Os08g0199300

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Gene Name

Os08g0199300

Description

Similar to YyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS (Fragment)

Version

NM_001067741.1 GI:115475218 GeneID:4344894

Length

5092 bp

Definition

Oryza sativa Japonica Group Os08g0199300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5745741..5750832

Sequence Coding Region

5745847..5745933,5746838..5747005,5747088..5747211,5747425..5747516,5747601..5747699
,5747823..5747936,5748537..5748601,5748689..5748803,5749215..5749292
,5749849..5749941,5750291..5750341,5750431..5750529

Expression

GEO Profiles:Os08g0199300

Genome Context

<gbrowseImage1> name=NC_008401:5745741..5750832 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5745741..5750832 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcccaaggcgtccaagaaggacgccgcccccgccgagcgccccatcctcggccgcttctcctcccacctcaagatcgggatcgttgggttaccaaatgttggcaaatccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctgtaccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttgtcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgggcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacgcgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaataccttccagctacttacagctaagccagttgtctatttggtgaacatgagtgagaaggactaccagaggaaaaagaacaagttcctacctaagatacatgcctgggttcaggaacatggtggtgaaactattattccttttagctgtgcttttgaaaggttgctagcggatatgcccccggatgaagctgctaaatattgtgctgaaaaccagattgcaagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatactttttcactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctcaagctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaagttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacaggcaggaagggaagacctacgtggtacaggacggggatatcatcttctttaaatttaacgtgtctggaggtggaaagaagtga</cdnaseq>

Protein Sequence

<aaseq>MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIV TKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGA HAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIE FVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQ LLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPD EAAKYCAENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIH TDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGG KK</aaseq>

