Os08g0263600

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0263600| Description = Similar to Transposase| Version = NM_001067934.2 GI:297608293 GeneID:4345116| Length = 4189 bp| Definition = Oryza ...")
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Gene Name

Os08g0263600

Description

Similar to Transposase

Version

NM_001067934.2 GI:297608293 GeneID:4345116

Length

4189 bp

Definition

Oryza sativa Japonica Group Os08g0263600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9984998..9989186

Sequence Coding Region

9984998..9985093,9985165..9985742,9986950..9987408,9988379..9988496,9988926..9989186

Expression

GEO Profiles:Os08g0263600

Genome Context

<gbrowseImage1> name=NC_008401:9984998..9989186 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9984998..9989186 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcccactcagatgatgagatagctatccctttaagtgatgacgatgaaaggtttaatacaccaaaaaagaaaccaagcattcctctcaattgttcctcatttactcctgattgtgatgaggagataacgcctgcagttgggatgaaatttgaagacatcgaagctgttgagaaattctacaaatcctatgtgcatacagtaggtttttcagttcgtattgggcagcaaaagaagttgaatgaggtggttcagtgcaagtgtttcatgtgttcaaggcaaggatggaagtccaagaaaggaaatgaaatttctgatccttccaaaaaaagacgtaagttaaaggaaactagatgtggatgtgatgcacatatttttgttaagttgtgtagtgataacaagtaccatatagcttcattggttgagcaccatagccatggacttgtgtcacctgacaagctgcacttgatgcgatcaaaccgtgaagttagtgagagggcaaagaatacacttttcacatcccatagagcaagtgtaggaacctcccaggcatataggctccttcatgtgagtgatggcgggtttgagaatgttggatgcacgaagagagatttacaaaattactaccgtgatctaaggacaaaaatgaaaaatgcggatgctgaaatgttggagaatgtttacaatgattatggcaaccttctggaagaaatagctattgactcctcagaaatggccgtgagaaagaaaatttcagctgcatgcaacaagtttgaagatctcattcaaaaggctaagcactcagctgaagccatagatttcttaacatcaagtgtgttaagccttgaggcacctttggaccaaatggtcgctggtggcaggcaaactagacaggaagaatttgagtcatttcttggttgcaacattcctactgaagttgacatacttccaacgaccgatactcattcaagaggaagaatcaagagaataagaagtaaggaaaataaaaatcaaggaagtaacacaagtaagtaccaaggtggcaaggaacgaataccacgcttgtgcaagatttgcaaggaaatggtttttcatgacagccgcaattgtccaaataaaactagtatcagcccagatgatcgttttgaatcagtcttcaagctttgcttcgtcaccgccatcgccgaggagcttcgcgtcgtcgctgccgccgtaacagggatgaagattcgagggtggagattgaggcaatggcgaccgactacgagaggaaaggacgacgacctattcaccgcccgatttgtggcggccaccaacggcgacgaagacgctgaggagatgcagaggtacaggattgcaaggatggcaacgaaggaagccgaaggggcagcgggcggtgttgctaccatggtccagccatgggtgacgggctgcggcgtggttttcgggccatcgccgcggccaccatgcacatccgcctcctcctcattaacctgcaaaggaacctag</cdnaseq>

Protein Sequence

<aaseq>MDAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEI TPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKG NEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRS NREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMK NADAEMLENVYNDYGNLLEEIAIDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFL TSSVLSLEAPLDQMVAGGRQTRQEEFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSK ENKNQGSNTSKYQGGKERIPRLCKICKEMVFHDSRNCPNKTSISPDDRFESVFKLCFV TAIAEELRVVAAAVTGMKIRGWRLRQWRPTTRGKDDDLFTARFVAATNGDEDAEEMQR YRIARMATKEAEGAAGGVATMVQPWVTGCGVVFGPSPRPPCTSASSSLTCKGT</aaseq>

