Os08g0242800
| Gene Name |
Os08g0242800 |
|---|---|
| Description |
Similar to Sigma factor SIG6 |
| Version |
NM_001067878.1 GI:115475492 GeneID:4345044 |
| Length |
3506 bp |
| Definition |
Oryza sativa Japonica Group Os08g0242800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:8676959..8680464 |
| Sequence Coding Region |
8677133..8677262,8677359..8677540,8677690..8677805,8677951..8678103,8678215..8678491 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:8676959..8680464 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:8676959..8680464 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaattccggcggccggagcctcctctcgtccccgctcttcgccagctcttccccggccttccgcggcggcgccgccgccgcctcctgctcctcgtcttcctccccgtcctcctcctcccgcgccactgtggtgcccatggtgcacgacaccggcggcgggcgagcgtcgtcgacggcgtgccactactcgccgtcgctggtggcggcggagccggaggagcacgtccacggccgctccaaggacgacgacgacgacgccgccgtgtcgctcatgggcgagaaggccttgctggagctgctcctcgacatggctttggaacaacacgcaccagggaagaagctaccagctgaagagagggaagagagtgagttcgacatctatctgagagatgataaaagccatgtcctttaccatccagaattcagctctacatctgtgagttcttcaccattgtccgtaaaatctagcgaaagatcggatcttggtacagcttcagcggttctgacgaaggacgtggcattattagcagaagaaacagacattttagcaacccaactgaaagcatcgcaactttacagtgtggattcgagcaagtcaaatgaagaactgcagagcaagggtcaggtgttcgttagatcgacgaggttactcgagaggagatccaagcggcgttatgctcctcgagcatcgatcgctgatgtttcctgcagcgctgacaattcgaagaagaaagagaaatcaaagaagtatggcagagttcttgaaccagatgagcctttcaagctgttcctaagagatcgggagacgacggaattcctgacagcaaaagaggagagacatttgttcagtaaaatacagattcttatgaaaatagaggaggctcaccggaaactagaagttcaatgcggccgtgagccgacattggcagagtgggctgaggctgtagggatgagcagcaaggagctgcagtcctctattcgcaccggaagacggtgccgggagaagatggctcgatcgaacttcaggcttgtgattcatgtagctaggaagtatgaaggatatggtcttgacatccaggaccttgttcaggatggatgcagtgggttgatgaagacctttgagaagttcaatcccagcaaggggtgtcgattcccgacctacgcatattggtggatacgccaatcaattaagaagtcaatcttcaagaactcaagactaatccggttaccggagagtgtgtatgcgcttctgagaaaggtgggcaaggcaaggatggaatgcatcatggaaggggagcaacccaccaacgcgaacgtagcgaggcgcgccggcatcaccatcgagaagcttgcgaagctccgagcgaaaacccggaaaccccggtcgatgcaggatcatgtctggtcagatgagggtgtcaccttccaggagatcacagaagacccaaatgtggagccacctgacctgagtgtggacaggatgatgatgaggcagcaggtgagggacttcctggggatcctgagccccagggagaaggagatcatcgagcaccggttcgggatccacgatggcgagccgaagacgctacatgtcatcggggacatgtttgggctgtccaaggagaggatcaggcagctgcagaaccgggcgctggagaagctcaagaggagtgcatccttgcaggggtttgatgtctactttgatttgctaacctga</cdnaseq> |
| Protein Sequence |
<aaseq>MNSGGRSLLSSPLFASSSPAFRGGAAAASCSSSSSPSSSSRATV VPMVHDTGGGRASSTACHYSPSLVAAEPEEHVHGRSKDDDDDAAVSLMGEKALLELLL DMALEQHAPGKKLPAEEREESEFDIYLRDDKSHVLYHPEFSSTSVSSSPLSVKSSERS DLGTASAVLTKDVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLL ERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTA KEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCR EKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWW IRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIMEGEQPTNANVARRAGITIEK LAKLRAKTRKPRSMQDHVWSDEGVTFQEITEDPNVEPPDLSVDRMMMRQQVRDFLGIL SPREKEIIEHRFGIHDGEPKTLHVIGDMFGLSKERIRQLQNRALEKLKRSASLQGFDV YFDLLT</aaseq> |
| Gene Sequence |
