Os08g0193100

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0193100| Description = Similar to Geranyl diphosphate synthase| Version = NM_001188488.1 GI:297726106 GeneID:9272514| Length = 4388 bp| De...")
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Gene Name

Os08g0193100

Description

Similar to Geranyl diphosphate synthase

Version

NM_001188488.1 GI:297726106 GeneID:9272514

Length

4388 bp

Definition

Oryza sativa Japonica Group Os08g0193100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5434579..5438966

Sequence Coding Region

5436875..5436913,5437855..5437952,5438066..5438072

Expression

GEO Profiles:Os08g0193100

Genome Context

<gbrowseImage1> name=NC_008401:5434579..5438966 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5434579..5438966 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtttatgcagatgagaataactccaatacaacgttgcagaagtcatattacaagacagctgcattgatttcaaacagttgcaaagctgttgcggttcttgctggccaaacagctgaagttgcgacgcttgcttatcaggtatag</cdnaseq>

Protein Sequence

<aaseq>VYADENNSNTTLQKSYYKTAALISNSCKAVAVLAGQTAEVATLA YQV</aaseq>

Gene Sequence

<dnaseqindica>2297..2335#3277..3374#3488..3494#agtccactccctctctcgaaacgcatctcgccggccggtggcggcggcgcgcgcagctccggcgacctcccggacggccgccgccatgctactgccgaggcgtcttcctcttcttgctggtctcctgcgctcggcctcctccgacgcctcctccattcctccaaaccgaaaggtgaggggagacgactagatgaggggcatgacatttctgattcccccccgccgtgctagccgctgaatgcgagaattttgctgcagcagccaacattttttgggcagtttaggcttacaatggcgtcgaatccccaactactcactacttgctcaaattaaccctgatgtatgcggcatcagactatcagagtacattgtttgtagcgtggaagttgattagatttgtttgtgtaatgctttaacatcacgttcttgtttgcttcacagaatgtctcaggtagagaagggtttctatggagttcatgttattttcacagcacaaggcatcagacatccagagaaggggagcagatggctaaggtacagataagccatgcgatttaggtgttctattcttaagcaggaaattagaggctgtgatcctgttaaaacacacattatgaagataaaaaacttaggatatttattctgccaatataaccataaatttctgttgtctggatctgatgtcctggcataatcttttattttttctgtatagtaggagctgctagacccccttgcactgattaaagatgaagtatctgaaatctcaaatagattgcgctcaatggtggtagctgaggtgaatgctctaacaacaattttatactgtgagatgctatataaatgtatgatggcacgaatccttcaccatttgtctttgtatctcctcatgtgaaaagattatcgttgtatctatgaaatacatcatgaccaggtaccggaactgacgttagcagctgggtacttcttcagagctggagctgaagggaaaagaacttgccccactgtaaggacagactttaataagggtgtaattgaatatcttgtgattgtgctgcagacgcaagttacttataatatgcatacatgctaacaatttactcctgccaatttcatcattagaagcgcctggtcattgatgtgtcaggttctactattgatggcttcatctataagcatggacatggctgacccaattgttggttcaaagaatgagattcgtgagagatatatgcgtcttgctgagataactgaactgattcatgtataagtccaacctagctgtttcatttaactttttaccccttccagaattatttatatcaatgacttatctcctacctggcaccttaggtaacaagccttatccatgatgatgtcttggatgatgctaataccaggcgtggcatggactcactgaactgtgttatgggaaagaaggtaatataacaatgtgtttataacaaggatagttgatgtcttatgatatttgcaacaaggaaaaagcagtttgacaatataatctaatgcttgtaagcttgttttgttgaatggcaaaatgaaatatggaagatgtaatttgaaaagtatatcttgattcttgagctggtggatttcagtttgatagaacatactatgtattaaatagcactgattgaactactttattttcactatttagtagttctcacaagccaattatcatcaatctcttttactcttgaatgtgcaggcaagcccatttgttctattatctgcttcacaatatcaaatctctcctctttctttttggacacacttctttgttcagcacatcttgatcgcattttgatgtatctagcttccatttacacaatatgtaccaaataattagtgaatcgatgctctcttgcagcttgcagtgctggctggtgattttctactctccaaggcattttctactgctgcggtgtctcttgacaatgctgaggtgtgactgtttatcctttgtttgttagtgcaataatcatgttccatccttattttattctgttgttgatttcgatacctagaatgaagttaagtatacatgttgataaattaagaaaaaaaaaacagagaaccaatttgttttaattttggtgtgtcatctgccatgatgccttgcattgttctccatttcttgcaacatcagattttatcagttgcatttcagcatggaccttttgcagggccataacatcaaggttatcccatttttttctctgcaggttatattgttgctagcaacggctgtaaataaccttgtaactggtgagtttatgcagatgagaataactccaatacaacgttgcaggtgcatgtccaattcattaatcacttttcttggcatttaagctattcctgggcaatgggacttttcctagtgatagagcgcacaaagagcttgagagaaaaatatagtactaacttcattgtgatgcaatttatatgtgctccacaagtgagcaatactacttataccattcagtggcaaagccagggtttagatacagaaggggggggggggggcagcttgccaagtgacaacagttataaaaattaatggtgaatatcccacaagttgcattgctgttttagaactactaactactaagataagaagcattgatctaatggttgataattcatacatgctttaatccaatggcaaatatgatttgatgatacggctaaatgcgagagttcttttgtagcaattagtgtaattggtggattgtatctatataaaaatagatgatataaataataaaacttttgggttgatagtttgaaaaaaaaagatatttttgcacaaaaagctaggttccaaaaattcatcggaaaacaagtgcataatagaggcaaatgtcaaaccaagcatgtatactagaaaatgatttgctacgtggaaggagacctaatacacctaagtccaacacataattagcatgattatgagctaatcctctagggaaagcaatggcttgagggaggccaggcctccctccgcccctccctggcttcgctgctgataccattcatattttaaataggtcacttgtgataaagtatcagcttaaaaaacctgagatagtattgttctagacaaaagggaataagggactggaagaaattaaaatcaagttagggtaatcaattgcatggcaatccaattccaacacttctctctctctctctctctaactttatttaacaactgctgaatgcatatgcagcatggattactatttgcagaagtcatattacaagacagctgcattgatttcaaacagttgcaaagctgttgcggttcttgctggccaaacagctgaagttgcgacgcttgcttatcagtatggcaaacacttggtttgttatatatatatccatactcattatctgtttcttcttttgctaaccatgaactactgacaactgatgacttatttctgcattctcctgtcagggtatagcttatcagttgatcgatgacatcctcgatttcacagggacatcagcttcactaggcaaaggctccttgtctgatatccatcaagtattatcatcactcttggtcactatcatatcaaattcttacattactattattgactgacaattccatgttattatgttacgactagtgatctagttttgaggtttctttgttgggtgtacatcaaaacactgatttaattagtacagaagtgtgatatgcaaggaataataagtgctttatctgagcagggaattgtgacggctcccatattgtttgcaatggaagagtacccgcaattgcgcgtaattgtagaacagggttttgatgacccctcaaatgtagacgcagttagtaccgagactttatttcattcttctttctagtatggttcaaaattatttgagttgtgaaatgctctacagctaattaattcaattgggctcattttattttcgcaggcccttgcataccttgccagaagtaagggaattgagaggacaaggttacttgctgctgaacatgccaaattggcagcagacgcaatcgatgctcttcctgagagcaaggatggatctgtgctgatctcaagacaggcactcaaagatcttacagaaaagctcatcaagagaacaaagtgaaaatatatttataatcgatgagaagtgccattgggcagcagaatccttaaaagatctcatcatgttcttctttgtcaaatcattacagctgaaacctgcaagctaagctttggatgcatgttctacttctccaaattttaatgggtcagttttttatgggctgactccatcagttctttaggtctttaatgggctgaattctttcacacgctaaattgatttgcttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0193100, RefSeq:Os08g0193100