Gene Sequence

<dnaseqindica>1..96#168..745#1953..2411#3382..3499#3929..4189#atggatgcccactcagatgatgagatagctatccctttaagtgatgacgatgaaaggtttaatacaccaaaaaagaaaccaagcattcctctcaatgtaagtttgatttgtgtctatcaatctagcctaaattttaatgtgcttattgcatacacctggtttttcagtgttcctcatttactcctgattgtgatgaggagataacgcctgcagttgggatgaaatttgaagacatcgaagctgttgagaaattctacaaatcctatgtgcatacagtaggtttttcagttcgtattgggcagcaaaagaagttgaatgaggtggttcagtgcaagtgtttcatgtgttcaaggcaaggatggaagtccaagaaaggaaatgaaatttctgatccttccaaaaaaagacgtaagttaaaggaaactagatgtggatgtgatgcacatatttttgttaagttgtgtagtgataacaagtaccatatagcttcattggttgagcaccatagccatggacttgtgtcacctgacaagctgcacttgatgcgatcaaaccgtgaagttagtgagagggcaaagaatacacttttcacatcccatagagcaagtgtaggaacctcccaggcatataggctccttcatgtgagtgatggcgggtttgagaatgttggatgcacgaagagagatttacaaaattactaccgtgatctaaggacaaaaatgaaaaatgcggatgctgaaatgttgtggcccagttgtgtagacaaaaggagatcaattctgcatttttctatgattttgaagtggatgaaagcggtaggttggttcgtgtattttgggcagatgctacaagtaggaagaactacaatcactttggtgatatcgtatcctttgattctacatacaccactaaccaatatgatatatttttgcaccatttactggagttaaccatcatatgttgtgttctatggtgctgcatttttagcaaatgagaagattgagtcatacatttggttgtttaagacgtttttgcatgcaatgggagggaaagcacctacactcatcataactgatgaagatgctagcatgaaagctgctattaatcaagtccttcgaaacacggttcacaggctgtgtatgtggcatatcatgaaaaaaatatcagataagattgggcctctatggagagaaaatagtaagttaagagcaagaatgaagtcatgtgtttggcagtcggaaacagctatggagtttgaatcataatggcattctataatttccaaatttaatttagagggtaatgagtggttgtcaaaaagctatgatatccgtgaatcatggataccggcctacttcatggacatatctctagcgggcattctgagatccacttcaagatcaaagagtttaaattcattttttaaccgtttcattcatcgtaagcttgcctttgtacagttttggcttagatttgttacatctttagaatgccaacgccaagaagagttgaaggcagataacataattatccgcacaacatacaaacctgtaacaccttaggcaatagagaaacaaactagcattttattcacacatgaagtttttgagaaactccgagaaaagattgtagcagctagagacattgttgtgttaaagacatggtacaatatgaggggataaaaacaataaccataagtgatggctctcaaaagcttagggtggtgcaatgtgacacatcgacaatgatagcgaactattcatgcaagctatttgagtccgatggaattccatgctgtcatattattcaagtgttgagaggtgaaggtcaaaatgagctaccaaatgcctacatatgaagagatgggagaaaagattcaaaaggtagctatataaataatattcaatgttttcttttcttatttcaattgtctaactacctttttattgcagggagaatgtttacaatgattatggcaaccttctggaagaaatagctattgactcctcagaaatggccgtgagaaagaaaatttcagctgcatgcaacaagtttgaagatctcattcaaaaggctaagcactcagctgaagccatagatttcttaacatcaagtgtgttaagccttgaggcacctttggaccaaatggtcgctggtggcaggcaaactagacaggaagaatttgagtcatttcttggttgcaacattcctactgaagttgacatacttccaacgaccgatactcattcaagaggaagaatcaagagaataagaagtaaggaaaataaaaatcaaggaagtaacacaagtaagtaccaaggtggcaaggaacgaataccacgcttgtgcaagatttgcaaggaaatggtttttcatgacagccgcaattgtccaaataaaactagtatcaggtattgatattattatattcttcttattcaagggaatggtaggagctatgcaatgttcttggcttccatggcctaacttgatttactatttcttttagagatactacttggtcaggtgctgaagaatagttgaatgaagatggtagcaagagaatatgggaggcatctgcagtagcaggaaaacgatttagttgatcaggacaacttgcttgattttaatgtagctccttatatatgtacaagtgtatttctcattactgacatgctttagcaagcactgaaaattttcactatgcatgttcacataattaaacctggtattgataattttcacttagagacttcgatggaaaaaccagcaacaatttttacattcatgccagcaggccatcataaccttttacattcagattacaaggatttgagagatattacattcaatttaatctagatgaacatttctaccatgtaagaagaaagaaaaatgtgcagtctgctcaaaattcagaatggcaaacattctgaatttttctgaaaatatgtgcaaatcagatgtgcgtccgatttgttgttattgcttggtactgccaattgttgcttggtaacaccactaagcagtagcaatcattctcatcagaattattcttcttgcttcctcacaccacctaacagtagcaatgcttcctcaaattgatagctttcagaatggttaggaacaggggcatcgccacatactgcaatcactcaacaccggagagaaagctagtgcgcgtgtgtgcactaggatgggtactgtaaccaagagcaagtacggagttgcttccatatccgctgttgatgccaccttcagtactagtgagagggagagggggcattaaatattagggtttacagagaacttgaacaagagaaaaatggaatatgggaatgtgagagagcaaacctgcagcttagttcctcaataatgtagcccagatgatcgttttgaatcagtcttcaagctttgcttcgtcaccgccatcgccgaggagcttcgcgtcgtcgctgccgccgtaacagggatgaagattcgagggtggagattgagggtttcttttggcacctgtacacgcccctcgcaacgtccttagtatgcagttaaaatttaactcaccgacgaccaatatcgatcccatccttgcgccccctccccctactctcatagtccaagtaaattttttacttgatgttatccaacttcttagtagttctttatatagttaaaatataactctgtatgcatattgagttattttttaactctgtacgcaatgaattattaattatgagccctcagtaatttttttactgctataagaaccctgctcccaccaaccctcagctgtacctaggtagtaatatttttacttgatttaagtgtgagtatttataccgtaggaaatcctatccaaccattccttccaccatcaattactccatttttttcggatctacgatcgcctcaatcatgattacagcaatggcgaccgactacgagaggaaaggacgacgacctattcaccgcccgatttgtggcggccaccaacggcgacgaagacgctgaggagatgcagaggtacaggattgcaaggatggcaacgaaggaagccgaaggggcagcgggcggtgttgctaccatggtccagccatgggtgacgggctgcggcgtggttttcgggccatcgccgcggccaccatgcacatccgcctcctcctcattaacctgcaaaggaacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0263600, RefSeq:Os08g0263600