Gene Sequence

<dnaseqindica>107..193#1098..1265#1348..1471#1685..1776#1861..1959#2083..2196#2797..2861#2949..3063#3475..3552#4109..4201#4551..4601#4691..4789#ccttcttcttccctcacccccttttcccaccaaaaaccctagcctccccctcctcttccagattcatcgccgccgcgccgccccgagcccagagtagccggcgacgatgccgcccaaggcgtccaagaaggacgccgcccccgccgagcgccccatcctcggccgcttctcctcccacctcaagatcgggatcgtacgcgccccttaattccccaccgctatatctctactctcctttgcttcgccgtcgacgcgacgaccgcgggtgcctgcccgggggccagtggatctcgcggctttgctgtcatgcgatgtggatagtagattgattgtagtttgtgcaggattcgcgtgtgcagcagctactacggtggatacatcggagcttagtgcttggggttgggggagatatgtgctttggttttcggggtagtagaacggagcgtgcgcccagctcgaggccgtgattttagtagggttttgtccccttggtggtcagtgtggggtttggttggtgcttaggtttttgattcatgttccgctgctttgtgcttatgtggatgtgatttgaatctaactttagtgggtaacccggtgttcttaatttggcgaagcattctatataagaacgatctacgccatatctttatgcatgaatgtttagacgatctcctgttacctttgtgtacttttttcctgctggaagcatgatagcccatggtagatacctgtacattcctattcattagttcttcccaattgatcgcctttggtggtgctaatagtgatagtatgatattgtcatattgctcaacacacctgctactgatgaatgattatgtataagcatttgcttttaacttgtataccatcacgggttcataatgcaatatttgttattggatttgttcattgtttcatcaatatttggatcagcaaatgatttgatcattagttattctgtgcagagatgcttttccaactttacagcgaagcatataattaccaataatcccatttttacccttttgatttatcctagttttctcatcagttataaagacttatgaatttctttgtatttattttctctgcaggttgggttaccaaatgttggcaaatccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctgtaccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttgtcaactttacaagccaaagagtgaggtttgtttctttcctacactataatgtgcaacttcttttcttatgtttcaagacatatcatgtcttctgaatttctttgcaggtgtctgcatatctagaaatcaatgacatagccgggcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacgcgctgttgatggaatttttcatgtattgagtatgttcctgttacttatcattttgattggatcttgcatattgagtgtgtagtcatggacttgtgctattgtttcagtgtgaagcaaagtaaacgttgtgattgttctagtgaaagcattggtgctcagattcgaatcaattttctttgcttttttgtttaaccagtaatcacaaggtcatgcacttcatgaatgctgcttatgtttatcaggagcatttgaagacaaagaagttactcatattgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaaggtttttatagggatgcttgatttgcacgtcagtaaatgctttggttaaaccttcttttaaatcctatcgcactttcttttgcaggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataagcagctgaaactcgagcatgaattatgtgagaaggtggggcacctgttacagccaacctctgtgttgctaaatttgtctgttagcagccttgcataatttcaaattgttattttcttgagtgagtggaagcttacttttggcttctcttcctaacaggtcaaagcccatcttgaagatggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaataccttccagctacttacagctaagccagttgtctatttggtacgtatttttgtcatctgtatgccagtttatttgagatgttataaagtagttttcatgatgaggtgttcagttgttctttgtgagatttcagttttgttattttcgtgcttctgcatttagagactcagtaataatgtcagtacgttgattcatggctatacatgcttttgaatttatacaatagtgcccatgaatagcgcatattgttttctattagcaagataaacttggaatagtgcaaaacttatcctgtggactttctgttgtgccctgtttgtctgtttcagtcttcctcctattatgtaatgtttattttgaggcatcaagcaatattctgaagcagtgaataatactttcttgttttatgtatgggaactctacctatatatcattttcagagcacacaatcaactataacccaaatagtcactaatcgtgtaattagctgtatacccacctaacctaacatggatattttagttgacctgtcagaaattgaaagggagatgctagtatgttacctttccttgcatatggtaatttttttttaataaaagtagagctatatattgtttaatgactgttttgtttttgcaggtgaacatgagtgagaaggactaccagaggaaaaagaacaagttcctacctaagatacatgcctggtattgttctctagtatatagtaactatttcttgaagggattaaggtgtaatggaaaataaggcaaactgttgttttttattttcagggttcaggaacatggtggtgaaactattattccttttagctgtgcttttgaaaggttgctagcggatatgcccccggatgaagctgctaaatattgtgctgaaaaccagattgcaaggcaagccatgtcacactcatataccattaaatgttctttatgtgtttagcttagttccaaaaaaaccaaaggtaaattgcttgatttggaatcaagcaaatcaagcaatactgtcacactcatatatgagtccttttacttggattttatttcctgagtgacgcaatagtgatgcctattttttggttgggtcactacgtgtctttgaggtgaattccatttggtcatactttctataagatacattatatgactatgattctataaacaccaatagaactatcaaaccagcaagagtctttttagttgcatgttgtttaccatatattgtagcttcttttttatatgattcaaaatttctgatctgtcattagttgcttgtccttaagcattctctattttttgctgcagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatactttttcactgctggccctgacgaggtatattttttctggtcatattatgcttatcttacactattacttgttgattttaatataatccatcttttacttcccatgttgctatatgacagtagcattgccctttaacaattgtgttgtgcaatttgctgcactttgttttaagtaatacgcagtactccctcctacaaaagttatacatattacttttaccaccatgaccaaggagaaattaaactcatcttgcatgtaacaaagataaggagtgtatgcacgcatgcaaccaatgagtattaagatggctcctcgggttttgatcaaacatttaatttacctatccatttaaatcttggatgcatacacactacaaataggaacaacttatttgggaaaactaaaatatgaaataggtctaattcttgtggatggagtactttctttagttcttattttttatgttcttaatagttcaaatgcaagcgatgtgaaaattttagttttatacattcttgtttaaatatatgtttgaaatacattttgctggattagtgacatagatggattttctgttcaggtaaagtgttggcagatcagacgtcaaactaaagcacctcaagctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtactcatgcgatatactcaggcttcatatgagtagttagtatatgcatgctaatgtggttagatattattgcaaacaattgatctcatgtcactgttaagtagctggtctaattcactagttatactacctcattttgtacagttatccccaactccgcagtactcaatggacacattgatttagatgttttctgatgcgacttttctagtttgatatagttcttttatttgtaataattattctctttgttttatatatttggttgggcttgtctgtccagtagcattgttctttttagctttatgcacatttgaaacttatgtgaaatacatttttctgggattaggtaatgaagttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggtatgcaaggcacctaacaaagttgatattgttcaagtgcctcttttcgatatatacttaatgaaaacgcccattattgcgaattgtaggctgctggaaaatacaggcaggaagggaagacctacgtggtacaggacggggatatcatcttctttaaatttaacgtgtctggaggtggaaagaagtgagtcaatgtttgaaggtgatagcgttccgacagagtggtgcattttactttaaacttctacacttagctctgtagcaataaacaagttatgattcgatattttgtaccatgaggctataaaattatccaaggattgtatgatgaggctttaaatcattgaagaaaaagtgtacggttttgcaatacaagcattcttggcatgtttgtcttgcctgggtctacatctgtaatattaatggataactgccgtgcatgtttggacaactcgctgtcatgcagtcaaatgtggttctttccccacggt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0199300, RefSeq:Os08g0199300