Os08g0260800

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0260800| Description = Similar to Hv1LRR2| Version = NM_001067926.2 GI:297608289 GeneID:4345107| Length = 3609 bp| Definition = Oryza sati...")
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Gene Name

Os08g0260800

Description

Similar to Hv1LRR2

Version

NM_001067926.2 GI:297608289 GeneID:4345107

Length

3609 bp

Definition

Oryza sativa Japonica Group Os08g0260800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9793977..9797585

Sequence Coding Region

9793977..9794044,9794814..9795662,9795774..9796188,9796329..9797585

Expression

GEO Profiles:Os08g0260800

Genome Context

<gbrowseImage1> name=NC_008401:9793977..9797585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9793977..9797585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgaggccgtgattctttttgctgtgaggaagatcggtgttgcattgggaaatgaagcaaccagccaggctgtttcgtatttcaggaagtttgtcacgcagctaacagagcttcaaggcagcatgggccgcatcaggagggagctccggttgatgcatgagtttctctgtcgaatggatgtacgcaaccgtaataaccagacatatgaaatctgggtggaggagggacgagtacttgtacatgggatcgaagacattgtggacgaatatttgcatcttatcggtcagaagcttgacactggatggagcacctatctgaagaaaggaatcaagggacccaatgtcgtggtatccctgaacaggatagcttcattggttaaagaagccgaggtcaatctggtgcacctgtttcaggccaaggaccgatgggttttgcttccaagtgacagtaacgacaactcaagctacattgtcgagagatctcagcatttggcagccacttcatgttccatcagtgatgaagatcttgtggggattgatgattacaggagggatttggaaaagtggcttgaagatgatgaacctgcacaccttgtgatagccctgcttgggatgggagggcttggcaaaacagcccttgctgcaaatatctacaggagggcgaaggaaaagtttgaatgccatgcctgggtatccatctctcaaacatattcaagacaaggtgttttgagaaatttaattgggaagcttttcaaagatatagaggacgtaccaactgacattgccacgatggacatcacatcccttgaagagaaactgcatctttttctagtggagaagaaatacttgatcgtactagatgatgtttggagtacagaagcattcactgacttgtctaatgcacttgttcataacggcactggaagcaggcttgtaattacaacacgagacagtgaagtagccggccttgcttctaagaattatgtcgttgaactgaaaactttaccaagtgacaaggcaatggagttgttctgtaaaaaggccttccggagtgatacagatgacaaatgtcttgcaaagctaaatgatatttccgtggaaatcgtcagcaagtgcaaaggcttgcctcttgctattgtctctgttggtagtctcttgtttgtgcgtgagaaaaccacggaagaatggaaacggattaatgatcagctcagctgggagataatcaacaatccaaggctagatcatgtcaggaatggtgaaagcacactagaggaagtggcagaaggctacctaaaagagttggttcacaggaacatgctgcaactggtccaaaagaactcatttggtaggataagaagattcaaaatgcacgatatcgtgcgtgagctcgcggttgacttgtgtcggagagaatgttttggcattacatatgaggatggtcatcatgggagatcccttgaggaaaatgatgaacgtcgactggtaatacaaaaattccacgaggacgttggtcagtcggttttaggtgtgtaccggctccgctctatcattgtcctggataagagcactccatcatccattattttatcctctgtgttggacaactccaggtacatgtccgtgcttgagctaagtggagtacccatcaagacagttcccaatgctattgacatacggtgtctgccaagaaggatcgtcaagctgaagaagcttaggcacttatttgccgagaaactgcacgatgcaacctggagaaatttccgttgctgcactggtgtgcgcttccacaagggtctcggtaacctgacgagccttcggacgctacatgggctggaggcacaggaggagtccatcaggcatctcggagagctgaggcagctacgaagcctcagagtatggaacgtgaaaggagcctacagtggacgcctttgcacatctcttgttaagctacaattcctgtccaacctgtacattgtggcgagcaacgaaaacgaggctctccagctggaagagatgaacccgccgcctcccaaccttcagaggctgttcttgcgagggcggctagcagatgatatactgcaggaggagtctcccctcttccatcacgcagcaaggcgaaacctgtatgagctacggctgtattggtcccaattggaacaagaccctctgccatccctctccctgctgttgaatctgacagacctgaggctaaccaacacatacattggagagaggctggtgtttctttctgagtggtttcccaaccttaggatactcttcttaagagacatgcgtaatctgaaatggctggtggttcaaaaagacgccatgaagaaactgcaacggctaacactggttaacctcaaaaacatgagggacgtcccgttgggcattcagttcctcatgcccctgaaatatctaggctttctggaaatcaccaaggaattccttgagttattgcagtcctcttcgattaaagattttcggtggcagcattctcttcgagactctgagaccagttgcatcaagaccataactggtcgcgcttgcaaaaatcagactgcatttttgcatatggctccttga</cdnaseq>

