Os08g0206600

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Revision as of 12:51, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0206600| Description = AICARFT/IMPCHase bienzyme family protein| Version = NM_001067775.1 GI:115475286 GeneID:4344931| Length = 5348 bp| D...")
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Gene Name

Os08g0206600

Description

AICARFT/IMPCHase bienzyme family protein

Version

NM_001067775.1 GI:115475286 GeneID:4344931

Length

5348 bp

Definition

Oryza sativa Japonica Group Os08g0206600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6217695..6223042

Sequence Coding Region

6217756..6217863,6218008..6218122,6219378..6219453,6219845..6219941,6220107..6220209
,6220320..6220450,6220632..6220809,6220905..6221062,6221292..6221501
,6221578..6221925,6222007..6222133,6222651..6222802

Expression

GEO Profiles:Os08g0206600

Genome Context

<gbrowseImage1> name=NC_008401:6217695..6223042 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6217695..6223042 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccactcaacctcgcctcctctcccgccgccgccgccgccgccaaggtctgcgccggcgtgcgcgcgtccccgcgccacctcctcccccgcgctcttgaccaccagagccgccgcgtcctcagcttgtcgtcctcgtcgtcggcggggcgtgcggcgggtgtgcgggccatggccgcggcggaggccggtgcgtcgacggcgacacaggctaagtcgagcggagtcaaacaagcactgatatcattgtcggataaaacagacttggcctatcttgggaatggccttcaagccttggggttttctattatttcgactggtggcacagcatcaagcctggaagcagctggagttaatgttacaaaagttgaacaaattacaaattttcctgaaatgcttgatggtagagttaaaacattgcaccccagtgtacatggtggtattcttgcaagaagagaccaggagcatcatcttaaggcattgaatgagcatggcattgggacatttgatgtggttgtggtgaacttgtatccattctataacaaggtcacctctggtgtaatttctttcgaggatggcattgaaaacattgatatcggtggacctacgatgatccgagcagcagctaagaatcataaggatgttcttgttatggtggatcatgaagattaccctgctctattagagtatctgcaaggaaaacaagatgaccagcaattccgcaagatgctagcatggaaagctttccaacatgtcgcttcttatgattcagctgtctcagaatggttgtggaagcaatcgaacaaaggagatgtattccccccgaacttcaccgtgcccctgtccctgaaatctacacttcgttatggtgaaaatcctcatcaaaaagctgccttctatggggacaagagtctttctgtagttaatgctggtggtattgcaacagcaattcagcaccatgggaaggaaatgtcttacaacaactacttagatgcggatgctgcatggaactgtgtatcagagtttgagagtcctacgtgtgttgtggttaagcacacaaatccatgtggagtagcatcccgacaggatattcttgaagcatacaggttggctgtaaagggagatcctgttagtgcatttggtgggatagttgctttcaatacgacaattgatgaggatcttgcaaaagaaatccgtgaattcaggagccctacagatggacagacgcgaatgttctacgagattgttgttgcacccggctatacagaaaagggtcttgagatcctcaaagggaaatcaaagacattgaggatactggaggcgaagagaagtggaaaagggatgctatcactcaggcaagtcagtggtggctggttggctcaagagtctgatgatctaacccctgaagatatcaccttcacaacagtgtccgagagagctcctcaagacagtgagctctctgatgccaaatttgcctggctttgtgtaaagcacgtaaagagtaacgccattgtgatagccaagaataactgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttcaggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattcgcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccgagcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctcctcttcaccggcgtcaggcacttcaggcactga</cdnaseq>

Protein Sequence

<aaseq>MPLNLASSPAAAAAAKVCAGVRASPRHLLPRALDHQSRRVLSLS SSSSAGRAAGVRAMAAAEAGASTATQAKSSGVKQALISLSDKTDLAYLGNGLQALGFS IISTGGTASSLEAAGVNVTKVEQITNFPEMLDGRVKTLHPSVHGGILARRDQEHHLKA LNEHGIGTFDVVVVNLYPFYNKVTSGVISFEDGIENIDIGGPTMIRAAAKNHKDVLVM VDHEDYPALLEYLQGKQDDQQFRKMLAWKAFQHVASYDSAVSEWLWKQSNKGDVFPPN FTVPLSLKSTLRYGENPHQKAAFYGDKSLSVVNAGGIATAIQHHGKEMSYNNYLDADA AWNCVSEFESPTCVVVKHTNPCGVASRQDILEAYRLAVKGDPVSAFGGIVAFNTTIDE DLAKEIREFRSPTDGQTRMFYEIVVAPGYTEKGLEILKGKSKTLRILEAKRSGKGMLS LRQVSGGWLAQESDDLTPEDITFTTVSERAPQDSELSDAKFAWLCVKHVKSNAIVIAK NNCMLGMGSGQPNRLESLRIAFRKAGEEAKGAALASDAFFPFAWNDAVEEACQNGIGV IAEPSGSMRDGDAVDCCNKYGVSLLFTGVRHFRH</aaseq>