<dnaseqindica>175..304#401..582#732..847#993..1145#1257..1533#1636..1869#1956..2096#2194..2391#2856..3143#acacttcacacgccccactcagctcagctgcatgctgctgagtggctgggtggggtagtgaaaaaaatcatcgcgcgcgcgacgaagcagcagcgacgtctcggtgagtgacggtgagctcgatccatccattcaagaacgtacgtaggtgcggcggcggaggcggcggagctgatgaattccggcggccggagcctcctctcgtccccgctcttcgccagctcttccccggccttccgcggcggcgccgccgccgcctcctgctcctcgtcttcctccccgtcctcctcctcccgcgccactggtatctatactatactaaatctctcttcttcttgatttgtgatgatatgatgtgaatgatcggcttagctctgaaacgagttttcgttctcgacagtggtgcccatggtgcacgacaccggcggcgggcgagcgtcgtcgacggcgtgccactactcgccgtcgctggtggcggcggagccggaggagcacgtccacggccgctccaaggacgacgacgacgacgccgccgtgtcgctcatgggcgagaaggccttgctggagctgctcctcgacatggttcgtcccaaatcatacagctgcttccaatcttgctgacgagccatctagttactttgcatgcatttcgatcaatggctccccctgttgttaatcggtgcttaattagtttcgtgtttgattgtttttttttcttctttcaaattaaggctttggaacaacacgcaccagggaagaagctaccagctgaagagagggaagagagtgagttcgacatctatctgagagatgataaaagccatgtcctttaccatccagaattcaggtacaggttcctatttcctctagcttccgtgtaattttgaagttcttgaacttcgatgtatctgttttgttttttcataaatgttcaggtgcaaattccttttctctgcttattctgatatcaactgatgagtcattcttggcagctctacatctgtgagttcttcaccattgtccgtaaaatctagcgaaagatcggatcttggtacagcttcagcggttctgacgaaggacgtggcattattagcagaagaaacagacattttagcaacccaactgaaagcatcgcaactttacaggtttgcctccttcattataggaactctatttgcaacattgacagtttatgttggcttgcagaattaccatgttctttgttctaatgcgtggcccgtgtgttttatgatcagtgtggattcgagcaagtcaaatgaagaactgcagagcaagggtcaggtgttcgttagatcgacgaggttactcgagaggagatccaagcggcgttatgctcctcgagcatcgatcgctgatgtttcctgcagcgctgacaattcgaagaagaaagagaaatcaaagaagtatggcagagttcttgaaccagatgagcctttcaagctgttcctaagagatcgggagacgacggaattcctgacagcaaaagaggagagacatttgttcagtaaaatacaggcaaagccttacttttaccctgtcatctttattttcagaactgctcaggtgaacattaattaattcagcatctctgattcaaagatgtgatgatcccatcagattcttatgaaaatagaggaggctcaccggaaactagaagttcaatgcggccgtgagccgacattggcagagtgggctgaggctgtagggatgagcagcaaggagctgcagtcctctattcgcaccggaagacggtgccgggagaagatggctcgatcgaacttcaggcttgtgattcatgtagctaggaagtatgaaggatatggtcttgacatccaggaccttgttcaggtttcatccattctcttggacctacatgtttctaaaacctatgccatgatgttttttcatgctgaaaatgtctctttaacttgtaggatggatgcagtgggttgatgaagacctttgagaagttcaatcccagcaaggggtgtcgattcccgacctacgcatattggtggatacgccaatcaattaagaagtcaatcttcaagaactcaagactaatccggttaccggtaagcacggaaacttaccatgacatctccatcccaacattcagaactgtttttttttttttctgaatgtgctttctgatgtacactttgcttgcaggagagtgtgtatgcgcttctgagaaaggtgggcaaggcaaggatggaatgcatcatggaaggggagcaacccaccaacgcgaacgtagcgaggcgcgccggcatcaccatcgagaagcttgcgaagctccgagcgaaaacccggaaaccccggtcgatgcaggatcatgtctggtcagatgagggtgtcaccttccaggtactaactaccattttacttcgtgccattgccatcttaattctgccaaagaactgcatttgcaatgcaacaactgaggcctggtttagttcccaaaatttttttcccaaaaacatcacatggaatctttggacatatgcatggagcattaaatataaataaaaacaaaaactaattgcacagtttgtatagaaatcacgagacgaatcttttgagcctaattagtctatgatagggtagataagtgctacagtaatccacatgtgctaatgacggcttaattaggctcaaaagattcgtctcgcggtttccaggtgagttacgaaattagttttttcattcgtatccaaaaaccccttcagacatccggtcaaacatccgatgtgacacccaaaaattttcttttcgtgaactaaacacaccctaaaccatctgaaaaactgtgagctgaaatggaactgcaggagatcacagaagacccaaatgtggagccacctgacctgagtgtggacaggatgatgatgaggcagcaggtgagggacttcctggggatcctgagccccagggagaaggagatcatcgagcaccggttcgggatccacgatggcgagccgaagacgctacatgtcatcggggacatgtttgggctgtccaaggagaggatcaggcagctgcagaaccgggcgctggagaagctcaagaggagtgcatccttgcaggggtttgatgtctactttgatttgctaacctgaagaagaaaggccaagcagctcatttggtttcagaaactttcagtcaagttgtccatacaaaacagcagaaacacatacacactgtagctttctagacctattatacatatatactacacacccagtgacacgtactgtacaagtatagtgctagatctgcagaaagaaatgtggtacacggattcagagtttcagatggcatccttttttgcttatgtaagtaaatttcccagcaagctgctgttggtgcttatactgatactgcaagtctgcaatgcaaagcaaccctcattgtaattaaggataatcatgtacatttttttacccttaatttgagctgatcaggcgctgtaattataacgg</dnaseqindica> |
| External Link(s) |
