Os08g0241400

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0241400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001188532.1 GI:297726194 GeneID:9266655| Length = 181...")
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Gene Name

Os08g0241400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001188532.1 GI:297726194 GeneID:9266655

Length

1810 bp

Definition

Oryza sativa Japonica Group Os08g0241400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8581065..8582874

Sequence Coding Region

8581065..8581769,8581950..8582009,8582146..8582292,8582737..8582874

Expression

GEO Profiles:Os08g0241400

Genome Context

<gbrowseImage1> name=NC_008401:8581065..8582874 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8581065..8582874 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggagaacagttggtggccttctattgaccaaagggggctcaatccttgtatatagggaagatagcccgcgccacaaagcgaccgcttgctgtacgcgcactggctgtagcagtaagcttttccgtgacaaagagaagaaaatgcgcaggccaaccaaagaagcagtgattcctcagagatcactacttgtcagtggatccaacaggctgttacctcaaggaagaatggcttatggcagcaggaggaatgcagccggcacctgtagcgaaaccggcaacagacctagaagagaaactgctggacaggatcttctggaccatttgaaagaaagagtaaattcgtcgaggaagcgctcattgagtggagggagtagcccatcatcatcaaacacatctagtgcaggttccttgagtagtagtagtagatcaatttcaagacaattgcatcgatcagttccaaagacaaggaaggatggaggcacaaatggaagcaatgccagaatgcgtagtgatagtggtggaaattctggagcaaatgtgcataggagagctgatttgcaaggacctaccggtaggtttgtttctcaaagcttgttgagacatagaagcagaaatcaagaagaaccagtatctcatttggaaaacagtttgaatgactccactgaatactggcgcttcggtgtggatgaaagtgatgaggatgcttccagtgataggcatagaggaatgagaatggacatcgacgacatgtcttatgaggaattgcttgctctaggggaaacaattggtaccgtgagcactggccttccagaggatgaactgtcaaattgtctgaagagaatccactatgtgccctcagcttcaacaagtcatgaagatggtgatatcaaatgcataatatgccaggaggaatatttacctgccgaggaggtggccgagatggcgtgcaagcattactatcatcttgcttgcatccaacaatggcttcggcaaaagaattggtgccccatctgcaaatccgtcggttctgctacgaaacattag</cdnaseq>

Protein Sequence

<aaseq>MGRRTVGGLLLTKGGSILVYREDSPRHKATACCTRTGCSSKLFR DKEKKMRRPTKEAVIPQRSLLVSGSNRLLPQGRMAYGSRRNAAGTCSETGNRPRRETA GQDLLDHLKERVNSSRKRSLSGGSSPSSSNTSSAGSLSSSSRSISRQLHRSVPKTRKD GGTNGSNARMRSDSGGNSGANVHRRADLQGPTGRFVSQSLLRHRSRNQEEPVSHLENS LNDSTEYWRFGVDESDEDASSDRHRGMRMDIDDMSYEELLALGETIGTVSTGLPEDEL SNCLKRIHYVPSASTSHEDGDIKCIICQEEYLPAEEVAEMACKHYYHLACIQQWLRQK NWCPICKSVGSATKH</aaseq>

Gene Sequence

<dnaseqindica>1..705#886..945#1082..1228#1673..1810#atggggaggagaacagttggtggccttctattgaccaaagggggctcaatccttgtatatagggaagatagcccgcgccacaaagcgaccgcttgctgtacgcgcactggctgtagcagtaagcttttccgtgacaaagagaagaaaatgcgcaggccaaccaaagaagcagtgattcctcagagatcactacttgtcagtggatccaacaggctgttacctcaaggaagaatggcttatggcagcaggaggaatgcagccggcacctgtagcgaaaccggcaacagacctagaagagaaactgctggacaggatcttctggaccatttgaaagaaagagtaaattcgtcgaggaagcgctcattgagtggagggagtagcccatcatcatcaaacacatctagtgcaggttccttgagtagtagtagtagatcaatttcaagacaattgcatcgatcagttccaaagacaaggaaggatggaggcacaaatggaagcaatgccagaatgcgtagtgatagtggtggaaattctggagcaaatgtgcataggagagctgatttgcaaggacctaccggtaggtttgtttctcaaagcttgttgagacatagaagcagaaatcaagaagaaccagtatctcatttggaaaacagtttgaatgactccactgaatactggcgcttcggtgtggatgaaagtgatgaggtacgcctttccattgttacttccataatggatttgcagtatccaccctgtagatgttctgagaatgtattgattattatgtcaagaaaagaatgtaccgatgcagaggaaatgcaatcctcttgcattttgttgctgaccactttgaaacatagagtttaattctttattgtcttgcaggatgcttccagtgataggcatagaggaatgagaatggacatcgacgacatgtcttatgaggtatatctattattcagttctaagagagctggtactaaagtccatatttattcatgtaaacattttagccccaagaaccttttgtttggaatttattcctttccgtttgtttgatgttggttgtgtggcattctaggaattgcttgctctaggggaaacaattggtaccgtgagcactggccttccagaggatgaactgtcaaattgtctgaagagaatccactatgtgccctcagcttcaacaagtcatgaagatggtgatatcaaatgcataatatgccaggtatgttcatttactagcattgcatcattagaatgatctatagtttgatgatatgtgagttgctctggttatttatgatatccttaattccttactgtcaacacttcttccaagacatgcagcaaaagaaaaggaataatgagttttatatccttactgtcgatgctaaatatattttaacatacaaaccattataagtcaatcagatgatataatactactatatagtaaactagtctaaaatatcatgaaaatttgggccaagaacatttctgttatttaatttcgagatgaatgactaatatactgtactgaaaaatatgatgtaccaatcaatcaaacataaattcaggcactggatttgctgaagaaacttcttagtacttgaaaagataatctggtgatgacatgtggacatgttccttctcctgcttatcttttcaggaggaatatttacctgccgaggaggtggccgagatggcgtgcaagcattactatcatcttgcttgcatccaacaatggcttcggcaaaagaattggtgccccatctgcaaatccgtcggttctgctacgaaacattag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0241400, RefSeq:Os08g0241400