Os08g0249600

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0249600| Description = Similar to Diacylglycerol kinase-like protein| Version = NM_001067907.1 GI:115475550 GeneID:4345076| Length = 6930 b...")
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Gene Name

Os08g0249600

Description

Similar to Diacylglycerol kinase-like protein

Version

NM_001067907.1 GI:115475550 GeneID:4345076

Length

6930 bp

Definition

Oryza sativa Japonica Group Os08g0249600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9128820..9135749

Sequence Coding Region

9128820..9128936,9129881..9129963,9130524..9130599,9130988..9131087,9131343..9131411
,9131469..9131554,9131640..9131777,9132035..9132157,9133477..9135066
,9135276..9135749

Expression

GEO Profiles:Os08g0249600

Genome Context

<gbrowseImage1> name=NC_008401:9128820..9135749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9128820..9135749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcggcgtcggagcagccgcgcggggaccaggtgtggtcgtcgtcgtcgccgccgcggtcgtcgacgcctcccccgcagccgctcgtggggggcctgatcgagtcgctctcgttccggagctgcgggttcggccgcgccgccgtctccgcgttcgagaaggaggacctccgcgcccgcgccgcgctgccgcagcggctccgggccgcggtccacgcggcgctgcgtgccaaggacccctccgcgggggcgttcgcctacgtcgccggcaacgcggctgcccggggtgggcgaggaggcggcggcagcggcggcggccgcgaggtgtcggcggccaacccgtggttcgaggtcgcccacgacgacgcccccgagtcccccctcgtcgcgttcgtcaacccccgcagcggcggccgcctcggccccgtcctcaaaacccgcctccaggagctcatcggcgaagaccaggcggcgctggtcacgtcggggtggctgcggcggagtgccgacctccacaacgcgctcatccgggcgctcgcggggtccgcgcgcccgcacctcgcgctcccgctctacgcgcacctcctccgcgcgggccaccaccccaccccgcacaccctcccctccctcctcaagtcgctcgcgctctcccccgccgtccccggcgcgcggggcctcgcgctcgccgtccacgcccacgccgtcaagctcggcctcgcggggttcctcctcgtgagcaacgcgctcatccgcgtccacgcgggcatcctcggccggctctccgacgccctcgtgctgcttcgcaccgcggcttccgtcgacgcctccacgttcaacacgctcatcacggcctacgcgagggccggccgggtcaccgacgcccgcgcgctgttcgacgaaatgcctgcgaggaatgctgtgtcgtggagcgccatggtgaatggctacgtgcaggctggggacgggagggaggcgctggggttgttcgcacggatgcaggccgatggtgtccgcccggatgacacggtccttgtcggtgtgctcgcggcatgcgcgcagcttggcgtgctggagcagggcaaatgggtacatggttacctcaaggcaaataacattaggatcaccgtgtttttgggcactgcattagttgacatgtatgccaaatgtggtgagatgcagctcgccatggaggtgttcaaggtgatgaaggaaaagaatgtgctggcttggaccactatgataaaaggcctggcaatgcatggtcgaggatcggaggcattggagttattctcccagatggagagattaggtgtgaagccagatgacattgccttcattggtgcattgtgcgcatgcacacacactgggttggttgacaaggggcgggagctttttgattctatggtgaggaagtatggtatcaaaccgaagatcgagcattatggatgcatggtggaccttctggcacgaaatggcttgctcaacgaagccagagagatggttgagaaaatgcccatgaaacctgatgccttgatctggggtgctttgatggctggctgtaggtttcataagaatgttgagttggctgagtatgttgtcaagcattggattgaactggagcctgataaaagtggcgcttatgtgcttctgggtaacatatatgctgcctctggtaggcatgcttctgcaagggaaattaggcacctaatgcgtgagaagggagttgataagacaccaggatgcagcactgtggagattaaaggagttattcaccaattcattgttggagatctgtcccatccttttatagaagagattttgtctaaatgggatgagattgatagtaggataaggttggaggaaggttatgtgcctgataagaaggaagttctgcttgatattgaagaagaagagaaggaaaatgcactcagccgtcatagtgagaagatggcaattgcatttgctttgattaacacaagtgatgatatgcccattcggatagtcaagaacctcagagtttgccatgattgccatcatgtcaccaaacttatatctaaagtttttgatcttactgttgtgaagccttctgactttgtgcaatatgttttgggttgcttggaacaacttgctgacgctggtgatcacagtgcaaagtccattcgccataatctaagagtcatggttgcaggaggtgatggtacagtaggttgggtgttgggatgtttaggagacctttatgttcagaacagggaaccaattcctccagttgctgttataccacttgggacaggaaatgatctttccaggagttttggctggggtgcttcatttcctttcggatggaaagcagctgctaaacgatctctgtacaaagctatttttggttcagtttcttgtttagacagtttgatgatgatacatcagtatttttgttatgttaagaaaccttatttgagctggttaagtccgcatagttggcatattgttgtttctatgccagaacgaggagatgaagaggaagaactggattttcctcactcccttaggaatcttggagagtgtaccttttatgatgacggcactgctgaaggggagttgcctgaaacagtttcttgctttgatggcgtattctataattacttcagcataggtatggatgctcaagtggcgtatggatttcaccatctacgggatgaaaagccattccttgctagtggtcctttatctaataagttaatttacgcagggtatacctgcaagcagggatggttttttacacaatgtgtcagcgaccctgaactgaggtgctgtatcccccctcgatttagtttaaggcatacttatgtttga</cdnaseq>

