Os08g0230200

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0230200| Description = Conserved hypothetical protein| Version = NM_001067832.1 GI:115475400 GeneID:4344993| Length = 4599 bp| Definition ...")
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Gene Name

Os08g0230200

Description

Conserved hypothetical protein

Version

NM_001067832.1 GI:115475400 GeneID:4344993

Length

4599 bp

Definition

Oryza sativa Japonica Group Os08g0230200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:7938709..7943307

Sequence Coding Region

7940746..7941633,7942189..7942344,7942471..7942682,7942820..7943012

Expression

GEO Profiles:Os08g0230200

Genome Context

<gbrowseImage1> name=NC_008401:7938709..7943307 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:7938709..7943307 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccgaccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactgggggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcgcggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggttccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttcatcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaataagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatggcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatcagggcctatctcctctggacctctgaattcatctggtgctccacgaaaagtatcaggccctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagctgttacaaacctgaatgccgatgatggttactctattaagggcagcattcctaagacaatactctggatggttattctgctctttttgatggggttcatagcaggtggtttcattcttggagctgttcataaccctattctgctggtagttgtggtggtcatattttgctttgttgctgctcttgtgatttggaacatttgctggggaacaagaggtgtgactgggttcgtcagtcgctatcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgctaacactgagcaccgccaatttacttggggtcttaggtcaatggagagacatgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaacaggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaacccagataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagtgatgatcggataatgcgcctgaaagaaggatacattaaggagggcagcacggtgagtgttatgggggttgttcaaaggaacgacaacgtgttgatgattgttcctccatcggaacccatctccactggctgccagtgggccaagtgcatcctccctactagccttgatgggctagtcttaagatgcgaagatacatcgaacatcgatgtaataccagtctga</cdnaseq>

Protein Sequence

<aaseq>MGSRFPSHQLSNGLYVSGRPEQPKEKAPVICSTAMPYTGGDIKK SGELGKMFDLHVEKSRKSGPLGNQPSRNTSFGGAGSNSGPVSNALGRSNYSGSISSSV PGAGGSARAKSNSGPLNKHGEPGKKSSGPQSGGVTPMARQNSGPLPPVLPTTGLITSG PISSGPLNSSGAPRKVSGPLDPSVSMKMRATSFAHNPAVTNLNADDGYSIKGSIPKTI LWMVILLFLMGFIAGGFILGAVHNPILLVVVVVIFCFVAALVIWNICWGTRGVTGFVS RYPDADLRTAKDGQYVKVTGVVTCGNFPLESSFQRVPRCVYTSTCLYEYRGWDSKAAN TEHRQFTWGLRSMERHAVDFYISDFQSGLRALVKTGYGARVTPYVDESVVIDINPDNK DMSPEFLRWLRERNLSSDDRIMRLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPSEPIS TGCQWAKCILPTSLDGLVLRCEDTSNIDVIPV</aaseq>

