Os08g0193600

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0193600| Description = Cyclin-like F-box domain containing protein| Version = NM_001067716.1 GI:115475168 GeneID:4344868| Length = 2735 bp|...")
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Gene Name

Os08g0193600

Description

Cyclin-like F-box domain containing protein

Version

NM_001067716.1 GI:115475168 GeneID:4344868

Length

2735 bp

Definition

Oryza sativa Japonica Group Os08g0193600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5456487..5459221

Sequence Coding Region

5456487..5457186,5457982..5458009,5458077..5458133,5458552..5459221

Expression

GEO Profiles:Os08g0193600

Genome Context

<gbrowseImage1> name=NC_008401:5456487..5459221 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5456487..5459221 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtacgacccgctgccggacatcctccgcaagctccgcgatgcccagagcgccgccgctctctcaaaccctaaccctcccgagccccaaccccagccccagctcgcgacgccctccttccccaccaccaccgacaccgcctctcgccgtcgccggcgccgccgccgacgcggccgcggcaaccgtcacgacccgcagccggaggcggaggtggaggaggacacgacggaccgggcggagcttgagctgccgtacgacccgcttcccgacatcctccgcgagttccgcctcgcgccgcgcgccgccgctctcccgagccctaaccctaaccctaaccccgcgattccctcgtccaccacctctcgacgccgtcgccgccgtggccgtggccgcgggcgcgggcgcagggactgggcggcggggctgccgcgggaagcgatcctggccgtgctccgcaagctcgaccacatggagatcctgatgggggccgggcaggtgtgccgcgcctggcgccgcgccgcgcgcgacgatccccagctgtggcgccgcatcgacatgctcaaccacgccgaactctccttcgagctcaacctcttcgggatggcgcaggccgctgtgcgccgcagcgcggggcagtgcgaggccttctggggcgagtacgcgccgacgaagatttgctccatttcctcggagatcgctaccatcatatattcacaaatgacaggtttgtggggtgatgccgctatgatcataaggttcctgacaatagtttatgagaaaagggcaccatgtctgaagagtcttcgtctcatctcttgttttgatatccttgatgaaggattttcagcagcagtaaagaagtttccactacttgaggagcttgagcttacgctatgtgataatttaggtgagaatgatgtgtttaaggctgtcggcaaagcatgcccgcagctgaagcgcttcagattgagcaagaggtgcttctacaattataaacatagtgggtacaacaaggatgagcaagccctgggcattgcaactatgcatgagctaagttctctgcagctttttgctaataatctcagcaacgaaggattgacagcaatccttgacaactgccccttcctggaatccctcgacattcgccattgcttcaatgtcagtatggatgacaccctgcaagcaaagtgtgccaggatcaagacactgaggcttccctatgactcaactgatgactatgacttccaagttcataagcctatctggtcgggtgctgacttcttctctgatagtgatgatgattgcatttatggtggccccgactatattcttgactcagatgagtatgacgattactgtgacccttacatctaccttgatggcgtatatgaggacgagcttgatgaagaagatcggatgatgctcaaggctatgcacatgttcctgaaatga</cdnaseq>

Protein Sequence

<aaseq>MPYDPLPDILRKLRDAQSAAALSNPNPPEPQPQPQLATPSFPTT TDTASRRRRRRRRRGRGNRHDPQPEAEVEEDTTDRAELELPYDPLPDILREFRLAPRA AALPSPNPNPNPAIPSSTTSRRRRRRGRGRGRGRRDWAAGLPREAILAVLRKLDHMEI LMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFELNLFGMAQAAVRRSAGQCEAFW GEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTIVYEKRAPCLKSLRLISCFD ILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACPQLKRFRLSKRCFYNYKH SGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDD TLQAKCARIKTLRLPYDSTDDYDFQVHKPIWSGADFFSDSDDDCIYGGPDYILDSDEY DDYCDPYIYLDGVYEDELDEEDRMMLKAMHMFLK</aaseq>

