Os08g0270200

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0270200| Description = Exosome-associated family protein| Version = NM_001067952.1 GI:115475641 GeneID:4345136| Length = 6007 bp| Definiti...")
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Gene Name

Os08g0270200

Description

Exosome-associated family protein

Version

NM_001067952.1 GI:115475641 GeneID:4345136

Length

6007 bp

Definition

Oryza sativa Japonica Group Os08g0270200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10328437..10334443

Sequence Coding Region

10328505..10328720,10328819..10328878,10331234..10331288,10331374..10331454,10331536..10331747

Expression

GEO Profiles:Os08g0270200

Genome Context

<gbrowseImage1> name=NC_008401:10328437..10334443 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10328437..10334443 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgccgccgccgattccacttcggcggtgccacccgccgtggtgtccgccgccgaggacaccctcgcggccgccgagtccgtcggggaccacctcgccgagatggtcgcggcggcgggcgaggaccccgacgccatcgccgagctcccgccgctgcgccgcgcgcgcgcgtttctcgccatggcgaaggccgccgcctccctcttcgcagtgcggcttaggtgttcgggagttgatccggatgaacaccctatcaagaaggagtttgagaggttaagcttgtgggaggaaaagttaaatcgatttgaggactgggacaaggcaccattgcgcccaaccactacagtgaatacacaggcagcagcaaggttcattggtcactcattgccccatttgacaactgatcagaagaggagcatgcaggcaatcagtagaggagaaggagggagttactctgggaacaagagaaaaccacaaccaccgcggccaaataagaagtctgttcgtgctgccacggaagaattccttgcaaaagcagctctggagcttagtgggcataatgatagcaaggtgaagggccctattaggctcctctctgatgaagatgaggactaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAAADSTSAVPPAVVSAAEDTLAAAESVGDHLAEMVAAAGE DPDAIAELPPLRRARAFLAMAKAAASLFAVRLRCSGVDPDEHPIKKEFERLSLWEEKL NRFEDWDKAPLRPTTTVNTQAAARFIGHSLPHLTTDQKRSMQAISRGEGGSYSGNKRK PQPPRPNKKSVRAATEEFLAKAALELSGHNDSKVKGPIRLLSDEDED</aaseq>

