Os08g0242900

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0242900| Description = Conserved hypothetical protein| Version = NM_001067879.1 GI:115475494 GeneID:4345045| Length = 4854 bp| Definition ...")
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Gene Name

Os08g0242900

Description

Conserved hypothetical protein

Version

NM_001067879.1 GI:115475494 GeneID:4345045

Length

4854 bp

Definition

Oryza sativa Japonica Group Os08g0242900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8680584..8685437

Sequence Coding Region

8680938..8680992,8681065..8681108,8681256..8681375,8681495..8681572,8681748..8681858
,8682112..8682189,8682281..8682346,8682445..8682522,8682603..8682665
,8682799..8682888,8682963..8683059,8684425..8684522,8684947..8685076
,8685214..8685272,8685360..8685389

Expression

GEO Profiles:Os08g0242900

Genome Context

<gbrowseImage1> name=NC_008401:8680584..8685437 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8680584..8685437 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgcctcctcgcgcttcgatctccgggcctcgtcgcacccgcaccagcacgccatcggaggcggaggcggaggcggaggcatgagtgacggtggcggtggcgcggcggcggcgttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcaccttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtatcgattgcgagaacgtgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtctaccaatgatctgcgtcagcgtatgcagtctgatatttctagattagaagccaagattgaaagaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggaggccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgagttccaaaaaatggttattggcaatcagcaagtacgtacccagcaaattcatgaaatgaagaaaaaagagaaagaatacatcaaattgcaggagaagttaaaccaggtattaatggagaaaaagaaggaatcatcacgttcaggaatggaaataatgaacttgttgcagaaagaaggacggcagcgtggaacttggagtggaaaaaagaatgacaatgattattacaaaatgattgttgatgcctatgaggtaaagaagcaagagttgatgcaagaaaatgctgatttgcgagcactattgcgttcgatgcagatggatatgcgcgagttcctcaatgctccaaatggagttccacagccagctgttgtgggcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaagacggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgcactaaaatggcttccataaaggcccgaatgacacaacttcaagatgcccaaaagggtgcagaagtgacatcagaagctaccgagcgggaacttgaacttgaagctcaactagttgaagctagaagcattatccaggagcaggcatccctcatgtccaagcactttacgaagtctgataaaccaaggaggttgagtggattggatgctgagcgtgaggcggttgcagctcaggaggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MSASSRFDLRASSHPHQHAIGGGGGGGGMSDGGGGAAAAFADAG NLEHCARYLNQTLVTFGFPASLDLFATDPVSIARTCNCIYALLQQRQRDIEFRESTND LRQRMQSDISRLEAKIERMDAQLAAKDRELATLTRTEAKNTATLKAQIDKLQQERDEF QKMVIGNQQVRTQQIHEMKKKEKEYIKLQEKLNQVLMEKKKESSRSGMEIMNLLQKEG RQRGTWSGKKNDNDYYKMIVDAYEVKKQELMQENADLRALLRSMQMDMREFLNAPNGV PQPAVVGNGRQEAGSPQSPLGGKTDVFDLPFHMARDQIEESLRTKMASIKARMTQLQD AQKGAEVTSEATERELELEAQLVEARSIIQEQASLMSKHFTKSDKPRRLSGLDAEREA VAAQEV</aaseq>