Gene Sequence

<dnaseqindica>62..169#314..428#1684..1759#2151..2247#2413..2515#2626..2756#2938..3115#3211..3368#3598..3807#3884..4231#4313..4439#4957..5108#gagagagatacgcgacaaaacaaatccgcccccgagaaaaggaggccacgaaattacgagaatgccactcaacctcgcctcctctcccgccgccgccgccgccgccaaggtctgcgccggcgtgcgcgcgtccccgcgccacctcctcccccgcgctcttgaccaccaggttctccctcctttcctcctcctcccccagctcgtcctggctctggagctgctgctgcttttttctctcttctccttttgctcgttgcttccgcaagctcagtggctggtctggtttggtattttacccctttcttgtgtgcagagccgccgcgtcctcagcttgtcgtcctcgtcgtcggcggggcgtgcggcgggtgtgcgggccatggccgcggcggaggccggtgcgtcgacggcgacacaggctaagtcgagcggtgggtgtatacgcctctgcttgttctcttttcttggtttggttttcgggccaaagtgcaaattattgatttcttttttcatgaaatgctggaggttatgcaagggtgtccgataatattttccatgccataagattgattgatttgtgtgtgtgtgtgtgattagagtgaatttttactttgctggttgtagtgcaatgtacggatggatagatgcacattggctagtattgggggatttgttcgaccaggagctatgtgttttaaatcacttaaaccccaacaaaaccctaacgcggaaagaataagttgcatttttgttgcaaaactgcactgacagaaaagctgtagtgtccaattgttgcaaggatatactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacacatatagttttacatatttcacaaatttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtataatttttttaaggggggcaaatatgtgtgttctaaatgcttaaatgcatgcagcatgcttaacaacagttagttggctttggtgtttcaatgcctatattcttgtataataccattcgatataaaattcatacgtgtgaattttaaaatttagcactttgcacgccatattctagttgatgactatgttccgttgagatccttttgtactggtttattttagttccatccagaaatccatgtagatatgtttgatttgttgcgctgtttatattggttgaatgttttgaacagataaatttggtgccgttgttttttctattcccattattttctatgttctctcaaagagtagattcatgcagcatgctcaaagatgtatttcaatgtgtgagctaataacaagttcctatatcgaacagtgaacttatcatttgctgtttggcaaagttaggctttattctctgtaataagcttcttattatagtttattttgaaccatgattagatttattttgaacaaatcaattttggccctgtactcctgttgatttctatacgcccattgatttttgtgttttctcattcttgacataaagatatatttcaatgtgtgagctaataataagttcctaacacagcaggagtcaaacaagcactgatatcattgtcggataaaacagacttggcctatcttgggaatggccttcaagccttggggtaaacctttcatcttgtgggatgctccccttttcggttttatatttaacagttgtggttttgctgtcaagttcactttagaatatttgaattttgtgctttaaagcttctctcatcatcaccatggaactatttgttgtatatcaaattcctatatcaagcagtagaccagtagtaaattatcatatttgcccttttgtaaagttaggctttattcgccataataagcttcttgcagtttatcttccccagctgcataattttaaggctgacaatttggatcaggataacgaaacatgattttataaaggatgaaccatgattagatttctactgttgattctttttcaatctagtatatgatcatcttatggacattttgctactgtaggttttctattatttcgactggtggcacagcatcaagcctggaagcagctggagttaatgttacaaaagttgaacaaattacaaattttcctgaaatggtataacctaatttttattttactcctacatttcttgaaatatatgttgcttcctagcatcgtttatcattgttggttactcagttttgtcccttaattagatatgtttgcactgactgcaaataaatttcattttatccaatggttcacatttggtaaattcagcttgatggtagagttaaaacattgcaccccagtgtacatggtggtattcttgcaagaagagaccaggagcatcatcttaaggcattgaatgagcatggcattggtgagattgttagttcatttgtgttactgacttatcttctctcgaacattgtaaagagttaatgtgatgaagtattgtcagttaactaggaccttttcctttgggcacagggacatttgatgtggttgtggtgaacttgtatccattctataacaaggtcacctctggtgtaatttctttcgaggatggcattgaaaacattgatatcggtggacctacgatgatccgagcagcagctaaggtgatttattggttcttgagactttttagttagcttggggattgatatcttcatacaaatttgatatcatgttgacatatgtaaatggatttcccatctatttatacagatggtatttgttgttcattgataggaacagttctattgttgctcaattgtgatgtgttcctgtgcctgacagaatcataaggatgttcttgttatggtggatcatgaagattaccctgctctattagagtatctgcaaggaaaacaagatgaccagcaattccgcaagatgctagcatggaaagctttccaacatgtcgcttcttatgattcagctgtctcagaatggttgtggaagcaatcgaacaaaggtattaacactaactttttgtaatgatctagtttatatatgatggttttgtcaacatttcctcagatatcattacactatcatgttctcatgtaggagatgtattccccccgaacttcaccgtgcccctgtccctgaaatctacacttcgttatggtgaaaatcctcatcaaaaagctgccttctatggggacaagagtctttctgtagttaatgctggtggtattgcaacagcaattcagcaccatgggaaggtgagaaaatcatgcctcctttcattcaactaaaatgaaacacggatagtaacttacaaaaaaatatctctttcaacttgatttttactacttgcatgtttatctgactttagtatttgtttttttcagtacatataacctgtttctggccatttccactctttgcgaactcatgttgtaccagtaatgtgacgtttcttgtgtttacatatgacattttctgttacaggaaatgtcttacaacaactacttagatgcggatgctgcatggaactgtgtatcagagtttgagagtcctacgtgtgttgtggttaagcacacaaatccatgtggagtagcatcccgacaggatattcttgaagcatacaggttggctgtaaagggagatcctgttagtgcatttggtgggatagttgctttcaatacgacaattgatgaggtatccagtagacttcttgcctctaaacacttgtgttgttgggcatgaccattattcacactatatcatgtttcaggatcttgcaaaagaaatccgtgaattcaggagccctacagatggacagacgcgaatgttctacgagattgttgttgcacccggctatacagaaaagggtcttgagatcctcaaagggaaatcaaagacattgaggatactggaggcgaagagaagtggaaaagggatgctatcactcaggcaagtcagtggtggctggttggctcaagagtctgatgatctaacccctgaagatatcaccttcacaacagtgtccgagagagctcctcaagacagtgagctctctgatgccaaatttgcctggctttgtgtaaagcacgtaaagagtaacgccattgtgatagccaaggtcagtatatttgcctctgctacatgaacaaaataatttgttgatttggtggactaacatgatgctgtggattatcctcagaataactgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttcaggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattcggtaagaacaaatgttgcattactggaaaatctggactctgataatttcctgaatttgtttgcacacaacattaacatagtggcaatcaaaacaaaatgataatgcaaacttcattaatagttggatttatgtttgagttatgacccaggcaaccagcatctgtaggttctgagccaattcatttgctgatcagtagtagttcaatttatgtttgatttatgaccaagctaccagcatatgtaggttctgaaacattcatttgctgatcagtagtagttgaatttatgtttgatttatgaccaagccaccagcatccgtaggttctgaatcatgaaatacttctcttttctttttaagaattacattttaccattgcaaccaccattaccatgttcaacgattacttccttgcacgttctgtcacacacactacaagaacagctttgcaatgttgtcacattttgtaagaatcacatttttcgtgttcgttgatgccttccttacaatgcaacgacagcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccgagcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctcctcttcaccggcgtcaggcacttcaggcactgagctagctagcctcatgaaccttgatcttcctgcaaaaaaaggaaaaaaaacatgggcatgtcagatcgatcgctctttctgtatcacaagagcatgcagatcgaccagcgtttgatcaccttgagaaaaactcttgacggcttgtactaggctgcctgccactggtgtgacagaatttgatcagcttgacattttgcaataagattcatggtgataataagattaggatgtctcgtactc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0206600, RefSeq:Os08g0206600