Gene Sequence

<dnaseqindica>69..284#383..442#2798..2852#2938..3018#3100..3311#gcaaaacggcaaaacccaaaactcccctgccccatcaccgccgtctgcccgtcttcatccacccaaccatggccgccgccgccgccgccgattccacttcggcggtgccacccgccgtggtgtccgccgccgaggacaccctcgcggccgccgagtccgtcggggaccacctcgccgagatggtcgcggcggcgggcgaggaccccgacgccatcgccgagctcccgccgctgcgccgcgcgcgcgcgtttctcgccatggcgaaggccgccgcctccctcttcgcaggcaggcagctctcgcggtgacccccttcccgttatgactgcgtgacccgcatcgcttctgaccaattgtttttattactattattattattgttgcagtgcggcttaggtgttcgggagttgatccggatgaacaccctatcaagaaggagtttgtaagctctctctctctatatatatatatatacacctgcctagaatcctatctacttctacattgttctcacattctatagtagtagaaattcggtttcagatttgccaataagaacaaaagtttgggtgtatccttatataggtttctaatttatgttaacaatttctaattgggaatctttgtaccatgccatactattgtaaagaggagtcatggacttattttataccctgtttttagacaaaggcaaaccaccctgctttcatcccaagcaaataacgaggttcggcacagtagcatcagagaaaaggaaaaggaaatagctggttttaccagtgccctataaatcatagtaataactagtaagttcaatcttacaactaccattatcaaagcatatcacacagttaagtcacccctacagctgtctttaaagtggtggactgaaagctcatttagccagctcgtttgctcggctcacagcagccctgattatactcgtttatattccacaataaatcagtcgatgttaatttttgaaagtagactctcaaggagggattgattggactaggatggcgcaatctttattctttaaaggtgatatctcctgattatgctctggaggccgcgaaaccaaccagccataaatatatctcactcgaaagaaaccatgtagttttgcatgccttttcgatcttgtttgtactgcatgtatgctcgctccccttgcatccttccggttcccacatgcaaaatcacatacaaaaactgtttgcaccatagctcagtggaaagatgtcgtgacggtggataccctcctgtggcatgtgcacaagaattgaaagaaatactcaaataatcagtaggataatttgggatgtatcagtctgatcgttatctcatttctaaatttgctacaatgataataaatcaaaataagtaaaacacggtgcaaaactaagaaaagtaaagttgatccaatatactccctgatctttgaactcttgtagccattattgccctttgccctttgattacttccatattattttgcctttcttgatgtagcaattacctccagttttgcgtattggaatttagaaagaatgtgtacgataagttcctgcctgaggaaaaggctgctttcaatttccatgatcccttgccttatagattgtaaaagaaacagctgcaaaagaaaatagtgtaagatgataaacagattcacccccatttttcattcacatatataaggtgctagaggtttggcatggccgtgaatcccaagcaactagtgagcatattacataaaacttacacaatagaacactaaaatagcaggcacaagagcccccaagtacagttaaccacccaatgcaccatttaatgcataatcggggtggctacctggcgcctagcacctagggccaagttttgaacacttcattcacttatacaaaagatgtcaaatagaagttgacatcctgtcccactcgagagcctctatagtaatccagacaaaggtagctaagagacaggatgacaaaatattaataccatcctccatacctgaatacagcatgcactttcctggccacaaaaggaacaaacttacttccatgggatattgctttaacaaatcccttcattcttgtgtttctcacacaccaaaccaatttttttttcagtatagccatctaggaattaattttactgatctgtccagggtgtagtgagccacatcctgttcctgatcaagctgatcaggggataacaagatgcaaaagctaacactataatatactggattttcactttgtgcacttcttcccaaacttgtgtgcctcccataggatcagtgctgaataagtttttcccttgctggtattgtgtacttccttttatcctatctaatatctgaagcaacttaactgagctaccttctataatcccatatcctgatattcatacttagtaggcacaaattgatgatcctgatatttaagactaccactctacaatcctttggcagcttgaacattaaatcatccatgctctatgctcatttcacgaattgttatccagtttttcacctgattttggctagagcttgtaggtttgtaattccactcgtttatcctaacttctaatatggttttataactttggtgttcctggggcagtaatgcagttaaagattgaagtcttggatagggaagatttgagtttattcttagttagaaattttgcatggaacaatctaaaatggaaaatccaatcaatatgttttttcaattccaatgctgatactgtcagatgtttagttccacttctgcttcatttatttcaggagaggttaagcttgtgggaggaaaagttaaatcgatttgaggactgggacaagggtacttgacaactcattaactattggtggaaatatcatatctatgcacacgtataccaaattactgcttgtgttctgaattgcagcaccattgcgcccaaccactacagtgaatacacaggcagcagcaaggttcattggtcactcattgccccatttgacaactggtacataattgtttattgaaaagttttacgaacggtttggttttttatggtgtagtgttgaggtttcatttgctatttcagatcagaagaggagcatgcaggcaatcagtagaggagaaggagggagttactctgggaacaagagaaaaccacaaccaccgcggccaaataagaagtctgttcgtgctgccacggaagaattccttgcaaaagcagctctggagcttagtgggcataatgatagcaaggtgaagggccctattaggctcctctctgatgaagatgaggactaagattgtgtattgttggttttatccagaggtattccttgctgcttccttgcattcatgatttctatatcattgcaatcaaggtctgaactggcttggataagggtccagagccctatagggcactagccctctagtagctctagcagggtctccactaagagaagctctgaggcttagggctaactttagagatttgattgattgattaataatagagtacatactaccacaccaaaggaaataatgtctaaaattgtagaaaccaacccaatctctatctctaatttactatcagagctcatttatttcctaactagataatcgcctacctttaattgatgtttttcctaatctgttatgcctaacctgctgcatgggcctggcccatgtctataacatattgctccatagtgacaatatgatgtaatcacgatacttgcaacacttaaatgcccattgtttgttggctgaaccccattgaactagccaaaaccagcagtcaagccgcggtcagactggcagatgtgagtccttttagccttttaatttggggtgcatttttagactttgtaatactagctccactttatcgctgattaggtgcttttgcctgaattttttttcctccaaatgaagttgattttggacttgagatttggtggtaatgtagttcatgcctctctagtaaatttttcatgaatttagagaacttttaggtcccgttttcatgtattttcacttatttgatggttttcaccagatatttccccgtataaccaatgggcccagttctgacttaatccattttgttattgaagggcatgtttaaaccgaatgttatcttcttgctttaataactgatcaggatttcttatgcacaactgctcaaagctaccaccaaactagttagcctcaagaatacccatatagcaccctagattagcattgagctgagtccttaaactattcctcaacacctaaaattaaaaatgttgctactaaatttgagtagaaatctccccgaaataaagcaattaatgggatagcaaatcttgataaccccatagctggtcacattacaatactataacagtaacaataaggtgccggtaataatagaaaatagaaccatgttctgcacaaaccgcaaagtacccacatgctaccaataactgaattccagctgaactgagctaaaacattaaaaatataattatgataaccaaacatgataactaaacttaatattcatggaacactgtgtgtatggtactaaccaagggcatacatacagtagtagcataatgttgcccctttgtttggcagaaattatcaaactcttctgtatttccagacttcttttaatcagggtccgcacatttcacaggtccccaaccaaataagtccatatccttccttggttcctgctactttcttgcatttatttctgctacatttcttggttttgcttctaactctaccttgaaactccacagaggatctttttcccatgtttggtgctgctcatctagtgcatatttcctccgagcctacaacccaccttttgtgtctcaagtctacattgtattgctttcaaacctctcctgcaacttcagtgctccaagagtggaatccttcattccttcctcaagatttctttccttcttttatttagatttttcctggcccttcatcttagttacttgtgcttacatctttacctgcacaagctagccattggaattagatgcaatcatcaaattaaatattgggcacaacaaaaaatgccagaacctataagtttataaactgtattcactgctagccatgcaattactccagacatacacgtcaactattctcacaatctcaatgcaaacacttctctatacattccactctactgtgtgatttcagtccctcacttctacttgataaagacgacagcatgatgcaggtagaggtttgagacaacagctcaacgtgctagggtaataatccttttatgacaggatcattgatctaactaaactgagcggatacatttcagtggctgtaactggggtgaaaaaaatgatactataactatgccactcaagatactagtactgtagaaagtttctgttaagcataatgctagagaagggcaacttgaagcaactcacatttttgttatttgacattttagacttgtcattgtcaaggctagcttgagattagtttttttttttaacacttccgataaattgtggctatccttttaaatgcctcaattgtttgtttcacttccatgcagatgaaatactagctgcctacttcaaagaatggataaagtgcggtataacttactctgcaatcaagaaaattttgcttagttgtgctgtggtgtacataccaaggcagaatgaagtagacaagctagatgtaaactgtaatagttattatctttgccttgagagcaatattgtagtcctgtctgaatgtcattttcagaaggaaattttgactgtttttagttaaagcactgaccctcgaatggcagttgagtccattgctgaagatttgatctagtggtgtttgagactgtttaacatcgccgtagcgtgaatgttgccaaagtagtctgcttgtccagttcctgtgagtgcttgtatgatgtattatatttttctttagtgaacagccttttacgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0270200, RefSeq:Os08g0270200