Os08g0191000

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0191000| Description = Auxin Efflux Carrier family protein| Version = NM_001067704.1 GI:115475144 GeneID:4344852| Length = 2346 bp| Defini...")
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Gene Name

Os08g0191000

Description

Auxin Efflux Carrier family protein

Version

NM_001067704.1 GI:115475144 GeneID:4344852

Length

2346 bp

Definition

Oryza sativa Japonica Group Os08g0191000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5321772..5324117

Sequence Coding Region

5322426..5323793

Expression

GEO Profiles:Os08g0191000

Genome Context

<gbrowseImage1> name=NC_008401:5321772..5324117 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5321772..5324117 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattggctgtccgcgaacctgcaggtgaaccctcaggtgactgtccatggggactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcggccttgtgctgtccaacccgaggacgcagatcatccccaaggccaccttcaagctcctgagcaagctcgtctttgcgctgttcctgccatgcctgatctttgtccaccttggccagtcggtcacaattcagaacatcctcgactggtggttcatcccggtcaacgtgctcatcagcacggccatcgggtgcattcttgggtacatcgtcgcgctgatctgtcgcccgccgccgcagtttttcaggttcacggtgatcatgaccggatttggcaacacgggtaacctcccaatcgcgatcatcgggtcggtttgccataccacggatcacccctttggtcctggatgccaccgcaagggtgtcgcttatgtttcgtttgctcaatgggtcgctgttattcttgtctacaccttggtttaccatatgatggagccaccgatgcaattctacgagattgtaggcgaagggaacgagattgtggaagagcctgcacagatcagcaactacagtagatctctgcttcatgaagcggaatggccagggatggctgacaaagaaacggagcactcaaagacgccattcattgcacgggttttcatgagtatttcaggctcttcacagaatacatttcctgatattgattttgcagaagagggcacttctggtgctggacctagcagtccaaaatcgctaaggtgtttggcggagccaaaggttgtaaggaggatcagggttgtagctgagaagactccaattcagcatgttctccagccaccaaccatcgcctccttgctcgccattgtcatcggcatggttcctttgttcaaagattttgtgtttgtgcctgatgcaccactgtcgttctttacagacagtttggagattctagctcaagccgttgtaccctcggtgatgttaattctagggggcatgcttgcagaaggacccaaggataatgccttgggtatccggactatcactggtataattgttgcaaggctcctgattctcccgtgcattggcatcggtgtcgtcctgctggcagatcggttgcatctgcttgtcgaggaagaccacatgtaccgctttgtgctgtcgctacagtactccacccctagtgccatcctgcttggagcgattgcgagcctcagaggttatgctgtcaaggaagcatcggcacttctattctggcagcacatttgtgcggtgctatctctctccatctacctgatcgtatatttcaggttgcttaccatttga</cdnaseq>

Protein Sequence

<aaseq>MDWLSANLQVNPQVTVHGDWVSAVMPLMKLLCLTVIGLVLSNPR TQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNILDWWFIPVNVLISTAIGCIL GYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCHTTDHPFGPGCHRKGVAYV SFAQWVAVILVYTLVYHMMEPPMQFYEIVGEGNEIVEEPAQISNYSRSLLHEAEWPGM ADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTSGAGPSSPKSLRCLAEPKVV RRIRVVAEKTPIQHVLQPPTIASLLAIVIGMVPLFKDFVFVPDAPLSFFTDSLEILAQ AVVPSVMLILGGMLAEGPKDNALGIRTITGIIVARLLILPCIGIGVVLLADRLHLLVE EDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEASALLFWQHICAVLSLSIYLIVYF RLLTI</aaseq>

Gene Sequence

<dnaseqindica>655..2022#actcttgcttgcctctctgcgtgatcccgatctgcagagctcgccgccggcgagctaagccccggaggcgcgcgcgtggacgccccccccccccttctcctccgagcagcggccaccggtggccgccgccgccatctcggtctcgaatcgaggtggacaggtattcgttctcgtctccttcctcttccccgcgccgcttgatgagtcgttattagattggagatccatcagggatggctgggttgatttgtttccctcagaattacgcatgagtttttttcttactgcggtggtagtgggttagtcagcgacagccgtttgttaccaaggaaaatatttttgggggtgttggtttggcttttgttcttgtttggtttgttttgatcagcaaaatttttcacttttgcatcatcagcagatctgtctgtccattataaccacactattgatgctcttatccatcaattcctgaatcatatcctttctctttttttgcagaaaaaagtcatcagctttctgcatgcgatttggtagatactgacacgtcttgattctgctcaaggaaggcagctgattgattggttgggagggcaaactaaaaggggtgtaatcttggccaattcgatagaaaaacacagagatttagtggcgagaatggattggctgtccgcgaacctgcaggtgaaccctcaggtgactgtccatggggactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcggccttgtgctgtccaacccgaggacgcagatcatccccaaggccaccttcaagctcctgagcaagctcgtctttgcgctgttcctgccatgcctgatctttgtccaccttggccagtcggtcacaattcagaacatcctcgactggtggttcatcccggtcaacgtgctcatcagcacggccatcgggtgcattcttgggtacatcgtcgcgctgatctgtcgcccgccgccgcagtttttcaggttcacggtgatcatgaccggatttggcaacacgggtaacctcccaatcgcgatcatcgggtcggtttgccataccacggatcacccctttggtcctggatgccaccgcaagggtgtcgcttatgtttcgtttgctcaatgggtcgctgttattcttgtctacaccttggtttaccatatgatggagccaccgatgcaattctacgagattgtaggcgaagggaacgagattgtggaagagcctgcacagatcagcaactacagtagatctctgcttcatgaagcggaatggccagggatggctgacaaagaaacggagcactcaaagacgccattcattgcacgggttttcatgagtatttcaggctcttcacagaatacatttcctgatattgattttgcagaagagggcacttctggtgctggacctagcagtccaaaatcgctaaggtgtttggcggagccaaaggttgtaaggaggatcagggttgtagctgagaagactccaattcagcatgttctccagccaccaaccatcgcctccttgctcgccattgtcatcggcatggttcctttgttcaaagattttgtgtttgtgcctgatgcaccactgtcgttctttacagacagtttggagattctagctcaagccgttgtaccctcggtgatgttaattctagggggcatgcttgcagaaggacccaaggataatgccttgggtatccggactatcactggtataattgttgcaaggctcctgattctcccgtgcattggcatcggtgtcgtcctgctggcagatcggttgcatctgcttgtcgaggaagaccacatgtaccgctttgtgctgtcgctacagtactccacccctagtgccatcctgcttggagcgattgcgagcctcagaggttatgctgtcaaggaagcatcggcacttctattctggcagcacatttgtgcggtgctatctctctccatctacctgatcgtatatttcaggttgcttaccatttgaaagatgatggccggccgccttccaaaattggtttgtagcattcatcctcggaagtgatttctagggagatgggtacttgaatggattttcaaccacgtctccttatggtcaagtgtatttatagtatatttaatttttttttagcgatttatatttcagatacatgtagaacttgagaacatgagatatgttcttgtcgttcattagtgtcaatatattgctgttcgcttgcacatttcttgatccgattacagcattacagttgctgctcaaaagttgtacaagtactgctacattagaagtcaatatattgctgtttgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0191000, RefSeq:Os08g0191000