Gene Sequence

<dnaseqindica>4446..4500#4330..4373#4063..4182#3866..3943#3580..3690#3249..3326#3092..3157#2916..2993#2773..2835#2550..2639#2379..2475#916..1013#362..491#166..224#49..78#aaatccaatcctcctcctccagatctctccaccccacctccgcctcccatgtccgcctcctcgcgcttcgatctccgggtaaaccctaaccctagcctcctcgcagatccgcgcgctgcacccgctaacgatcggcctgtgacttcctcccccttggcaatgcaggcctcgtcgcacccgcaccagcacgccatcggaggcggaggcggaggcggaggcatgaggtgaggcgcgggcgatctcgtctcctccggggtttcggttttgtgcttttgcaccttggggtttttgaggttggggttggggtggcggtggctgatttggttggttggtttggtggtgtgtgatgtttgtgtcgcagtgacggtggcggtggcgcggcggcggcgttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcaccttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtagggttccttttcttcctcctctctctcccccctcctgatctactttgcggattttggttctgatttccctagtgccgtgagatttgtggggggtttatggcttcgtttttctcggcggtttgagtggcctcatttctcttcgttgtaatggacaatgtgttggttgtttctgatatttcgagcccgactagtttttactccacaagacccgttttctgtatcgaattttacgattcccaaacattttctgcttctcgtttagaaatctccgcgggctctctccgattttcctgtaaatttttgtttgataatgtttctattcggaaatataacatgttttttgggtgttaagtgagccagtcttaatgtaaaatcagccatgtgcttgtttacccaaacctttttcatttctgcacattaggtatcgattgcgagaacgtgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtctaccaatgatctgcgtcagcggtgagatgtttcccccctttaccatttactgcgtccatgtttaatggagttactcgaatgtgctcagttagtattagttaagaactgcacaccagatctggaggtttgcacggtttaccaatgcattaaagtgcatgatgccgactgataaagatagattggtaattgctaatgggggtgaaagatgatgttgttgttcttttttgggttaattagcaccaaagttttaagtcagtgttattaaacctgaaaaatgcctaatcgaggtaaactgtttgtgcgcatctgttatttttggtggagtacaaggtactgcaaaactaaagtatctcttttcctttttctatgagattttgtagtgctttccccatgtgcctgttcgttttgtgcatgttagcattggctctagtaacttgtttccttgtactaaaccccaaaaaattgcctgtatctactactcttagaataatgtatgtgagattaggctttatcacatctaatagtttgatttaagttagcacaagtttagtacctactgttcagcttttatagctttgtactgtctttgaatcttgattgcttgcctgataagttttgcctactgagtattttgttttttgccttcaaattgaaactacgtctgacaataataaaagactgtccttggcaacgtcccaccctaaaattctttcccctgacagtgccactctctggcatgaaccaatcctgtcagcacctaatatgtagccttttggttctttctccttccaataatggttccttttggctctgtaatttcttcttctccagcctcaacctgtgtggattgtaattgcaattactagtttgtctaatataacctgccgacaatgtgaattatgcattaagatattgtcatgtaattaggtgcacctaacaactaaatgttttgtccttttgtcatcattagttgcatctatgtagtacaatttgttcggatctattccttcacagtgttgatatgatataccttataaggcattatttgcttgccatctgtgttagtgttaggctcacgtgaacatacgtccccaatcggtttgttcattccaatgtatttacatgttcagttggtggaaaaactaatgaagttgatagctacatttttaaggccgtaactaattttttttccccagtttgttgtctacatgaacatcaatccgttacactctgattccataagtatgatctccatctagttgggtgacatcattaatgcaatggattgtagcatttaataatttttaaggttctaccaagtgttgcttacttaatcactgagatatatgtctaatggatacatgactcatagtttacaatgttcagtatgcagtctgatatttctagattagaagccaagattgaaagaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggttcgttcttctatcaattcttgtttgtattctttgccaatcttgaacttctatttatttcttctgaccaccaggaggccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgagttccaaaaaatggttattggcaatcaggtagaattgccatgccatagtcttatttttttagatcaatctgttcatcttgcttgcttactttgttttcggagaagttattaatgtgtatactgatgggaccaatatcttgctttctaattttctttttaagcaagtacgtacccagcaaattcatgaaatgaagaaaaaagagaaagaatacatcaaattgcaggtataattgttgtctttacaaatctacgtggtgattaaatacgagttattttcatagattgaccttcagctcttttgcaggagaagttaaaccaggtattaatggagaaaaagaaggaatcatcacgttcaggaatggaaataatgaacttgttgcaggtgctatacttttgaatgagctccatattaatagtcttaactctgaagtaactcttctatggaggccttctcattgacccttcagtttaattaaacagaaagaaggacggcagcgtggaacttggagtggaaaaaagaatgacaatgattattacaaaatgattgtaagtgactacgcgttatgttatacatctctctgatgcataccgtgtacctgattgaatatattgtaatttaccttgagtgaacattcaggttgatgcctatgaggtaaagaagcaagagttgatgcaagaaaatgctgatttgcgagcactattgcgttcgatgcaggtaaaaccataaaaggatgccacttccacatcatattattcctttcatgctagacaaatatacgctagccattccttagatctcagtggacaatggggaaagacaattttattttactacaacaattctcttttgcacatcctttgaaatgccattatttgataggtgaagaaaatgtagtgatatttgtggcaagcagcacataaggagtattgaaaagcgtacatttttgagtaataatgttttatcttagatggatatgcgcgagttcctcaatgctccaaatggagttccacagccagctgttgtgggcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaagacggtatgcattctcattcttcattacatagtttgctcttggtatctgtcttcttctaaaagtcttgatgatttttcttcatttatcaaataataataaaaaattttggtgtcgcatgacttcccctcagttggtcacatgatcaccatttgatttctttgcggttccctcctgccaggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgcactaaaatggcttccataaaggtagaatgactgaataagacaactcacctgacccctcatggttgatgctccagcatgcaaactttcatcattgattcactgtgctcctttcaactttgaaaaaacaaattactatgcaggcccgaatgacacaacttcaagatgcccaaaagggtgcagaagtgacatcagaagctaccgagcgggaacttgaacttgaagctcaactagttgaagctagaagcattatccaggagcaggtatgttgtctattaatctttccttgcattttctgaacggcaatgatgctgaacatggtaatcagtttatcacagttccagtttatagttgacatgcataaatggtagctgccttgactaacctacacttgggaaatgaatatgcaggcatccctcatgtccaagcactttacgaagtctgataaaccaaggtaatcttggtatttactttctttgatgtacagaccaaaactccaataatttccggattcttacaataacaggaggttgagtggattggatgctgagcgtgaggcggttgcagctcaggaggtgtaaattatgtttgtgtcgaccttcacaggcttcagctatccaaggcacgtcacgatgccaacctttcatcgaggtctcatgtgtttagtaaccaccaagcttcctccttggtaaacctgttgttgccatggtagcatgacttctaggcgttctctgtgtagtattatgtgcaggagcatctcctccgctgttgctaactgcctgcctctgactgttacatgtatcgcacttctactgttagggagaacagatcaatgtagctattatggcctacgaaataggcatcaataccttacttacagaattgttattcccttctttcaaatgtggagctagttgtggctgttgacctctggc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0242900, RefSeq:Os08g0242900