Os08g0249000

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0249000| Description = Zinc finger, B-box domain containing protein| Version = NM_001067904.1 GI:115475544 GeneID:4345073| Length = 1394 bp...")
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Gene Name

Os08g0249000

Description

Zinc finger, B-box domain containing protein

Version

NM_001067904.1 GI:115475544 GeneID:4345073

Length

1394 bp

Definition

Oryza sativa Japonica Group Os08g0249000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9097489..9098882

Sequence Coding Region

9097610..9097950,9098320..9098521

Expression

GEO Profiles:Os08g0249000

Genome Context

<gbrowseImage1> name=NC_008401:9097489..9098882 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9097489..9098882 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcaagcgacggcagcgcgagcccggccagctgcggcggcgcggcgtgcggggtgtgcggcggcgcggcgacggtgtactgcgcggcggacgcggcggcgctctgcgtgccgtgcgacgccgcggtgcacgcggccaacccgctggcgtcgcgccacgaccgcgtgccgctcgcggtcgccatggcggcggcgagctccggggtgtacgaccacctgttcgcgcccgacgacgacgccgcctcgtcatgggctgccgccgcggcggcgggggcggcggtgcaggggcaggggcaggggagccccaacgacagctcgtcgagcttcaccaacgacagcgccgccgcctcctcgtcatcggacgacgacagcacggccgccgccggagtcagcggcgccggcggcgccggcgccgccgccacgaaggaggccaagttctggctctccttctccgacgacggccgcgccgacggcgtagggttctacatggacagcaccaccgctgccaccgcggcctacggcgtcgtgccaaccttctag</cdnaseq>

Protein Sequence

<aaseq>MMASDGSASPASCGGAACGVCGGAATVYCAADAAALCVPCDAAV HAANPLASRHDRVPLAVAMAAASSGVYDHLFAPDDDAASSWAAAAAAGAAVQGQGQGS PNDSSSSFTNDSAAASSSSDDDSTAAAGVSGAGGAGAAATKEAKFWLSFSDDGRADGV GFYMDSTTAATAAYGVVPTF</aaseq>

Gene Sequence

<dnaseqindica>122..462#832..1033#acaaacacacacaatttagcttagcttaagccacttgatctcaagctcaagcttaaaattagcttaagattaagccattaattagccaagctaactaagcaagcaagatcttgttgaggagatgatggcaagcgacggcagcgcgagcccggccagctgcggcggcgcggcgtgcggggtgtgcggcggcgcggcgacggtgtactgcgcggcggacgcggcggcgctctgcgtgccgtgcgacgccgcggtgcacgcggccaacccgctggcgtcgcgccacgaccgcgtgccgctcgcggtcgccatggcggcggcgagctccggggtgtacgaccacctgttcgcgcccgacgacgacgccgcctcgtcatgggctgccgccgcggcggcgggggcggcggtgcaggggcaggggcaggggagccccaacgacagctcgtcgagcttcaccaacgacagcgccggcggcggcggcggcggcggcgccgagaggagcctctttgacctgctctccgacgtcgacatcatgtcctgcggcggcggcggcctcgcgtcgtcgttcgacggcgccgccgcgccgccgctgtggctgcacccaggccagctcgccgcgttgacgccgtggtcaccggccgactccgtcgtcgtcccgacctcggcggccggcgcggtcgccgcggcggcggcggcgagggaggagagggtgaggcgctaccgggagaagcgcaagaaccgcaagttccagaagaccatccgctacgcctcacgcaaggcctacgccgaggcgcggccgaggatcaagggccgcttcgtcaagcgcgccaccaccgccgccgcctcctcgtcatcggacgacgacagcacggccgccgccggagtcagcggcgccggcggcgccggcgccgccgccacgaaggaggccaagttctggctctccttctccgacgacggccgcgccgacggcgtagggttctacatggacagcaccaccgctgccaccgcggcctacggcgtcgtgccaaccttctagaaagttccagaaacccctctcccaatgggcgccaacgcggcaacggcaatggcgtttgcccgtcttaagacaaacattaagaaaagggcaacatgtcataatctcgccgtcatgctaatggtggcgcatggtgttcatgtcgtcgtcttcttcgccgtcgctttctgattccgtggtggaaacccgcatcactatttttaactgctgatgcgggttttcggtgggtggaattccaaattccatcggttaaaattagggggattattattaatgcattgtgacttttgtaagataactcatgtagttaatttctatggttcagtgctgaaataataaaaaaaatccaatgtgatttttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0249000, RefSeq:Os08g0249000