Os08g0192800

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0192800| Description = Bromodomain containing protein| Version = NM_001067712.1 GI:115475160 GeneID:4344864| Length = 2119 bp| Definition ...")
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Gene Name

Os08g0192800

Description

Bromodomain containing protein

Version

NM_001067712.1 GI:115475160 GeneID:4344864

Length

2119 bp

Definition

Oryza sativa Japonica Group Os08g0192800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5417275..5419393

Sequence Coding Region

5417405..5418616,5418704..5418872,5418992..5419056

Expression

GEO Profiles:Os08g0192800

Genome Context

<gbrowseImage1> name=NC_008401:5417275..5419393 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5417275..5419393 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgtccgccgtgctcgccggccggaatgaggtccaccaccaccaccaccaccactgggccgacgcccgcgtccccctcatgcccaagcacgccaccaaccctaaccctaggcggcaccaccggccgagccccagcatcccgccgccgccgccgccgcagcggccaccggcggcgactgtggccccgtccgtgccggatccctccccgtcgggccacgtgacgatccgcccctccgagctgtcccgcagggaggcccaggtgctccgcgcgcggctcaccggcgagctcagccgggtccgcgccctcctctccgacatcgacgggtgggaggcgcggcggcggcggccggcggagcctccgcgccagcgggggcacgtgtcgccgcccccggccctccaggcggcgatgcggaagcggtgcacgcagatcctgacgcggctgcggaagcagaagatcagcgtgtggttcaactcgccggtggacgtcgagcggctgaagctgcacgactaccacgccatcatcaggaaccccatggatctcggcaccgtcaaggagaacctcgccttcgggaggtacccctcgcatgaggcattcgccaccgatgtccgcctcaccttcagcaacgcgctgcggtacaatccggccgaccaccatgtccaccgctacgccagtaacctcctcgccaccttcgaggggttgtacaaggaggccttgtcctggttcgagcaggagtgccagcgtctcgagccgccaatgccgctcgctttgccgccgccgccgcagcccccggtgcctatgccgatgcaggcgccgccaaggattgggggtggggggaggaggccgaagcccaaggcgagggagcccaacaagagggagatgagcgacgaggaaaagcacaagttgagggtggagatcgggaatttgcccgaggagaaaatggggaatgtgctacagattgtgcagaagaggaataccgatccggcgctaatgggagaggtcgttgagcttgatttcgacgaaatggatgtcgagacgctgtgggagctcgatcgatttgtggtcaattgcaagaaggcgctcagcaagagccggaggactgtcgcgatgaacggtgatgctgttgatgcgactgctattgttccaactgaggacgataccgtgcaggtgaatgtgcatcatcagccttcggtggttgaaattggggactcggagaatgacacgccggagaagagggtttcagaggttgatatggttgatgagtatgttgatattggcgatgagatgccgacggcaaattaccagtcggtggagattgagagggatgcccaggtagcgagcagctcaagcgggtctgatagtggctcgtctgcatccagtgattctgactcgaggagctctggggactccgattcagacggggatgatgcccagtctcccgattag</cdnaseq>

Protein Sequence

<aaseq>MTSAVLAGRNEVHHHHHHHWADARVPLMPKHATNPNPRRHHRPS PSIPPPPPPQRPPAATVAPSVPDPSPSGHVTIRPSELSRREAQVLRARLTGELSRVRA LLSDIDGWEARRRRPAEPPRQRGHVSPPPALQAAMRKRCTQILTRLRKQKISVWFNSP VDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDVRLTFSNALRYNPADH HVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPPVPMPMQAPPRIG GGGRRPKPKAREPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEV VELDFDEMDVETLWELDRFVVNCKKALSKSRRTVAMNGDAVDATAIVPTEDDTVQVNV HHQPSVVEIGDSENDTPEKRVSEVDMVDEYVDIGDEMPTANYQSVEIERDAQVASSSS GSDSGSSASSDSDSRSSGDSDSDGDDAQSPD</aaseq>

Gene Sequence

<dnaseqindica>131..1342#1430..1598#1718..1782#ctcgtccccgaagcccagatccccaaccgggtccccgaacccgacaagggccgcccgagacccgataagcgatgccctcctctcgccgccggagatcgtgagatcgccgccgcggccctccccgccggcgatgacgtccgccgtgctcgccggccggaatgaggtccaccaccaccaccaccaccactgggccgacgcccgcgtccccctcatgcccaagcacgccaccaaccctaaccctaggcggcaccaccggccgagccccagcatcccgccgccgccgccgccgcagcggccaccggcggcgactgtggccccgtccgtgccggatccctccccgtcgggccacgtgacgatccgcccctccgagctgtcccgcagggaggcccaggtgctccgcgcgcggctcaccggcgagctcagccgggtccgcgccctcctctccgacatcgacgggtgggaggcgcggcggcggcggccggcggagcctccgcgccagcgggggcacgtgtcgccgcccccggccctccaggcggcgatgcggaagcggtgcacgcagatcctgacgcggctgcggaagcagaagatcagcgtgtggttcaactcgccggtggacgtcgagcggctgaagctgcacgactaccacgccatcatcaggaaccccatggatctcggcaccgtcaaggagaacctcgccttcgggaggtacccctcgcatgaggcattcgccaccgatgtccgcctcaccttcagcaacgcgctgcggtacaatccggccgaccaccatgtccaccgctacgccagtaacctcctcgccaccttcgaggggttgtacaaggaggccttgtcctggttcgagcaggagtgccagcgtctcgagccgccaatgccgctcgctttgccgccgccgccgcagcccccggtgcctatgccgatgcaggcgccgccaaggattgggggtggggggaggaggccgaagcccaaggcgagggagcccaacaagagggagatgagcgacgaggaaaagcacaagttgagggtggagatcgggaatttgcccgaggagaaaatggggaatgtgctacagattgtgcagaagaggaataccgatccggcgctaatgggagaggtcgttgagcttgatttcgacgaaatggatgtcgagacgctgtgggagctcgatcgatttgtggtcaattgcaagaaggcgctcagcaagagccggaggactgtcgcgatgaacggtgatgctgttgatgcgactgctattgttccaactgaggacgataccgtgcaggtgaatgtgcatcatcagccttcggtggttgaaattggggactcggtatggcaatgttgcaatcctttgttctgtgtaatgactaatgcttgaattgtgttctcatgttttgtttatgttgcacttttgcaggagaatgacacgccggagaagagggtttcagaggttgatatggttgatgagtatgttgatattggcgatgagatgccgacggcaaattaccagtcggtggagattgagagggatgcccaggtagcgagcagctcaagcgggtctgatagtggctcgtctgcatccagtggtatggcggaacaaatgtgaattatgcccccgcagtttctgtttcatatttgaattgctctgacatagcagtttctgtttcgtagttgaattgctctgacacagaaagtgtttctgcagattctgactcgaggagctctggggactccgattcagacggggatgatgcccagtctcccgattaggtggtgcttcttcctctaacaataggattttagtggttttattaggtgactgaggtccattttggcaacgtatttttagtagcgtggtataggaaattggatgggttcttgttcaagttgttgtgagctatgttcgtgtgtgcgcctgcattcaccttaggttgttggtagtaatggatagctagtttatgtgggtagtttggcaaacgaagaccattgtaaagaagggaatataatcgaaggaaaagagaaaggtagcaatgtgttagcatttaatcatgagttcgtctcaaatcatcttattatgtttttgtgcctgctgtctttgttctgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0192800, RefSeq:Os08g0192800