Os08g0203400

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0203400| Description = Protein kinase-like domain containing protein| Version = NM_001067758.1 GI:115475252 GeneID:4344914| Length = 7481 b...")
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Gene Name

Os08g0203400

Description

Protein kinase-like domain containing protein

Version

NM_001067758.1 GI:115475252 GeneID:4344914

Length

7481 bp

Definition

Oryza sativa Japonica Group Os08g0203400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6014748..6022228

Sequence Coding Region

6014821..6014929,6015062..6015251,6016759..6016830,6016991..6017062,6017153..6017224
,6017630..6017701,6017826..6017897,6017981..6018052,6018311..6018382
,6018459..6018530,6018622..6018696,6018800..6018871,6018966..6019031
,6019099..6019164,6019239..6019283,6019370..6019434,6019526..6019905
,6019989..6020187,6020257..6020415,6020503..6020621,6020750..6020960
,6021089..6021320,6021400..6021550,6021653..6022012

Expression

GEO Profiles:Os08g0203400

Genome Context

<gbrowseImage1> name=NC_008401:6014748..6022228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6014748..6022228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggtgttagtggtaagctggtgtgggtgttgctcgtgatgtgctcctcatggctgatcgccgctgttcatgcccagcaagcggcaacaactgatccaatcgaagtggcggcgctggaggcgatcctggggagatggggcaagacgacgtcgccgctgtggaggatgagcggcgagccatgccgcggcgtccccgtcgacggcagcaccgacctcgacggcaaccccaagaacaaccccggcatcaagtgcgactgttcctacaacagcggcaccgtctgccatattacccagctgagggtatacgcattgaacgttgtcggtcagatacctgcagaattgcagaacctcacctacctaacttacttgaacctggatcaaaattacttgtcaggccccataccatcattcattgggcaattgactgccttgacagaattgcacgtgggattcaatccactctcaggatcacttccaaaggaacttggaaatctcacgaacctcaatttgctaggcattagtttgaccaatttttctggtcaacttcctgaagaattgggcaacttgaccaaacttcgacaattgtatactgatagtgctgggttgagtggcccattcccttctacgctctcaaggcttaagaacctaaaactcctgcgggcatcagataacaattttactggaacaatacctgattttattgggagcttgtctaatttggaagatctggctttccaaggtaattcttttgaaggaccgatcccagcaagtttgtctaatctaaccaaattgacaaccttgcggattggtgatattgtaaatgggagctcttcattggcctttatcagcagtctgacatctctggataccctcgtactgaggaactgcaagatatctggagaccttggagcagtagatttttcgaagttcgcaaacttaactttcctggacttgagttttaacaatatctcagggaatgttcctaaatcaattctgaatctacaaaagcttatattcctgtttcttggcaacaacagcctaacaggagaattgccagatgggataagcccttcgctaacgaacttagatttctcatacaaccagctcactggtagctttccctcctgggttacccagaacaatctgcaattgaatttggtggcaaacaactttattcttggcagcaccaacattggcatgctacctccagggctaaactgcctccaggaagatactccatgttttcgtggttctccaaaatattattcctttgcggtagactgtggtagtaatagatctatcagagtttcggataatactatgtacgaattggattccacaaaccttggggactcatcatattatgttacaagtcaaacaagatggggcgttagtaatgtaggaaaattattccaggccccaaatgacagtaagataatacatagtggtgagaagatccagaatgcagtggattcagaactattccaaactgcaaggatgtcgccgtcgtctctgagatactatggccttggacttgagaatggaaattacaccgttctgcttaaatttgcagagttaggttttccagacacgccaacttggcaaagcttaggaaggagattttttgacatatatatccagggtgaactaaaagaaaaggacttcaatataagaaagatggctggtggaaaatctttcactgctgtttacaagagttacacaacaactgtgtcaaaaaactttcttgaaatccatctattctgggctggaaagggcacttgttgtattcctattcaaggttactacggaccattgatctcagcattaagcatcactccaaattttagtcctactgtgcgaaacggtgtacccaaaaagaaaagtaaagcaggtgcaattgttgggattgtgattgctgcctcggttttaggatcagctatcttattcggaatatttatggtcataaagaagagaagaagaatggcaaaacagcaagaagaattatacaacctagttggacagcctgatgtcttcagtaatgctgaactcaagttagctacagacaatttcagttctcaaaacattcttggggaaggtggatatggtccagtctataagggtgtgctacctgatggaagagttatagctgtaaaacaactttcccaatcatcccatcagggcaaaagtcagtttgtgacagaggttgcaactatttctgctgtgcaacatcggaatcttgtaaaattgcatggttgctgcattgatagtaacacacctttattagtttatgagtatcttaagaatggaagcttggataaagcattatttggaaacggtagcataaaactggactgggcaacacgcttcgagatcattttaggaattgcaagaggcctaacttatcttcatgaggagtcgagcgtgcgcattgttcatagggacatcaaagctagcaatgtcctacttgacacagacctcaccccaaagatctctgactttggactcgccaagctttatgatgagaagaagactcatgttagtacaggaattgcgggcacatttggttatctggctcctgagtatgcgatgagacgacatttgactgaaaaggttgatgttttcgcattcggggtggtagcactagagattgttgctggtcggtcgaacaccgacaattctcttgaggaaagtaagatctatctctttgagtgggcttggagcttgtatgaaaaggagcaagcactcgggattgttgacccaagacttgaggaattcagcagggatgaagtgtatagagtcatccatgtcgcactcatctgcacacagggctcaccctatcagcgaccaccaatgtcaaaggttgtggcaatgctaactggagatgttgaggtggcagaggtagtgacgaagccgaactacatcaccgagtggcagttcaggggtgggaataccagctatgttaccagccactcaggatcaactacccctaagctcagcaggcagaaagagattgatcctctcactcaatcaccaacaatcaccggagttagccatgagcatgagggaaggtga</cdnaseq>

