctgggagccgatgcaataattcctgctatgccaggacatgtgatgcaagcttttaccttgttgaaatcaagcccagaggcacaggtttgtattatattactttattgttgttttaatcaatctccgtcagctgttattatgatcatatctatttctgagttagggtatctcatattatttgtgttcatatattttttatgaacgaatatatacatcaggaaaactttatgcactattgttgctgaggatgtactgtgtttagaaacttggaagtcatcaatcagtttttggtttgtgtatttactgttatcatgtgccctttttatatttagtatttttgcatgtttcagtgattacatagtatacactccatgttgagggttcgtagttcagacttcacatatgagcatggcacttcatcattgcataatttttgtgttggttgattgctcaccatggatgcaacttttaattcagcttgattcattctgatggctcatgtttcactaatcttgtttttattggtctccagggtgttgttgcatctcttgcctctgataaaaatgtctgggacgcagtgttgaaaaatgagaaggtcatggaattttacaagacgcaccagcaaagtatgtaccacctcgattactaaccattcgccattttatatctcctatttgtctttcaaccaaactgtattacccttatttcctttcttgagatgatacaataattacatcttcctatgacacaggtctggtttatactttccctgagggcactgcctcggtagtttcacctgagaagcttgcagacgcctcctcagagaattcatcctccggggagaagcctgagagctccccttttgcagacttcatggataatgcaaggaagacggtgatcgacattgtgaacaatataaccaactttttccaagatatgttccgcaaacccaatgaagccgagattcttggtggatcattcatggctctggccatagcagtcatcctgttaattatgtttaagaaggcgtgagattttggttcgacctcccttgggaatgattgtgctttaaattcgtcgaaaataactggcatcgtattattaagtactactacaatgtaatactatatagctgtgtctactgcgtccttgaatatatttgaggacacaggacagtacaataaagacatcgttttatctaatatct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0179900, RefSeq:Os08g0179900