Os08g0229600

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0229600| Description = Exo70 exocyst complex subunit family protein| Version = NM_001067828.1 GI:115475392 GeneID:4344989| Length = 11120 b...")
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Gene Name

Os08g0229600

Description

Exo70 exocyst complex subunit family protein

Version

NM_001067828.1 GI:115475392 GeneID:4344989

Length

11120 bp

Definition

Oryza sativa Japonica Group Os08g0229600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:7892631..7903750

Sequence Coding Region

7892633..7893049

Expression

GEO Profiles:Os08g0229600

Genome Context

<gbrowseImage1> name=NC_008401:7892631..7903750 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:7892631..7903750 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgccgcgttgaatccatggacctgccatcttcggccctgatagaaacaagcatgacacagaggtacatagatacttacctccatgtctcctggtcccctctgctgagttgcctgttcattgaaaacccttctattagtcttggaaagacaagagccggcaaacctttcggctttcgaagatacttgtcacttgataggtttgagtcagaattccaaagaacctacacaaatcacaagttttggaaggttccaaaccctgaccttcggcagagactgcgtcaagccatcgtccagaaagtcgtcacacactatagcatgtatctagaggagcgagcagcaaggggaatgcacaatcaaccgcccaagtccacgcccgagcagttgaaggagttgttggatgaattatttgaaggatga</cdnaseq>

Protein Sequence

<aaseq>RRVESMDLPSSALIETSMTQRYIDTYLHVSWSPLLSCLFIENPS ISLGKTRAGKPFGFRRYLSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVT HYSMYLEERAARGMHNQPPKSTPEQLKELLDELFEG</aaseq>