Protein Sequence

<aaseq>MGGVSGKLVWVLLVMCSSWLIAAVHAQQAATTDPIEVAALEAIL GRWGKTTSPLWRMSGEPCRGVPVDGSTDLDGNPKNNPGIKCDCSYNSGTVCHITQLRV YALNVVGQIPAELQNLTYLTYLNLDQNYLSGPIPSFIGQLTALTELHVGFNPLSGSLP KELGNLTNLNLLGISLTNFSGQLPEELGNLTKLRQLYTDSAGLSGPFPSTLSRLKNLK LLRASDNNFTGTIPDFIGSLSNLEDLAFQGNSFEGPIPASLSNLTKLTTLRIGDIVNG SSSLAFISSLTSLDTLVLRNCKISGDLGAVDFSKFANLTFLDLSFNNISGNVPKSILN LQKLIFLFLGNNSLTGELPDGISPSLTNLDFSYNQLTGSFPSWVTQNNLQLNLVANNF ILGSTNIGMLPPGLNCLQEDTPCFRGSPKYYSFAVDCGSNRSIRVSDNTMYELDSTNL GDSSYYVTSQTRWGVSNVGKLFQAPNDSKIIHSGEKIQNAVDSELFQTARMSPSSLRY YGLGLENGNYTVLLKFAELGFPDTPTWQSLGRRFFDIYIQGELKEKDFNIRKMAGGKS FTAVYKSYTTTVSKNFLEIHLFWAGKGTCCIPIQGYYGPLISALSITPNFSPTVRNGV PKKKSKAGAIVGIVIAASVLGSAILFGIFMVIKKRRRMAKQQEELYNLVGQPDVFSNA ELKLATDNFSSQNILGEGGYGPVYKGVLPDGRVIAVKQLSQSSHQGKSQFVTEVATIS AVQHRNLVKLHGCCIDSNTPLLVYEYLKNGSLDKALFGNGSIKLDWATRFEIILGIAR GLTYLHEESSVRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKKTHVSTGIAGTFG YLAPEYAMRRHLTEKVDVFAFGVVALEIVAGRSNTDNSLEESKIYLFEWAWSLYEKEQ ALGIVDPRLEEFSRDEVYRVIHVALICTQGSPYQRPPMSKVVAMLTGDVEVAEVVTKP NYITEWQFRGGNTSYVTSHSGSTTPKLSRQKEIDPLTQSPTITGVSHEHEGR</aaseq>

