Os08g0240000

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0240000| Description = Similar to STF-1 (Fragment)| Version = NM_001067866.1 GI:115475468 GeneID:4345032| Length = 3069 bp| Definition = O...")
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Gene Name

Os08g0240000

Description

Similar to STF-1 (Fragment)

Version

NM_001067866.1 GI:115475468 GeneID:4345032

Length

3069 bp

Definition

Oryza sativa Japonica Group Os08g0240000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8471525..8474593

Sequence Coding Region

8471712..8472207,8474043..8474593

Expression

GEO Profiles:Os08g0240000

Genome Context

<gbrowseImage1> name=NC_008401:8471525..8474593 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8471525..8474593 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacaagggaggagagccggcagcaagagcagctgtgcgccatggtggaggccccgtcgcgttcaaggacgctgtcgacgtcgacgccacgccggtgcgccctccgacggagctcgccgccgccgtctccgccctgccggcgggcgtctcctacggccagccgatgcgctgctacggggggacctgggtgttcgagagctgggcgcagggcgtggtcgccatgcaccgcggcggcctcgtgccccgcgccggcgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccaccatggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacccgcacgactgcgtgcccctcctcgacaggctcttcgccgccggccgcgacgcgcttctcgacgagctgccgtcgccgaggctcatgtgcacgcacatgccgctctcgctgctgccgccggcggtggctgacggcaactccaacaccaagatcatctacatttgcagggaccagaaagatagattggtctccatctggcactttcggaaacgcaatgtgccagatctgttgctccaagaagtgtatgagtctatatgtgatggcactgggtttgctggtcctgtctgggatcacttgcttggttactggagggcaagcaaaatagatctaggccgagtgctcttcttgaaatatgaggaggtgcttcgagacccagtgaacaccgttagagagctcgcacaatttgtcgggcagccattctctgacacagaggaagaagctggcattgttgcggagatcgtcaagctatgtagcctagagagtctaaggagccagaaagccaacaaagaaggcatacaaggtgtgtacatcaagttctcgcacgactcgtattttaggaagggggtggaaggggactggaggaaccacatgactcctaagatgggcgaacatctggattcgattatgcgagaaaagtttgatggatcggggctcaccatatga</cdnaseq>

Protein Sequence

<aaseq>MANKGGEPAARAAVRHGGGPVAFKDAVDVDATPVRPPTELAAAV SALPAGVSYGQPMRCYGGTWVFESWAQGVVAMHRGGLVPRAGDVLLASLPKSGTTWLK ALAFATMARRACPPPASPDHPLRRLNPHDCVPLLDRLFAAGRDALLDELPSPRLMCTH MPLSLLPPAVADGNSNTKIIYICRDQKDRLVSIWHFRKRNVPDLLLQEVYESICDGTG FAGPVWDHLLGYWRASKIDLGRVLFLKYEEVLRDPVNTVRELAQFVGQPFSDTEEEAG IVAEIVKLCSLESLRSQKANKEGIQGVYIKFSHDSYFRKGVEGDWRNHMTPKMGEHLD SIMREKFDGSGLTI</aaseq>

Gene Sequence

<dnaseqindica>2387..2882#1..551#atggcgaacaagggaggagagccggcagcaagagcagctgtgcgccatggtggaggccccgtcgcgttcaaggacgctgtcgacgtcgacgccacgccggtgcgccctccgacggagctcgccgccgccgtctccgccctgccggcgggcgtctcctacggccagccgatgcgctgctacggggggacctgggtgttcgagagctgggcgcagggcgtggtcgccatgcaccgcggcggcctcgtgccccgcgccggcgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccaccatggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacccgcacgactgcgtgcccctcctcgacaggctcttcgccgccggccgcgacgcgcttctcgacgagctgccgtcgccgaggctcatgtgcacgcacatgccgctctcgctgctgccgccggcggtggctgacggcaactccaacaccaagatcatctacatttgcaggtacccataaccatagctatagctagccatcccttattcgttatattgttattggtactccctctatcccaaaataagtgcagttttgcactattcacgttcaacgtttgatcgttcgtcttatttgaaaactttttataattagtatttttattgctattagatgataaaatatgaataatattttatgtgtgactaaatattttcaaaattttcaaataagacatacggtcaaacgttggacacggatatccacggctgcacttattttgggacggaggtaatattattttactaaggggaatcttagttttgaatcatatccggtcgttttcgtttttgtacaccagccgaaatttatacatatcagattcaaatattagctgctctcatctcaaatctcatgtgtgaaaactttaaactaattttggaaatggtatgtatttctcccttaaaaatgagtattttgccatatggccgttaaatagagattttttatttcccaaagaaaagcgttaggaagaaagatggtacatgaccacgtgctgtgctatgtgtgatacaactgcgtagtattattatgacagaacgggaccctctaccaaatatggtgatgtagcatgtttcctatttggttattgcaggatctagattagctggtactttgttgtcattatttaacattgtatttttctataagtaaagtacataaaaccctactattatggtgtaagttacgtaaaactataaggattttgatacgtggcacatcacaccggatattatggttctaaaatttcataaaaccgtactattgaacattttgatttttgatcaaccacaccttttagttctacaattacaatttaaatttttgagaattttattcatcatataaatgttttgtccactttttaaaatcttgatataggagcacattaaaatggttacacataatacttgagattatgtgtcacatgccaaaatctctatggttttgtacaacttgaaccataataggtggggttttatagaatctactcttttctatacaagaagataaacgcacaattacaaccatgaccttggtaagagccccttcaaagcaaaaagaaatccccttccacacccactcccctccgtctgagagtcatccttgcagtattggtagatggtgtctttcactggtgccattatcctcctacaagagttcaaggtgatgaggtcaaataattggcttcccttttccttatatccatatcgatggagaggcagttcatgtttttctatagtgtcgcaagcttctagtccctctgttctgaaatataattatctttgccccctcttgtatgtcccaaaataagttcatctttgagtcatcattgcattggattttatgaaagtaggggacaaatgcattaattgtaattaggtaagtaggggactgataaagtagagggtattctagtctttttgctttgtattagtatgcaagagttcggtgaaaaacaaacttattttgtctcccttgcaatgagtcatgatgctctagaccatggtgccctttgagaagtaaagagccccgtgtctcgtgtgttagcttgttggacttgttcaacaacctcgatctctaccctaggaaaaaaatattgttcttacatacttgatccaaacattgtccaaaatttcatgaattcgcaaaagcaagtcctggatacaatatgtatatttagaaagagagaaattgcaaaccaaaatccaaaacatttattcacatagtattaactttagtgacaatgaaacattgctttactctagcttgttatattttgtagggaccagaaagatagattggtctccatctggcactttcggaaacgcaatgtgccagatctgttgctccaagaagtgtatgagtctatatgtgatggcactgggtttgctggtcctgtctgggatcacttgcttggttactggagggcaagcaaaatagatctaggccgagtgctcttcttgaaatatgaggaggtgcttcgagacccagtgaacaccgttagagagctcgcacaatttgtcgggcagccattctctgacacagaggaagaagctggcattgttgcggagatcgtcaagctatgtagcctagagagtctaaggagccagaaagccaacaaagaaggcatacaaggtgtgtacatcaagttctcgcacgactcgtattttaggaagggggtggaaggggactggaggaaccacatgactcctaagatgggcgaacatctggattcgattatgcgagaaaagtttgatggatcggggctcaccatatgatgcgccattatggccggggtttcatcttttaatttgtagtcacagttttcaagctatgtgtttcataataaaacaaagcctcctagcctgtttggaggcttaactttaactgtttatgcttataaacaggtacatctatgacctatgtaattttcggtgcaccaaataaaatccttccgatgctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0240000, RefSeq:Os08g0240000