Gene Sequence

<dnaseqindica>2038..2925#3481..3636#3763..3974#4112..4304#attcccccctccccctctgctgctgctgctgctgctgccgcctcgactcctcctcctagatctggaagctcactcccccccccacccccacccacctcctcgccgccgatctccaccgcattcccctcctcctcgtcgccggcgacctccccccgccccgtatgccacttcacttcttccttcgtcttgtgttgctctagatctggaagctcttttttcgtttctttctttttttttttgttttggaaaaaagaagaagaagaagagagactaactttgttgcctcgtcggtgcttgcttcgcccgccagcctgatctccgtcgtccagcggcatcgtcgtcggtgagcgaaggtgagagcatcgtcctcttcttcttcttgctcgccgctctcgtctaccacgcacctaccattcctctctttgtgttctgttgttctgctgttctagatctggaagctcttctctcttttttttttcttggattaacattagtactagtgataacagtttcaccaaaaaaaagagagaaaaatttggggctcaactggacccgcaatgtcatgttgctggatctgctgctagtttctggatctgcagtagtggcattgttgccatctgtgttggagctgatttcttttcttttcttttctttttcttttcttgggtgcagcatattctgctctgttcatgcttcactagatttatttattatcaagttcaaggttagaactcgctatatagcatgggcaaatcaaatctctggagtagtaagaattcttttcacaggtgagttggagggtggttgggggacccgctttggagtgtgttgcaggttatgtagtagtacatgtgtttgcaacattgcttcttgttgaaactaatgctgtgccatgtactacctgccggccttctttgctgatgctttaagctaaatttagaggagtaattatgtcggtggggggaaaattgttgtttattccacagcttgcgcgagctgaaattggtttggaacaatgttgtgcggggacgcatttcttgctaccgtagtcactgtcgatcttttccgcgggatgtttttaatacttgactgtggttttggttgctagggaggcatctccatcagttctgcatgttttgtggtgcttgtctgtactcggattctttttggagggaactaaagattactttttcgtgataatacgtgatatcggaaacatgctgctcaaactagtattggtgctgctaaagcaaaactctttcctcaatgtgggctgctagattgagtatttttttaaccattaataaagactttgggccatctttaattgtccactatggctcatatatttcctagaagtttactgttgttcattctaagaaaagaataactgcaccttttttttagactatgaagctttataatcagcatttgtagggactagcttcagttcgaagtgtttttttttagttaggacattggtgcttataaattagaagacaaatttattgtaggatctgatgattacgtggtgtaaacatagaatgcccttaatagattactgctccttttgataaggtaaattatgtcattaatgcacaatgttagctgttctactgctagtttcccgccattagctaatgtattttcttcgaaaggaaggccattatgtactgttcaaacctcacagaacacaccacaaaaggttcttctatccacgatctctttcatctctagcagtacgtgcatgtaggacaatttttgtctcatgtcaggcttgcatttttcatgatattcgtagtgcgattgtttcctctgggtgacataatgttgtatctgatttgcgcgttcttttttttttttttacttcagctatgtgattttgtttgactctctgtttttaggtgctgatacaaggtgttgtctgagtctgcaaatattgatgatgtgcctaaaagtttgacagtcttgcttgaatacacagcagcattacttggttacactctgaaggtgtagttgcctttgttggtttagaacatgggttcacggtttccatcccaccaactaagcaatggcctttatgtctcgggccgaccagagcaacctaaggagaaggctccagtcatttgctccacagcaatgccatacactgggggtgacataaagaaatctggagaactagggaaaatgtttgacctccatgttgaaaagtcgcggaagtctggtcctttgggtaatcaaccttcaagaaatacttcatttggtggtgctggttccaactctggaccagtttctaatgctcttggtcggtccaactactctggttctatttcatcatctgttcctggtgctggaggatcagcaagggcaaaatcaaattctggacctctcaataagcatggagaaccaggaaagaagtcatctggtccccagtcaggcggagtgaccccaatggcacgtcagaattctggtcctttacctcctgttcttcctacaactgggctgatcacatcagggcctatctcctctggacctctgaattcatctggtgctccacgaaaagtatcaggccctcttgatcctagtgtatcaatgaagatgcgtgcaacttcttttgctcacaacccagctgttacaaacctgaatgccgatgatggttactctattaagggcagcattcctaagacaatactctggatggttattctgctctttttgatggggttcatagcaggtggtttcattcttggagctgttcataaccctattctgctggtagttgtggtggtcatattttgctttgttgctgctcttgtgatttggaacatttgctggggaacaagaggtgtgactgggttcgtcagtcgctatcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggtatgtgaattactgatatctagttttaatttgattattctgctgtttagtcttttattgtttcattattatttttctcttcccctgcatcagcttgcacagctgattagaatttattatcaagatcacattattaatatgtgcctttgcacagcataatttaaattcttattatatgattagtgatgtgatgttagcttcattttatttctcagcagcttttgtgttgaggtattttatataagtttgacatagtaatttagatggtcatgagtagtaacaatatcaatattgataaacaaccggaacaaactttcaatggtcagaacgtaggagcttgttttttcatataggtttgattagtgtcatcaccaagtaatattttaacatagtacaaacatgacttcttatgctacaactcgtaaatgatggtggagcatcttgttgcctaatactttctgaaaaaaatgatttgttcttttacggttaagttgttttatcttagattggctttcttttatcatcatttaccaaccaacatattgaacttcacaggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgctaacactgagcaccgccaatttacttggggtcttaggtcaatggaggtgagtttcttttcaactgaaaatttgattatcatcaagatgggatttcaatgaagaatgctaactgtcaaccctaccaacttagcccgtgtcctcatattttctttttccttgccatgattgcagagacatgctgttgatttctacatctctgatttccaatctggactacgagcattggtcaaaacaggatatggagcacgggtaaccccttatgttgatgaatctgttgttattgacataaacccagataacaaggacatgtctcccgagttcttgagatggctgcgtgaaaggaatctatcaagtgatgatcggataatgcgcctgaaagaagggtactcttcttgtcctagttctgcatccgaattctggaacacgcataagcttgaaattatttcaatcgcagtcattgcctgacagttaagtatagttgttacctatttcatttgacacatgggcatttgcactgcagatacattaaggagggcagcacggtgagtgttatgggggttgttcaaaggaacgacaacgtgttgatgattgttcctccatcggaacccatctccactggctgccagtgggccaagtgcatcctccctactagccttgatgggctagtcttaagatgcgaagatacatcgaacatcgatgtaataccagtctgagcttagctttgttctggcagctactcctagaaagaaaatgcctgtcaaaatctttggatttatttcgtgggatgttagagttgaaagatgtgcaaatgcagggtgtgattatggctaagtacaatatcggtggtctattatttgggtcttggttgtatagtattttatgtattttttctctcttcttttttctttcttttggtgatctatggatacttgtaacatggatggcttgagttgtaccttggagctgtttggagattcagtggaatcgagttcacaaggttttttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0230200, RefSeq:Os08g0230200