Gene Sequence

<dnaseqindica>74..182#315..504#2012..2083#2244..2315#2406..2477#2883..2954#3079..3150#3234..3305#3564..3635#3712..3783#3875..3949#4053..4124#4219..4284#4352..4417#4492..4536#4623..4687#4779..5158#5242..5440#5510..5668#5756..5874#6003..6213#6342..6573#6653..6803#6906..7265#gcatcgtacaaacacaccatctatatatttaacaagcttccgtgttgtttcggcagcagaaagagagagagagatgggtggtgttagtggtaagctggtgtgggtgttgctcgtgatgtgctcctcatggctgatcgccgctgttcatgcccagcaagcggcaacaactgatccaatcgaaggtataatcaaagcacgtaatcaaatcatgctgctatatatatatatatacacgtaattagtcttgatatcaatgcaatgcgaagcttaattattgtacttattattactctggtactatacattcggtgcagtggcggcgctggaggcgatcctggggagatggggcaagacgacgtcgccgctgtggaggatgagcggcgagccatgccgcggcgtccccgtcgacggcagcaccgacctcgacggcaaccccaagaacaaccccggcatcaagtgcgactgttcctacaacagcggcaccgtctgccatattacccagctgtacgtatacgctcccatcctgcttccttggctctgttcatctgcacgcacaccaggtgctcgacgcagtgcctacgggaacaggaggccattggcgtctggatatataagttctaatggaaacttaacttgaaattgcaacttttgatcctcgcaaaaaaaaagaaaaagaaaagaaattgcaacttttgcaagaccacaccattgagcatatgcataggaccacaggtttcagtttcactacttaggaatagaggagcctcatttatgtcccccgaaattctgttgtgggtccgaatttcatttaggagtaaagcatgatgacttgtattttatttttactcctccaatcgggaaaccaggttatttcaacaccccaccccgcctcatggccagaaaaatctgatctctttggcagggtttaccattttattttaaattgaaaaccgatcatcacaagctgaaacccggcaaaaacggatgacttttggtcaacgccatacgaaaaccagctaaaaccgtttggcttccacaaatgactgaccacgggcagtttaaaaaaaccgatcggtttttgttaatactgctctttggtcactggtccaagtactggaatctgaggttcagcttcctgcaagatctttagttcttaaccttccacagctgccatctgccttccattatagttggatctggctgggatccggttgagtaagtccaggcagccctggagagatcaaactaatcaatcgtcaattttgtaattctacgcatggtgcgcaaccatagtagaaattagacccaactcccaagcagattttctgtgaccaaacaatattgttgggatgtgtgtgtgtatttttcccatttttctgtgggggaccagggctgtctatgtgtgcctggtcaagagttagctcatatattggactaaatagtaaaaagtatatatgatctaatggtgtagattgatttaattttttatttaattagattgcaatataaagtttgaaagggtaattttgtcttttcttggttattctataatcaaatcgtgctatcgtcacgtgctttgtcatcaaatggcgctcaggatgctcctcccctagtgcacgataagatccaggaccgggtactctcaattagattcaatttaaaccaaaaattactaaagtgttgttttattttctatcaaattcctaatatgcccttttatatactgccagtatatactggtagtatattgtaccgtaaaagttctctagaaattagctcttatcacagccattaaggagacaggtaaaaggacttgttgatttgccttggggagatgaggcatgggcatgatgataattaaaccaagggttattatgggtagttcaatggtaaaataagtactaaattgctactatattagaataaaatttgaaatctagatgctatattttgggatgaatggagtatttttctcatgtgaataattttctttttttgtttatttattcaggagggtatacgcattgaacgttgtcggtcagatacctgcagaattgcagaacctcacctacctaacttacttgtatggtatctagcttttctcggctctgccttgatgatgaactactgttggatatatactacatattcttaatatcttgcagcaagacatcaattcaaagtgaacctcatgtttgaaattcatcgctgctaattgacttgatgtttcttgttcttttcaggaacctggatcaaaattacttgtcaggccccataccatcattcattgggcaattgactgccttgacagaattgtaagagttgtactttaagttttcctgcattgtccttattagttagtgttttgtttgaatcatccttcttccttttgtaataaaaaaaaggcacgtgggattcaatccactctcaggatcacttccaaaggaacttggaaatctcacgaacctcaatttgctgtaagtgttcccttcttgcacagattaataatggtctaaagtatttcattatatggaaaaatctagatgcataagttctttctacaaatttctagaaaatcacaaataaaatttaagcaccagtgtaattttacttttcaaatggtgtcttataaatttgtgtgaaatccaaaatgtgaatattgtggatcaaaaggctcgtcagcacatacaatgctacttttctcaactagtagcattgcatgcacggaaattatatcactcttgagcttttttttttttcagaggcattagtctgaccaattttacgggtgaactccctgaagaattgggcaacttgagcaaacttaaatatttgtaagtttctaaattatatcactcctgaaatatttcattttgtttcagaggcattagtttgaccaatttttctggtcaacttcctgaagaattgggcaacttgaccaaacttcgacaattgtaagtttgtaatccccctctttctaacttgaaagatgctacttctagaagaacaaagtttaatttggaccagcaagatacttacagttaaacatcaatgatttctgcattgttttaataacaggtatactgatagtgctgggttgagtggcccattcccttctacgctctcaaggcttaagaacctaaaactcctgtaagttcaagaaacagaaccacagtggtcatgttcattttgtttttatatgctcaacactaaacatgtttttatgcttgtaggcgggcatcagataacaattttactggaacaatacctgattttattgggagcttgtctaatttggaagatctgtaagatttattattagctttttaacacatcattgattttatccttaccacaagacaagtggaattgcaacagaaattttctgcaaatgttctatctattttaattcaaactgtagcatttttttttctgtttggtcatcacttttaagaaatgcgcatacctcaacagtgtcttgatatgtagatgttactttttcctatattctaatggaccttaaatctcccaacttttgtctttcttaaattatgaactcacagggctttccaaggtaattcttttgaaggaccgatcccagcaagtttgtctaatctaaccaaattgacaaccttgtaagtacttcgttcagtggcaacattgtcatcccctcttgtcacgataactggtgtactaaacacaaatgagcaggcggattggtgatattgtaaatgggagctcttcattggcctttatcagcagtctgacatctctggataccctgtatgtgacacttttaaattctaactatacatcttacaattttatatattgacaaagatataagttgttaataccaaatatttttttacagcgtactgaggaactgcaagatatctggagaccttggagcagtagatttttcgaagttcgcaaacttaactttcctgtacgtttttcattatgggtcatagcacagtccatgaaacttttggtaatttttcttaaatttcatgtaagtgtctgttcaagtatgctgtcttctggcgcagggacttgagttttaacaatatctcagggaatgttcctaaatcaattctgaatctacaaaagcttatattcctgtaaggaattctttctgggggttattactatctactgaaacacatgttataattgatgaccacgtttcatcatcttgtcttctttccaactcaggtttcttggcaacaacagcctaacaggagaattgccagatgggataagcccttcgctaacgaacttgtgagtaaacaattcatccctgtaatacagctaaaattagaatgatgcatttatttcatgtttgcagagatttctcatacaaccagctcactggtagctttccctcctgggttacccagaacaatctgcaattgtaagaagaaagttctcaaatttgtgtttccaagggaaaaaatatgttatactcaaccttttattttttacaaggaatttggtggcaaacaactttattcttggcagcaccaacattgggtacttatggcatttatttgtacattcataagtttttactaatttctctctcaccacttttaatttcgagtcaactatctccacagcatgctacctccagggctaaactgcctccaggaagatactccatgttttcgtggttctccaaaatgtatatgtctcacttttcctcaaccatagcagctgatatattgggtcttgaaattctaatactattataattttgcacgtcatgactgcagattattcctttgcggtagactgtggtagtaatagatctatcagagtttcggataatactatgtacgaattggattccacaaaccttggggactcatcatattatgttacaagtcaaacaagatggggcgttagtaatgtaggaaaattattccaggccccaaatgacagtaagataatacatagtggtgagaagatccagaatgcagtggattcagaactattccaaactgcaaggatgtcgccgtcgtctctgagatactatggccttggacttgagaatggaaattacaccgttctgcttaaatttgcagagttaggttttccagacacgccaacttggcaaagcttaggaaggagattttttgacatatatatccaggtataaattgagtccattatatagtaatttgtttactgaatctttttcttatttatatcaatgtattattgacatttctacagggtgaactaaaagaaaaggacttcaatataagaaagatggctggtggaaaatctttcactgctgtttacaagagttacacaacaactgtgtcaaaaaactttcttgaaatccatctattctgggctggaaagggcacttgttgtattcctattcaaggttactacggaccattgatctcagcattaagcatcactccaagtaagcgtaataattaagttaacataaaaatgattgcattggattccaataaatgaaatcctctttcagattttagtcctactgtgcgaaacggtgtacccaaaaagaaaagtaaagcaggtgcaattgttgggattgtgattgctgcctcggttttaggatcagctatcttattcggaatatttatggtcataaagaagagaagaagaatggcaaaacagcaagaaggtaatagtttttaataatacaataattcagacatcaaaattttaatacgatttattgtttctggtgtgccctgaaaaataaatgtagaattatacaacctagttggacagcctgatgtcttcagtaatgctgaactcaagttagctacagacaatttcagttctcaaaacattcttggggaaggtggatatggtccagtctataaggttgtctatttccactaatttagtactatgcaatttcaattgatttgtttttaaatttaactttattgcaaacttgttggtctatgcttcgaaatatacatataactttagcaatgttcttctggtagggtgtgctacctgatggaagagttatagctgtaaaacaactttcccaatcatcccatcagggcaaaagtcagtttgtgacagaggttgcaactatttctgctgtgcaacatcggaatcttgtaaaattgcatggttgctgcattgatagtaacacacctttattagtttatgagtatcttaagaatggaagcttggataaagcattatttggtgagttcacttttgctcaaaaccaacacctacaaaattgtatttttcttcacatgctctttgggagaactcatctcttcattttgccatcatttagttcacagagccttaaagttatttttttacaggaaacggtagcataaaactggactgggcaacacgcttcgagatcattttaggaattgcaagaggcctaacttatcttcatgaggagtcgagcgtgcgcattgttcatagggacatcaaagctagcaatgtcctacttgacacagacctcaccccaaagatctctgactttggactcgccaagctttatgatgagaagaagactcatgttagtacaggaattgcgggcacattgtaagaacatttcaccatttctcttatatttgtaccttacaaacaaagctaacttaaacttatctaaccttttgtcaagtggttatctggctcctgagtatgcgatgagacgacatttgactgaaaaggttgatgttttcgcattcggggtggtagcactagagattgttgctggtcggtcgaacaccgacaattctcttgaggaaagtaagatctatctctttgagtgggtaagctgatttaacgatctttcaatataatccaagatcatattagttcattcattcatattatcttctagttactaaagatttgcctatgttaatttacaggcttggagcttgtatgaaaaggagcaagcactcgggattgttgacccaagacttgaggaattcagcagggatgaagtgtatagagtcatccatgtcgcactcatctgcacacagggctcaccctatcagcgaccaccaatgtcaaaggttgtggcaatgctaactggagatgttgaggtggcagaggtagtgacgaagccgaactacatcaccgagtggcagttcaggggtgggaataccagctatgttaccagccactcaggatcaactacccctaagctcagcaggcagaaagagattgatcctctcactcaatcaccaacaatcaccggagttagccatgagcatgagggaaggtgaatgcaaagttgaatagatgcaggtgatcttggtttgaagtgacaatactatatgctattcgtgcttatgtgactatatgtaaatgtgaatcagagcaaatagcggaacttatttattctgaagtctgaactatgtgtcatgatgataaaagtattgctccttgtaatttgtaatggtgaaatatagtgctatatactaggatgtttggagttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0203400, RefSeq:Os08g0203400