Protein Sequence

<aaseq>MSSSASEQPRGDQVWSSSSPPRSSTPPPQPLVGGLIESLSFRSC GFGRAAVSAFEKEDLRARAALPQRLRAAVHAALRAKDPSAGAFAYVAGNAAARGGRGG GGSGGGREVSAANPWFEVAHDDAPESPLVAFVNPRSGGRLGPVLKTRLQELIGEDQAA LVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLAL SPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVD ASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARM QADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCG EMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGA LCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPM KPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAR EIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEG YVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCHHV TKLISKVFDLTVVKPSDFVQYVLGCLEQLADAGDHSAKSIRHNLRVMVAGGDGTVGWV LGCLGDLYVQNREPIPPVAVIPLGTGNDLSRSFGWGASFPFGWKAAAKRSLYKAIFGS VSCLDSLMMIHQYFCYVKKPYLSWLSPHSWHIVVSMPERGDEEEELDFPHSLRNLGEC TFYDDGTAEGELPETVSCFDGVFYNYFSIGMDAQVAYGFHHLRDEKPFLASGPLSNKL IYAGYTCKQGWFFTQCVSDPELRCCIPPRFSLRHTYV</aaseq>

Gene Sequence

<dnaseqindica>6814..6930#5787..5869#5151..5226#4663..4762#4339..4407#4196..4281#3973..4110#3593..3715#684..2273#1..474#atgtcgtcgtcggcgtcggagcagccgcgcggggaccaggtgtggtcgtcgtcgtcgccgccgcggtcgtcgacgcctcccccgcagccgctcgtggggggcctgatcgagtcgctctcgttccggagctgcgggttcggccgcgccgccgtctccgcgttcgagaaggaggacctccgcgcccgcgccgcgctgccgcagcggctccgggccgcggtccacgcggcgctgcgtgccaaggacccctccgcgggggcgttcgcctacgtcgccggcaacgcggctgcccggggtgggcgaggaggcggcggcagcggcggcggccgcgaggtgtcggcggccaacccgtggttcgaggtcgcccacgacgacgcccccgagtcccccctcgtcgcgttcgtcaacccccgcagcggcggccgcctcggccccgtcctcaaaacccgcctccaggagctcatcggcgaagaccaggtcaacacctcctctctctctctctctctctctctctctctctctctctctctctcatatattttgttgcgtggcatgatgtgcgggtgaggcattttgtcgagcggttggagagcacgacgtgaggtgatgagatggtcggcgtcgggcgttacgtcgatctgctgtcgcggtgcggcggcgacgcgcgcgcggtcgcgcggatccaggcggcgctggtcacgtcggggtggctgcggcggagtgccgacctccacaacgcgctcatccgggcgctcgcggggtccgcgcgcccgcacctcgcgctcccgctctacgcgcacctcctccgcgcgggccaccaccccaccccgcacaccctcccctccctcctcaagtcgctcgcgctctcccccgccgtccccggcgcgcggggcctcgcgctcgccgtccacgcccacgccgtcaagctcggcctcgcggggttcctcctcgtgagcaacgcgctcatccgcgtccacgcgggcatcctcggccggctctccgacgccctcgtgctgcttcgcaccgcggcttccgtcgacgcctccacgttcaacacgctcatcacggcctacgcgagggccggccgggtcaccgacgcccgcgcgctgttcgacgaaatgcctgcgaggaatgctgtgtcgtggagcgccatggtgaatggctacgtgcaggctggggacgggagggaggcgctggggttgttcgcacggatgcaggccgatggtgtccgcccggatgacacggtccttgtcggtgtgctcgcggcatgcgcgcagcttggcgtgctggagcagggcaaatgggtacatggttacctcaaggcaaataacattaggatcaccgtgtttttgggcactgcattagttgacatgtatgccaaatgtggtgagatgcagctcgccatggaggtgttcaaggtgatgaaggaaaagaatgtgctggcttggaccactatgataaaaggcctggcaatgcatggtcgaggatcggaggcattggagttattctcccagatggagagattaggtgtgaagccagatgacattgccttcattggtgcattgtgcgcatgcacacacactgggttggttgacaaggggcgggagctttttgattctatggtgaggaagtatggtatcaaaccgaagatcgagcattatggatgcatggtggaccttctggcacgaaatggcttgctcaacgaagccagagagatggttgagaaaatgcccatgaaacctgatgccttgatctggggtgctttgatggctggctgtaggtttcataagaatgttgagttggctgagtatgttgtcaagcattggattgaactggagcctgataaaagtggcgcttatgtgcttctgggtaacatatatgctgcctctggtaggcatgcttctgcaagggaaattaggcacctaatgcgtgagaagggagttgataagacaccaggatgcagcactgtggagattaaaggagttattcaccaattcattgttggagatctgtcccatccttttatagaagagattttgtctaaatgggatgagattgatagtaggataaggttggaggaaggttatgtgcctgataagaaggaagttctgcttgatattgaagaagaagagaaggaaaatgcactcagccgtcatagtgagaagatggcaattgcatttgctttgattaacacaagtgatgatatgcccattcggatagtcaagaacctcagagtttgccatgattgccatcatgtcaccaaacttatatctaaagtatatggtagagaaattattgttagagatcgaacacgattccatttgttcaaagatggcagttgttcgtgcaaggactattggtagtaattaacagatctgtagaataacatcagtacttgattcatgaagtagttcagtcaccaaatgaaaaaaaaaaatctctttcatcttgaagtatacatcaggggtcatgaatgaagaatgtcaaggtgattaaggaataaaactccctgctagttctaatctgcatatgtagtcaggctgccactaagctaatttccatggatattattgttcatctttggtattgaggtgattgttccagaacaataatataattctgcactggtagcatgccaaatccaattgtgaaccaagcatactgcattttttaaatctatcatgatgtatgaatctggtacattagtctagatatgctattgttccattgttatcacgcttatacaaaatagcactacaaacaaaatatgggttgatatcgaatacgaaatgctagggaaacacatggttgaaccctatggaatagagtagaacagttaatttacttgtgttggcatgagaaatttggatacgatgcagggcacataagcataatgagtgcatggaatactttcatgtccaacagttttccaaccaaggaaaagtgtaatagttagtcgtagtcctcaacttacgcaaatgctggaaagattctgatgatccatagtcccatgcaaaacaaatgcattgctttagccttttctgatatgctctgaactttcactaaattagtttatctcatactagtctgaattggctttacttcatacacttttatttactgtcatttaacatccattcttgtaagcaaatataatcatttttagttaactacactaaaaacatatatgaaaatgcagaatggtaggatatcgcttaaactacaaattcatcactggccataaataaatattgaagtaggtaactgtaccggctaattgaccaaatcccactttattgatggttcagttccaactaaattgttgctctgcttcggttaaatgcccttgaattatttctgcaaaagaactaaaatgggtcaattggacacctcaacccaaatcacttgatttcctatagatacttgctctgttaaagaaagtttgagcacgccaaatcacttgctttcctattcttgttctgttaaataaagtttgagcatcatacaatatcttcaattattgggactgctgttcttgaaaaattaaaatgattaaggaataactgctttgttattaacaaccttttgtcagcaggtttttgatcttactgttgtgaagccttctgactttgtgcaatatgttttgggttgcttggaacaacttgctgacgctggtgatcacagtgcaaagtccattcgccataatctaagagtcatggtatgtatgcattttcgtagcttccatagctgtaaagaacacatcattattattctgtgtttttcctgagttgctgaatactaatcacatcatctcttatttttgtcattgttgtagtttcacaaaggtactaaattgtaaaaatgtttttatttttgttctttcgtatgatggaaaacctgtactagtcagcagaaccgttctcatattccaaaagtttcagaattctaaatacttacagtttgtaacctacctaggttgcaggaggtgatggtacagtaggttgggtgttgggatgtttaggagacctttatgttcagaacagggaaccaattcctccagttgctgttataccacttgggacaggaaatgatctttccaggagttttggctgggtaaaacgatctctttcttgcactctttccgtcttcctatgaagctacttactgcaagttttcatgacctcacagttattttcagggtgcttcatttcctttcggatggaaagcagctgctaaacgatctctgtacaaagctatttttggttcagtttcttgtttagacaggtgacttctttactttgttggccagttattttaatcttctgtgcattctggttgcagtttgatgatgatacatcagtatttttgttatgttaagaaaccttatttgagctggttaagtccgcataggtatcactttttcgcaataccatggtcccagcaatgtactcctctatttccaaatatatgtaattttagacactaacatgatcccaaacatacatcggaccattacctttttttctaattacgcgttagtacttgtttattcagcgtattgtcccaatatttctgcatttatgaccaagttcctccttcaacatgtaatactcacgtccccagtataaccacttccagttgctgattaattagttatttctgcagttggcatattgttgtttctatgccagaacgaggagatgaagaggaagaactggattttcctcactcccttaggaatcttggagagtgtaccttttatgatgtaattattttctactatcttatatattgaaatgttgtacaaatgcattggaagtctaccccgtgtacattttatatcgtactccctctggtcataaatatgacatgcacgataagatttggtaaaacttgtgaaactttgaccattaattttatgagaataagtttatgatattatgatagtatttttcaaggcaaatctatgatatcatattttggttttaaactaagcattatatatattatagatggtcaaattttaaaacttttaaccatatattttcctaaatgccaaatatttatgactagaggagcaattatttttatactatcttcttcaagtgttgtacaaatgcattctgcttgattaatacaagtctaccctgcaggacggcactgctgaaggggagttgcctgaaacagtttcttgctttgatggcgtattctataattacttcagcataggtacaatttttacatgataacttatagttgtgttcattattcaatagtgtgtttatagtgtattccaaagtcctagatatactcttggccacacataaataatttgtattgtcatattctacatttctaagcatctattatggtttcatatgatgcatctcatcaagggaaagtatcttcaagaccattgtgctttgtcacttatgctaataaccttgtaactaggtgttcgaaaaattctcctttggttattacattctcataaagtttttaatctacgatgtatgtttgtattgtttgttgtgatgttctttatgcttattttggttctataataaacaaaattaatgcacattgtagcactacaattggaataatgagatgaattatatctcagttatttgtcaccccttacattcattatcagtgtcagagaaagctaccatagaagttatctacggtgtggctttctttgttgttactatatgttgtcattttcaatatgcatattacatatgttctgaagggaccttgaggatgcaaattctgttgtaatgcaggtatggatgctcaagtggcgtatggatttcaccatctacgggatgaaaagccattccttgctagtggtcctttatctaataaggtatgcactcagggatgagatttccatcatttatggcaattcaaaagcttctcagcccaaactcctgatattgaattagcatgtgctcattatctgtctcctgttctttgtataatcataaagttgacccttgaatgggatcaagattgccgtctatagacgcaatgttaaatggtacaaattatttaaaagaaaagataaggggaggacagctgaagaacagtgggcccattatattaatgaattgttttcttttgggtatccagtgtattttctgctagctaaaagcaattcctgacaagaccagcttgtactgtgagtctgtgactgattaacaagaagaatgtccgtgcaggaggggcgtataggagactggcaagggacacaggggaataggagattggataactttttccttttctttaaactattgaataggagcatcgccctaaatgagaggccctaataaataaaattttaagtacaaagacaatgaaccataataaatataaatatatcatggatgatacattaaatggcttcaatcctaagcaaagggtttcaattgggatgtaattggaacgtggtgtgctgcttctgacttccacatgccggccgtaggtctggccgcacatgacattacctttttcaacacttatcgcaactcgcaagctattaattttgatctgatgtaagtaacataggcttccacatattctcactgtaaacatatatacatcaaatagggtttgatacatgggttgaagcacgttatttattgaatgatggttcttataagttctaattgtcagttgatcgggtacataattgacgtttgaactttgtcatgataagccttctgttctgttgatgaatatgataaataatatttcaacagtgaattttttgctaactaaattactgattggctgattttatgacagttaatttacgcagggtatacctgcaagcagggatggttttttacacaatgtgtcagcgaccctgaactgaggtgctgtatcccccctcgatttagtttaaggcatacttatgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0249600, RefSeq:Os08g0249600