Protein Sequence

<aaseq>MAEAVILFAVRKIGVALGNEATSQAVSYFRKFVTQLTELQGSMG RIRRELRLMHEFLCRMDVRNRNNQTYEIWVEEGRVLVHGIEDIVDEYLHLIGQKLDTG WSTYLKKGIKGPNVVVSLNRIASLVKEAEVNLVHLFQAKDRWVLLPSDSNDNSSYIVE RSQHLAATSCSISDEDLVGIDDYRRDLEKWLEDDEPAHLVIALLGMGGLGKTALAANI YRRAKEKFECHAWVSISQTYSRQGVLRNLIGKLFKDIEDVPTDIATMDITSLEEKLHL FLVEKKYLIVLDDVWSTEAFTDLSNALVHNGTGSRLVITTRDSEVAGLASKNYVVELK TLPSDKAMELFCKKAFRSDTDDKCLAKLNDISVEIVSKCKGLPLAIVSVGSLLFVREK TTEEWKRINDQLSWEIINNPRLDHVRNGESTLEEVAEGYLKELVHRNMLQLVQKNSFG RIRRFKMHDIVRELAVDLCRRECFGITYEDGHHGRSLEENDERRLVIQKFHEDVGQSV LGVYRLRSIIVLDKSTPSSIILSSVLDNSRYMSVLELSGVPIKTVPNAIDIRCLPRRI VKLKKLRHLFAEKLHDATWRNFRCCTGVRFHKGLGNLTSLRTLHGLEAQEESIRHLGE LRQLRSLRVWNVKGAYSGRLCTSLVKLQFLSNLYIVASNENEALQLEEMNPPPPNLQR LFLRGRLADDILQEESPLFHHAARRNLYELRLYWSQLEQDPLPSLSLLLNLTDLRLTN TYIGERLVFLSEWFPNLRILFLRDMRNLKWLVVQKDAMKKLQRLTLVNLKNMRDVPLG IQFLMPLKYLGFLEITKEFLELLQSSSIKDFRWQHSLRDSETSCIKTITGRACKNQTA FLHMAP</aaseq>