Gene Sequence

<dnaseqindica>3..419#tgcgccgcgttgaatccatggacctgccatcttcggccctgatagaaacaagcatgacacagaggtacatagatacttacctccatgtctcctggtcccctctgctgagttgcctgttcattgaaaacccttctattagtcttggaaagacaagagccggcaaacctttcggctttcgaagatacttgtcacttgataggtttgagtcagaattccaaagaacctacacaaatcacaagttttggaaggttccaaaccctgaccttcggcagagactgcgtcaagccatcgtccagaaagtcgtcacacactatagcatgtatctagaggagcgagcagcaaggggaatgcacaatcaaccgcccaagtccacgcccgagcagttgaaggagttgttggatgaattatttgaaggatgatgatgagttcaatgcaattgctatggaaaattcacctcaataacttaggcatttcagttgactctttctcaccattggttacgcgcttaaaggtttgtgctctagtcaacactcactctatggtcgtcttttggtgatgatggtgacaggctaatttcctgccaaaaaaaaaagtttgaatttcacttcagacttctggaaactactccaaaaaaaaaattcacccagatgctatactttgtagttttaatctttgcattacaatttcattatcctctgtacagagtatatattataatcgctttgcttgtactttggttttctagtgtgtgcccgcaaagtaagaactacttcctccgtcagtaacaagttgtaaaatcctaaaaaataacttaattgagatgttagcttatcaacaatctgttcctgtcttcttgcataatactttattttgtggtatgttagcaaagcaataactaatccggtatgctttggctattaagcatttgtatgcaaaatcggacacgggccttcatattatcttcagttaaggtgaactttatggcatttgtatggcgcttaaacctcccttccttcaaacgcctatgcaatgtgcttttcaacacactactacaaaaaccatctttcgtggcggccaatttagatttgctggcggaatgctagtgaagatcaaaatctttgctagcggttatcggccgccagcgaaaatcgattttcactagcggttgtgttataccggccgccagcgaaaaacaatttttgctggcggttgtgttataacaaccgccagcgaaaatagtggcccaagttaaaaaaaatgacagagcaacaccgctccgtttgcctccgtcaacaccgtttcaaattattcccaaatccactcctcgattcacaaattcacataaatttacatcaacaatttacaataaaaacagtcagaattttccattcacattgcacacaaatcaaccgatattttccattcacgatcaacagaaatccacacaaatgcacacaaatctacataaattcacagaaatccgagcaccaccgcccgcggcccgacggcgtcggtcgtgacgaggtcgaggccccgcggtcgtgctccccgcgccaccgccggggcggatccgtgctcctcgagccgccgccggggcggatccgtcctccccgcgcccgtcctccccagcggcggcctcctcccatcggacagatatgggagaggggagaggaggggatgggaaggcgcggcgccgccgcttccttcgtggtcgccgtcgtcgccgcttccgttgtggtcgccgttgtcgccgtcgccagtcgccgtcgtcgccgtgcacatccgcaccgccggccgggcggatccgtcctccccacgcccgtcctccccggcgacggcctcctcccctcggactgatctgggagaggggagaggaggggatgggagggcgtggcgccgccgctttcttcgtggtcgccgtgcacatccgcgccgccggccgggcggatccgtcctcccagcgcccgttcttcccggcggcagcctcctcccctcggaccgatctgggagaggggagaggaggggatgggagggcgcggtcccgccacttccttcgtggtcgccgtcgtcgccgcttctgtcgaggtcgccgtcgtcgccgtcgccagtcgccgtcgtcgccgtgcacatccgcgccgccgctggggcggatctgtcctccccgcacccgtcctccccggcagcggggatcccgccagtcgtggtcgccgtcattggcgccgcgcccctccaaggaggaggttgggggcgcaaggaaggaggaggggagactggagagaggtgggggggggaggaggagagggaggtgggtgggtagagaggagattgaggagagagaggtagtgggtgggtgggtgccgggtgggtgggtatacctggccaaatgggccgtgccaagccgggccggcccgagcacggcagtactgtagccggcccaggcccggcacggcacgccagcctgtgggctgtgccggcacggcccgttatcccgtgccgtgtttgggccgatgcctcagcccgtgggctggcacggcacggcacgtttactgtagcgtgccggcacggcacggcccaggcatggcacggcccaccggcccatttattttttctacgattttctaatttttcccatatatttctcatatttttttatttttttccacattttatcctatttgtaccatatattttatgatatatttcctaaattttcctcacatttatcctatatttatcattttttcctttatattatgttttttctgccttttttctttttttcccctcaaatttcaatttttatgggccacatgtactagtgggccggctaccagcccacgtgccactacagtagccgtgccggcccggcacggcccagcaccttcttgggccgtgcttgggccgtggccttggcacgtgggccggcacggcacggcccgctacaggagccgtgcctaacgggccgtgccgtagtgggccgtgccgtcggcgtgccgtgtcgtgctgggccgggccgcccgtttggcctgctatatgggtgggtgagggaaaatatctcagcccgcgcagattttaaatgtcgtcaaatttttttagcgggctctgttttttcgctggcggaactgtttagtaaccgccaatgaaaatattggttttcgctggcggatacttaagaggtccgcctcgaaaaatagagtattttttatggcggacgtcttaacatggccaccagagaaaatcagttttcactggcggtcctatacccccacccctccttatgtttttatgacggttttagcatataaccgtcagggaaaattatagtgacgctatgaaaaattgttttctttgtagtgacatttgcaaagcgttggcgaggtctttgatagtatggcgctgtctaagcggcacatcttcgatgccattcactggtggagaaaccatctttcgtcggtcggccgatttccacaatattcccggatgtaataaaaaccggggctaaagatgatctttagtcccggttcaaaagggtaacgggcatatttgatttttagtcccggtttgtgttaccaaccgggactaaagatcatctttagtcccagttcgaatgctgtcaggtcatgtcaggccccccccccgggatctttagtcccggttggtgctaccaaccgggactaaagtctcacccctatatatatatgtcttcttcctcctccagctgcccgagcaagcttcaaaatttcttcaaaaaagaggggaggtcatgccaaaatttctattaaatttattttggtgattacatacaaatcggaggtgcctaaaaggtttgcaacttcatcctccaatgttttttttttgtcatactacatttgcacctatgttttgcacactttttttgtctccaaaatttagttgtaagttgatgagagagaaaatgtgtgtggggaagaaagaatatatagaaatttagttcatttgctaaacaaggttttataaaatagttgagaaggaaaactctagtgaaagttaatcttaaataatagaaaacaaactaaaatgaaaattaaaagaagtaaaacacattaaaattagtttaaaactttacaaatagtttttaagaattatttggtgtaatattttatgatttttgtatgaataaagatatcttataattattgtatgactgtcgttattgtaagaataattatttgtgtacggtttttttgactcatgtagatggatcggcaatggatgtacgctgaccggcggtccaaagagtttattgacggcgtgcactattttttgagagtggccgaagctaacaggcaaaggggttttatttgttgtccatgcaataagtgtaaaaatcagaaggagtattctgcatccaggactattcatttccacttgtttgagtcggggttcatgccaagctataattgttggacatcccacggagagcaaggtgttgaaatggaagaagatgaagtggaagacgacaatattccggactttgctcagtatgttggatttgaaggaaatcaaacgggcgaggaggaaatagctgctgatggtaacgacgttgcggatgatcttggtcagatgttgcaggacgccagggaggactgcgaaagtgaaaaggaggcccataaattggacaagatgttggaggaccacagaacttcgttgtacccaggttgcgagcaggggcacaaaaagttggataccactctggagttgttgcaatggaaggcaaaaaatggggttagtgacaaggcatttggcgatttattgaaactcgtcaagaacattcttccagggggaaacaaattgcccgagacaacgtacgaggctaagaagatagtctgcccgttaggactggaagttcataagattcacgcatgtccgaacgattgtatcctatatcgcggtgaggagtatgagaacctagaagcatgccctgtttgcaaagcactacgatacaagattagacgggacgatccaggagaagttgacgggcagctaacaaagaagagaattcctgctaaggtgatgtggtatttccctataataccacggctaaggcgtttgttcaggaacaaggggaatgctagaatgttgcgatggcacgctgaagagcgtcaacaggacgggatgctgagacaccccgccgatggttcgcagtggcgaaacatcgacagaaaatttaaagaatttggaaaggacgcacgaaacatacggtttggtttgagtacggatggcatgaatccatttggagagatgagcagcggccatagcacttggcccgttacgatgtgtatctacaacctcccccctggctatgcatgaagaggaagtacataatgatgccgattattattcaaggccccaagcaacctggtaacgacatcgacgtgtacctaagaccactggtcgaagatcttaaacagttgtggaagaaggaatgtgtccccgtgtgggacgaggacaaacaggatgagtttaacctacgagcgctgctgctcgtaaccatcaacgattggcctgcacttagcaacctatccggacagtccaacaaggggtacaaggcttgcactcactgtatggatgaaacagaaagtacgtatcttaagcactgtaggaaggttgtatacatgggtcatcgtcgattccttgcagcaaaccacccggtacggaagaaaggcaagcacttcgaacataaggccgaccaccgtacgaagcctaaacatcgcagcgggaaaacagtgtttgctatggttaaagatcttaaagtagtgttcggaaaggggcctggaagccagcatatagagagcgaagatggtcacgcggcgatgtggaaaaagaactctatattttgggagttaccatattgggaattcttggacgtacgccacgcaatcgacgtgatgcacctcactaagaacctttgcgtaaaccttcttggcttcctaggtgtatacggaaagtcgaaagatacactggaagcacgtaatgatctgaagcatatggaacaacgcggcgaccttcacccggaaccaaaggagaaaggaagccattacttgagtccagccagctacactcttagcaaggcagagaaggaaagtatgtttgaatgcttggagagcataaaggtaccgtctggatactccacgaatatcaagcgaataataagcacgaaggagaagaagttcacaaacctaaagtctcatgactgtcacgtgttgatgacacaactgctaccagttgtaataaggggtatccttccagacaatgtccgggcaacaataacaaagctatgtgcattcatgaacgcaatttcgcagaaggtcatcgatccggatagattagaagcccttcagaatgaagtggtgcaatgtctcgtcagttttgagttgatattttcaccttcatttttcaatataatgacgcatctgctttgtcaccttgtgaaagagatccgtattctcgggcctatgtacctacacaacatgtttcctttcgagaggtacatgggcgttctgaagaagtatgttcgtaaccgtgctcgtccagaggcaagcatcgccaagggttatggaacagaggaggtcatcgaattttgcgtagaatttatccaagaccttcgcccaatcggggtacctgaatcacgccatgaagggagactacggggaaagggaactctcggaaggaaaacaataatgacggtagacaacaatttattccgtaaagcccatttcactgttctgcaacactcttcattggtagctccttacatcgaggagcacttggctctagttcgcgccaggaacatcggtaagtccgatgcatggattacacggtatcacattgatactttccccgcgtggctacgacaacatctcatgggtaacgagtcgatcaaccaacaacttgccttcctggcgaggggaccgtctgggtcgattgcgacattccagggatatgagatcaatgggtacacattctacacgagagcccaagacatgaagagcacgaaccaaaacagcgctgttcgtgtcgatgccatgggacacgatggaacaactgccacgtattacagtgccatcgaggacatatgggaacttgactatggtcctctcaaggttcctctgttccggtgccaatgggttaggttgactagtggaggcgtaatgatttatgacagtgggatgacaactgttgaccttaacaaggttggatactcggacgaaccttttgtccttgccaatgatgtaacgcaagtctttttcgtgaaggacatgtctagcaaaggaaagaagggcagagggcctgatgagcctaagcgtcaagtggttctcccaggcaaaagaaaaatcgtcggagttgaggacaagactgacgaggattacgatcagttggatgggcaaccccctttcacggtgacgattgaccctagcatcctcctatcaaatgaagacaccccttactcacgcagcgatcacaaggagggaacaatagtgaggagaaagtacgtgcggtcaaccgtcaccgccgatgtaatgccgtaattattgtgtacacgatgtaaactattttggatgtattgattatccatataaatcaattgatgtatggcatatgttaattacgcatgattattagaggtttcaacaagtttaaatcatgtatatgctagttatatgtgatacttacaatttttaaaagttttaaatcacacaggtggcaatttcatatgtatgttaattagagtttttaacatttaatttactagcattcatatgctaattataattgactagaggatttttaaaagttttaaatcacgcaagtggcaatttcatatgttaattagagtttttaacatttaatttactatcattcatatgctaattataattgactggagaatttttaaaagtattaaatttaatatatttttaaaactatcattcatatattagagtttttcacaatttaatttactatctttcatatgctacttatatatgactattcgaatttttaaaaggtttaaatcatgcatgtggcatttacatatgttaattagagtttttagcatttaatttaatataattcctacgctaagtatatatgatgattacaatttttattaattttaaatcatgcagtatgtacatatatatcttaattagagtttttaccaatataataatatcattcatatatatgctaagtatatatatatatatattggaatttttattaattataagtcatatatttgcttattacgatttatccacttaatttattacagacaaaaataatttttcgaagtaattgtcattaatctttgtactttaaataatgttaatgcattaacttctattttataaacacatatgtaagcgaaaatcatatgcagtgctataatctttagtcccggttcttaaccctaaccgggtttaaaaagaatttcgaaatagcgggaaaagatatttactcccggttgttgagaacaaccaagagtaaagatccgggggtatatatattcccggtgcgccctcgtcttcttcaccaacacttagacgttttcggccgatcgatctctctcggcctctctccttcgccgccactgcctagggcaaatccccgtgccgacgccgccgtatctcgccgtcgtctcgagctcgtcgtcctagccgctgcctccgcctcctccgctgccgccgcatctctggggtgagagccgccgccgccagatctcccttcatctcgatctctccgatctcgatctctctccgtcgcgccgcccgccacgagacgccgcgccacgacgacgacgcgccacgccgacgccgcgccaagccgccgccggcacgccacgccgccgtcttcgccgccgcgcgcgcaatgccgccgccggcacgccacgccgccgcctttgccaccgcgcaacgccgccgccgcatgccaacgccacgccgccgccgccgccgtcgccacgccgccgccgccttcgccgccgcgcgcgcaatgccgccgccgccatgccacgccgccgccgccacggccccgcaacgccacgccgccgccgccgtcgccacgccgccgccgccgccgccgccgccgccacgccgccgcgccaaccgccgccccgatgccgccacaccgccgttaacgaacgagaacgagaacgatcgaacgaacgagagcgagaacgaacacgtcaacgtacgttgccgcgagaacgtgaacaagaacgagaacgatcgaacgaacgagagcgagaacgagaacaatcgaacgaagacaagcgagaacgagggaacgaacgtgaatgagaacaagcgaacgaacgtgaacgagcgaacgttaacgtgaaatgcaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgttacttcgcatttatcctaatacatctttttgtatcttgcagaaaagacgtgttgtcggagtcgtccgtcaagcctgagtggaagagctagccctagaaggaattggaggaggcaagtgacgtaataatataaatgattgttatatttgtaatgcaattaattaagattattagacctgtaattagacttatcatataagattgtgtagtgttctaatattatttgagttttaatataagattattttattgcaaattagacttagtatgacattattgactacggaattggtgcgactcctagcaattgactattgtagtcttaattagacttagcatatacgcacgaaacacttagcatacatgactattttagtcttagcatgtaatattatttgagttttaatataagattactttatttgtaattagacttagtatgtaattattgactacggaagtggtgcgacaagtagcaattgactattgtagtcttaattagacttagcatatacgcacgaaacacttagcatacatgactattttagtcttagcatgtaatattatttgagttttaatataagattactttatttgtaattagacttagtatgtaattattgactacggaattggtgcgacaagtagcaattgactattgtagtcttaattagacttagcatttacgcacgaaacacttagcatatacatgactattttagtcttagcatgtaatattatttgagttttaatataagataattttatttgtaattagacttagtatataattatttactagctagggttgtataatatacgtcacctagacttagcttatatcacgatttgtaattagacttagcacgtaaggttgtgtagggttctaatgtacgacatttacacttagcatacatgacttagattgttaaaacataaatgtctcgtgacttagcagatgtttcttgtatcaacagatggctgaccgcgatgaggaacagatattgtacgatacaatcgcggagggaagcagccagtactggaatgaagaagaggggaacaaggatccaaaccagtacttgaacgaggaagggaacgtggagagggatgcggaggggaaccagcaggggcacgtggaaagggatgtggaggggaaccaggaggaggaggctagtggtagtcaaccctccgttggacagaagagggcacgcgggcaacgaggtgcagcgaagaagcttgagggtcggcacatcataacggaagtggaagaagatggacgtcctagtgccccggccgaagccgccaagaactatgtacgtcacagcggttgggttgtgcgggataacgtgcctgtcagtacggtgtactggcgaagaacaagggcacgcggagatcatgagagctttgtcccagattcggagaaagagatgctgtggaccacaatgctcgagacattcacccttcctgcgggtacagaggacaaagtgaaaaggtggactctgaagaaaatggcagaacagtttcagagcttgaagggagatctgtaccagaagtatatactgaaggggcagacaccgaacttcgacacattcccaaagctaagggatcactgggacgagttcgttgcatataagacaggtgaacaagggcaggcgatgatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0229600, RefSeq:Os08g0229600