Gene Sequence

<dnaseqindica>1..700#1496..1523#1591..1647#2066..2735#atgccgtacgacccgctgccggacatcctccgcaagctccgcgatgcccagagcgccgccgctctctcaaaccctaaccctcccgagccccaaccccagccccagctcgcgacgccctccttccccaccaccaccgacaccgcctctcgccgtcgccggcgccgccgccgacgcggccgcggcaaccgtcacgacccgcagccggaggcggaggtggaggaggacacgacggaccgggcggagcttgagctgccgtacgacccgcttcccgacatcctccgcgagttccgcctcgcgccgcgcgccgccgctctcccgagccctaaccctaaccctaaccccgcgattccctcgtccaccacctctcgacgccgtcgccgccgtggccgtggccgcgggcgcgggcgcagggactgggcggcggggctgccgcgggaagcgatcctggccgtgctccgcaagctcgaccacatggagatcctgatgggggccgggcaggtgtgccgcgcctggcgccgcgccgcgcgcgacgatccccagctgtggcgccgcatcgacatgctcaaccacgccgaactctccttcgagctcaacctcttcgggatggcgcaggccgctgtgcgccgcagcgcggggcagtgcgaggccttctggggcgagtacgcgccgacgaagatttgctccatttcctcggagatcggtgagttttgttctcccccaatcttcagaagaatctttttttttagtttgttctatataatcttgttcgacttcgttctctggtaagctgatcgcggcattgtgctttctgaattctggtttcttctagtcagctttgttctgatatgtgctgctcttgttcaaattgatggatgtaatagaatattgtaggactcttggttgactgtatcatctatgcttctaatcacggtttaattatgtgttctattcggtaccaactactaaatgcatcttaattagttgcagtgcatttgggtagatattgagatcacttgtgggtgatgaacatacaccaataacagaaattgcagtcaatgctatatctggtttgatattttcagtgcccctgatttttattttgtgttgcattgtcgaatgatcttttgtcagaattatgtcaatagccactgatttgagttcatatagattcatgtaagagtctgtttgattcctacactcatatctgttttggaagccatagcaggataactttgttatcttggcaatgaagtgtacaatagaaaagcttttgcattgatactttagtaataattgcctcacaagaaagcaagtgagcgtcaaatgctaataggtgactttggatttttgccatttgattctatgatttagaaaggataacttatcaagaacatgttggtacatcactaaaaatatccaattattggcagatatctgaaactgcctcaagtttcagtgtttttatgaactgaattcaccttgactttgcatttagctaccatcatatattcacaaatgacagggtaatatgcagcaccttgcaaagtccgtgtgtgtttaaaaggtcttaacaaactgtggtggtatcagtttgtggggtgatgccgctatgatcataaggttcctgacaatagtttatgagaaaaggtacatacttcagttggattcaaaatagaatatattcagaagagaacttttctattggagattacaaattattatctgacaaatgaaactcaacaaatgcagcagacttcatgcatgtttgatgctgctagcctgctattgcaacatttaattaataattcaaattctccagaccaaatatggcaattaagagaattccatttcacttgccttgtaaatgctataattgtgatgatgtgtgattattattctctaaagtgccagaatcttttacacatgatctgttaggaactgtgattgcagctaactacaaatttaccaagacttgaatgggggactagactgctagttacttcttgtactgttgtacaccatattccttttatcttttattgatgtccttgtcctatctttgcagggcaccatgtctgaagagtcttcgtctcatctcttgttttgatatccttgatgaaggattttcagcagcagtaaagaagtttccactacttgaggagcttgagcttacgctatgtgataatttaggtgagaatgatgtgtttaaggctgtcggcaaagcatgcccgcagctgaagcgcttcagattgagcaagaggtgcttctacaattataaacatagtgggtacaacaaggatgagcaagccctgggcattgcaactatgcatgagctaagttctctgcagctttttgctaataatctcagcaacgaaggattgacagcaatccttgacaactgccccttcctggaatccctcgacattcgccattgcttcaatgtcagtatggatgacaccctgcaagcaaagtgtgccaggatcaagacactgaggcttccctatgactcaactgatgactatgacttccaagttcataagcctatctggtcgggtgctgacttcttctctgatagtgatgatgattgcatttatggtggccccgactatattcttgactcagatgagtatgacgattactgtgacccttacatctaccttgatggcgtatatgaggacgagcttgatgaagaagatcggatgatgctcaaggctatgcacatgttcctgaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0193600, RefSeq:Os08g0193600