Gene Sequence

<dnaseqindica>3542..3609#1924..2772#1398..1812#1..1257#atggctgaggccgtgattctttttgctgtgaggaagatcggtgttgcattgggaaatgaagcaaccagccaggctgtttcgtatttcaggaagtttgtcacgcagctaacagagcttcaaggcagcatgggccgcatcaggagggagctccggttgatgcatgagtttctctgtcgaatggatgtacgcaaccgtaataaccagacatatgaaatctgggtggaggagggacgagtacttgtacatgggatcgaagacattgtggacgaatatttgcatcttatcggtcagaagcttgacactggatggagcacctatctgaagaaaggaatcaagggacccaatgtcgtggtatccctgaacaggatagcttcattggttaaagaagccgaggtcaatctggtgcacctgtttcaggccaaggaccgatgggttttgcttccaagtgacagtaacgacaactcaagctacattgtcgagagatctcagcatttggcagccacttcatgttccatcagtgatgaagatcttgtggggattgatgattacaggagggatttggaaaagtggcttgaagatgatgaacctgcacaccttgtgatagccctgcttgggatgggagggcttggcaaaacagcccttgctgcaaatatctacaggagggcgaaggaaaagtttgaatgccatgcctgggtatccatctctcaaacatattcaagacaaggtgttttgagaaatttaattgggaagcttttcaaagatatagaggacgtaccaactgacattgccacgatggacatcacatcccttgaagagaaactgcatctttttctagtggagaagaaatacttgatcgtactagatgatgtttggagtacagaagcattcactgacttgtctaatgcacttgttcataacggcactggaagcaggcttgtaattacaacacgagacagtgaagtagccggccttgcttctaagaattatgtcgttgaactgaaaactttaccaagtgacaaggcaatggagttgttctgtaaaaaggccttccggagtgatacagatgacaaatgtcttgcaaagctaaatgatatttccgtggaaatcgtcagcaagtgcaaaggcttgcctcttgctattgtctctgttggtagtctcttgtttgtgcgtgagaaaaccacggaagaatggaaacggattaatgatcagctcagctgggagataatcaacaatccaaggctagatcatgtcaggaatgtattactcttgagcttcatataccttccttcttacctgaaaagttgtttcctatactgcagtttgtttccagaggactatcctcttaaaagaaaggaacttgtacggctatggtggcagaaaggttcattgtggaaaagggtgaaagcacactagaggaagtggcagaaggctacctaaaagagttggttcacaggaacatgctgcaactggtccaaaagaactcatttggtaggataagaagattcaaaatgcacgatatcgtgcgtgagctcgcggttgacttgtgtcggagagaatgttttggcattacatatgaggatggtcatcatgggagatcccttgaggaaaatgatgaacgtcgactggtaatacaaaaattccacgaggacgttggtcagtcggttttaggtgtgtaccggctccgctctatcattgtcctggataagagcactccatcatccattattttatcctctgtgttggacaactccaggtacatgtccgtgcttgagctaagtggagtacccatcaagacagttcccaatgctattggtaatcttttcaatctgcaccatttgggtctgcgaggctcaaaggtgaagttcctcccatagtccatcgagaagttgtccaatctgctgacgctggacctttctggatcagacatacggtgtctgccaagaaggatcgtcaagctgaagaagcttaggcacttatttgccgagaaactgcacgatgcaacctggagaaatttccgttgctgcactggtgtgcgcttccacaagggtctcggtaacctgacgagccttcggacgctacatgggctggaggcacaggaggagtccatcaggcatctcggagagctgaggcagctacgaagcctcagagtatggaacgtgaaaggagcctacagtggacgcctttgcacatctcttgttaagctacaattcctgtccaacctgtacattgtggcgagcaacgaaaacgaggctctccagctggaagagatgaacccgccgcctcccaaccttcagaggctgttcttgcgagggcggctagcagatgatatactgcaggaggagtctcccctcttccatcacgcagcaaggcgaaacctgtatgagctacggctgtattggtcccaattggaacaagaccctctgccatccctctccctgctgttgaatctgacagacctgaggctaaccaacacatacattggagagaggctggtgtttctttctgagtggtttcccaaccttaggatactcttcttaagagacatgcgtaatctgaaatggctggtggttcaaaaagacgccatgaagaaactgcaacggctaacactggttaacctcaaaaacatgagggacgtcccgttgggcattcagttcctcatgcccctgaaatatctaggctttctggaaatcaccaaggaattccttgagttattgcagtcctcttcgattaaagattttcggtggcagcattctcttcgagactctgagaccagtgttgatatctagctatctgctggtccgacactcttactagacagtgtaagttcaacttgcagctacatactggtattcaagtagtaactcctaccccatcttaatcagcaaaccttttgcatcatgtcctattggcaggaaaatgttttcgacaaggacgggatatatggattattggagcatcatcgatccttttgcaccaaacaatgctcaattgaggcttgccgttttggtgtccgtttcatgaataaatgaatgtcaagtggtcctcgtaacctatttgtgctgtcaacattttatctgcttgtttccattcctgtttcagtactgactacggagtactaggcttttgtctactatactattaaggagttctttatattgtttgggacagggagtcctatgtttatgagatgttttcccaggttttattagttctatatatcccacgaaaattctatttgttgttctgttttcaaatagtcctattggtttgcaaaaaattatatggttatataattgttagccatttatttttaaagcttcataatatcttaaacttttattgtggcttcatatctgcattgatagttacatctctatttaaggtgaactattcgtttaagtttaggttcgaaattacagctaatatctacaatggtgaacaaaacattatactattttctttaatcaatgattaagtttctgggatgttaaagtcccttaaaaacttgatgtgcataaaaggcaacaaggtgtatttgtaggttgcatcaagaccataactggtcgcgcttgcaaaaatcagactgcatttttgcatatggctccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0260800, RefSeq:Os08g0260800