Os08g0244500

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0244500| Description = Similar to Beta-1,3-glucanase-like protein| Version = NM_001067886.1 GI:115475508 GeneID:4345052| Length = 2100 bp| ...")
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Gene Name

Os08g0244500

Description

Similar to Beta-1,3-glucanase-like protein

Version

NM_001067886.1 GI:115475508 GeneID:4345052

Length

2100 bp

Definition

Oryza sativa Japonica Group Os08g0244500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8836259..8838358

Sequence Coding Region

8836259..8836331,8836435..8837736,8837849..8838103,8838255..8838358

Expression

GEO Profiles:Os08g0244500

Genome Context

<gbrowseImage1> name=NC_008401:8836259..8838358 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8836259..8838358 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtactcactcacctcctctgctccctcctccttgccaccgcattgctgctgctctccatctcccgtacagatgcgggcgagatcggggtgtgctacgggagggacgcaaaggacctgatcgacccaccggcggcggtgagccttctgaaggcgaacggcatctccgcggtgaggatcttcgacgcggacccgacggtgctggccgcgatggcgaacaccggcatcaaggtgatggtggcgatacccaacgccgacctggctgccgccggccaggacctgcgcagcgcgaccgactgggtggcgagcaacgtggcgccgtaccgcagccggggcacgctgatcagcggcgtcgccgtcgggaacgaggtgttcaggcagaggcccgagctgaccggggcgctcgtctcggccatgcgaaacgtgcacagggcgctggagaacctgaacctggcgaacgacgtgaaggtgtccacgccgattgccttcgatgcgctcaagcagtcgtcccctccatctgcgggggagtttaaggatgagatcgcgcaatcggtgatgaagcccatgatcgacttcttgaaacagaccggctcgttcttcatggtcaatctctacccgtacttcgcgtacgtggctcagccggacaagatctctctcgagttcgcgacgttccgccctaatgctggtgtgctcgatggcaataccgacatcaggtacttcagcctctttgatgctcagctcgacgctgtttacgccgcgataaacagggtttctggtggtagcttaacggtctcaatggctcgacgagatggaatccttagtgtgcaagcttcggaatcagggcacccctctggaggtagatttcccctatcttccatgctagctgcagccgatacggactcggtggccacgatagccaacgcccaagcgtacaacaatgggcttatcagacgtgttgtatccggagcctccggtatgcgtgacgtctccgcctacattttctctcttttcaatgaaaacgagaagcctggaccaaccatagagagaaactttggcttgttctacccaaatggtcagaaggtgtatgaggttgactttcggggcggtggcggtggcggagcttgtcctacaaagacgagttggtgtgtggcgagagcagatgttgggagtgcagcattgcagtcagcgttggactttgcgtgcggtaacggcgcggactgcagcgctatccaacagggcagtgtgtgttttgagccaaacaccttggtcgcacatgcatcgtacgcattcaatgactactaccaacgcaagggccaggctagcggcacttgcgacttctctggcgccgcttccatcgtattcaagccatcaccaagcatatgtgatccgaacccaagttggtgtgttgcgaaatcggaggtcggggacgcacggctgcaaaatgcactagactatgcatgtggtagctgtgcggactgcagcgccattcaaccaggtgcacagtgctttgatcctgacactaaggtggcacacgcgacctatgcattcaacaatttttaccagaccaccggtcgggctagcggatcgtgtgactttgcgggtgctgcttctattgtcaaccagcaaccaaaaataggaaactgcgtgctcccaccaaacaatgcttggacgacagaacaaactgcaattgaagatcaatcgactgcaaacttaccagcaacagcttggcagtga</cdnaseq>

Protein Sequence

<aaseq>MVLTHLLCSLLLATALLLLSISRTDAGEIGVCYGRDAKDLIDPP AAVSLLKANGISAVRIFDADPTVLAAMANTGIKVMVAIPNADLAAAGQDLRSATDWVA SNVAPYRSRGTLISGVAVGNEVFRQRPELTGALVSAMRNVHRALENLNLANDVKVSTP IAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSFFMVNLYPYFAYVAQPDKIS LEFATFRPNAGVLDGNTDIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQ ASESGHPSGGRFPLSSMLAAADTDSVATIANAQAYNNGLIRRVVSGASGMRDVSAYIF SLFNENEKPGPTIERNFGLFYPNGQKVYEVDFRGGGGGGACPTKTSWCVARADVGSAA LQSALDFACGNGADCSAIQQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCDFSGAA SIVFKPSPSICDPNPSWCVAKSEVGDARLQNALDYACGSCADCSAIQPGAQCFDPDTK VAHATYAFNNFYQTTGRASGSCDFAGAASIVNQQPKIGNCVLPPNNAWTTEQTAIEDQ STANLPATAWQ</aaseq>

Gene Sequence

<dnaseqindica>1..73#177..1478#1591..1845#1997..2100#atggtactcactcacctcctctgctccctcctccttgccaccgcattgctgctgctctccatctcccgtacaggtaaccatggcaaacgtagaaacgctttcgattttggactagtagtagctgatcgatcggcaacgccaaacgatgctaaaattccttttgctcgtcaatgcagatgcgggcgagatcggggtgtgctacgggagggacgcaaaggacctgatcgacccaccggcggcggtgagccttctgaaggcgaacggcatctccgcggtgaggatcttcgacgcggacccgacggtgctggccgcgatggcgaacaccggcatcaaggtgatggtggcgatacccaacgccgacctggctgccgccggccaggacctgcgcagcgcgaccgactgggtggcgagcaacgtggcgccgtaccgcagccggggcacgctgatcagcggcgtcgccgtcgggaacgaggtgttcaggcagaggcccgagctgaccggggcgctcgtctcggccatgcgaaacgtgcacagggcgctggagaacctgaacctggcgaacgacgtgaaggtgtccacgccgattgccttcgatgcgctcaagcagtcgtcccctccatctgcgggggagtttaaggatgagatcgcgcaatcggtgatgaagcccatgatcgacttcttgaaacagaccggctcgttcttcatggtcaatctctacccgtacttcgcgtacgtggctcagccggacaagatctctctcgagttcgcgacgttccgccctaatgctggtgtgctcgatggcaataccgacatcaggtacttcagcctctttgatgctcagctcgacgctgtttacgccgcgataaacagggtttctggtggtagcttaacggtctcaatggctcgacgagatggaatccttagtgtgcaagcttcggaatcagggcacccctctggaggtagatttcccctatcttccatgctagctgcagccgatacggactcggtggccacgatagccaacgcccaagcgtacaacaatgggcttatcagacgtgttgtatccggagcctccggtatgcgtgacgtctccgcctacattttctctcttttcaatgaaaacgagaagcctggaccaaccatagagagaaactttggcttgttctacccaaatggtcagaaggtgtatgaggttgactttcggggcggtggcggtggcggagcttgtcctacaaagacgagttggtgtgtggcgagagcagatgttgggagtgcagcattgcagtcagcgttggactttgcgtgcggtaacggcgcggactgcagcgctatccaacagggcagtgtgtgttttgagccaaacaccttggtcgcacatgcatcgtacgcattcaatgactactaccaacgcaagggccaggctagcggcacttgcgacttctctggcgccgcttccatcgtattcaagccatcaccaagtaatgttttgctctcaatctttaagatcaatgaggttttcgcaaatgtgcattcatatcttgattccatctcattgtttatttgttttgtgaattgtttcccgaaatataggcatatgtgatccgaacccaagttggtgtgttgcgaaatcggaggtcggggacgcacggctgcaaaatgcactagactatgcatgtggtagctgtgcggactgcagcgccattcaaccaggtgcacagtgctttgatcctgacactaaggtggcacacgcgacctatgcattcaacaatttttaccagaccaccggtcgggctagcggatcgtgtgactttgcgggtgctgcttctattgtcaaccagcaaccaagtgagttttctctcattttactgtgcatgatatatatgccctactgctactaatgtacatattaattccttaggaaaaattgcacacttctgtttcaagtagtaaaagaagtaaatggttatcttattagtgcttgttcaataatttacagaaataggaaactgcgtgctcccaccaaacaatgcttggacgacagaacaaactgcaattgaagatcaatcgactgcaaacttaccagcaacagcttggcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0244500, RefSeq:Os08g0244500