Os08g0276000

From RiceWiki
Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0276000| Description = Similar to Transmembrane protein TM9SF3 (Fragment)| Version = NM_001188562.1 GI:297726254 GeneID:9266768| Length = 3...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0276000

Description

Similar to Transmembrane protein TM9SF3 (Fragment)

Version

NM_001188562.1 GI:297726254 GeneID:9266768

Length

3662 bp

Definition

Oryza sativa Japonica Group Os08g0276000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10620773..10624434

Sequence Coding Region

10622039..10622300,10622445..10622461

Expression

GEO Profiles:Os08g0276000

Genome Context

<gbrowseImage1> name=NC_008401:10620773..10624434 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10620773..10624434 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtggatttcaaggagagtgatatcaagtgggcatctcgctggctgggatacctatctactgatgacggatgaccaaatccactggttttccattgtgaattccctcatgattatcctcttcctttctggaatggttgcaatgatcatgctccgaaccctttaccgggatatctccaagtataaccagcttgggactcaggaagaagcccaggaagaaacaggatggaagcttgtccatggtgatgttttcaggcctccatccaactctgactag</cdnaseq>

Protein Sequence

<aaseq>MMWISRRVISSGHLAGWDTYLLMTDDQIHWFSIVNSLMIILFLS GMVAMIMLRTLYRDISKYNQLGTQEEAQEETGWKLVHGDVFRPPSNSD</aaseq>

Gene Sequence

<dnaseqindica>2135..2396#1974..1990#aatctcgtctcgccattctctctctcacacacacacctcgcgtcgcctccctccccgagcgagcgagcgagcgtgcgcgtgcctacgccctcctctctaccgccatggcgatctcgccggtggcggcgatggcgctggccatcgccctcgcggcgctctgcctcgcggggctggccgccgggttctacctcccaggcgtcgcgcccaacaacttcgacaaggtgtgcccactccttcctctactctcccctttatcctctttcacggcatgatctctccgctgcgtttgttttttttttgtcggatctggggttggggtggccagatctacggcccgcgctgttgcgcccgccgcgagatctgggtgtcggtggtggtggcatgtactagggggggggggggtagattaggatgcgagatcgtgcgccaatgcaggtggtgttgggaatgtatgtctggatgctgagaaacccacgctgaaatcatgttccgcgttcagagtgcgttgaatgaaaccgtgtgcgtagggagacgcgctgatcaatgtgcgcggtttgctgcatcaacaaatacctgtaaggtggcatcgtagtatgagcttgttgggtattgatgcttaattgcggttgctatcggtcatggtaggttattaagtgatgtgtagttttggaagatatgattggacattttggggctgtaaacctgggtagtacatgtccaaacaaaacttagtttttcccaattggggtcccaacttgttttaccatgtgacaaacaatagtttaggtcgtatgtttttaattgttcaccttccaaaaaaaatggttatactttttttagttgattccgtttctatgtttgtgctagttattaacatctgactgtctttgtagtagtcatgctcatagatgaaacgaagggtttaacgctttcagtatgcatcaatatgagactaccggacaaattacttgctatttctaactatagtgatatttctttgtttacagaaagatcctcttcaagtgaaagtcaacaaattgacatcaatcaagacccagcttccctactcttatgtcgacagtgctcaaaatctcggtgaagttcttcgtggtgatcgaatcgagaactctccatacacggtttgttactctatcgcgttttctttgattatttcttgatatattggtcctaaggttaatattttaacttctattctttccagtttgaaatgagagagcctcaaatgctgtcaaatagtctgcaagatttctgtcggggagaaagaagcaaagattctcaaggaaaagattgaagatgagtaccgtgtgaacatgcaagctagtgtaacttggtttcttgattctaagagcttattcatggctgccaaatattctaaacattcattttctcaacatgattcttgacaacttacctctagttgttccaattaaaagaatggaccaagaaggtgcatatttctatcagcatgtcttccatgttggagccaaaggacaatatgcaagggtaagtgtaactttgagtattgatcacatgctatgaaaatgcaaagttcttatatcgtgcactttcttccctttttctgtttgtacttggcagagcaaggatgaaaagagcttcattcacaaccatttatcatttactgtgaagtatcacagggatgcccaaagggatgtttctaggatagttgcatttgaagtgaaaccatacagttatgctgcatgtgatttattaaacaagtaggcctttgaagtatttggatgttgactgtccttcctgctgttaaatttacactaaaaactatgacatatgctgcagcgttaaacatgaatacgaaggacagtggaatgacaagaagacccgcctgaccacttgtgatcctcatgcaaaacatataattacatcatctgattctccccaggaggttgaagttggcaaagacataatatttacttatgatgtggatttcaaggtgagatatatgtgcacttttttccgatcgttctgctctaatgaaatgatcgcagtagctagaaattgttcagtgtgcactagatggagtgctaatattttgttaccatctatgcgtccttttgactattctgtcaatttgcaggagagtgatatcaagtgggcatctcgctggctgggatacctatctactgatgacggatgaccaaatccactggttttccattgtgaattccctcatgattatcctcttcctttctggaatggttgcaatgatcatgctccgaaccctttaccgggatatctccaagtataaccagcttgggactcaggaagaagcccaggaagaaacaggatggaagcttgtccatggtgatgttttcaggcctccatccaactctgactagctctgtgtttatgtcggtacaggagtccagtttattggcatgctgcttgtcaccatggtctttgcagtccttggattcctttctccatcaaacaggggtggactgatgacagcgatgctcttgctttgggtattcatggggttgctcgctggctactcttcttcaagtctttacaagttgttcaagggcgcagaatggaagaacattgcattgaggacagccttcactttccctggcagtgtatttgctattttcttcttcctgaattctcttatttgggggcagaagtcctcaggcgcagttccattcaccacaatgtttgcccttgtcctcctttggttcggtatctcagtgcccctagtatttgttgggagtttccttggcttcaagaagcctgcaattgaggatcccgtgaaaacaaacaagatacccaggcagattcctgagcaggcctggtacatgaacccgatcttctcaattctaattggaggaatccttccatttggtgctgtattcattgagctctttatcctgacctccatctggctgcaccagttctactacatctttgggttctgatcctggtcataacttgtgctgagatctcgatcgtgctctgctacttccagctgtgcagcgaggactatctgtggtggtggaggtcatacttgacatcagggtcttctgctatctacctgttcttgtatgcaaccttctacttcttcacaaagctggagatcacaaagtttgtgtcagctgttctgtacttcggttacatgcttaccgcctcatatgccttctttgccttgactggtacgatcggattctacgcatgcttcctgttcactaggctgatgtactcttctgtcaagatcgagtaaagaggctgtcttgcctaattctttattgccacggcaagtactgatcctgcggagtgcggacagtgaatatggtctccaagcttagttgcctgtggcatcagttttgagttttcaaagctggtagttaagatgaactggtgatttgttatcccatgattcaggtatcatagctagctcagtggttttttgttttcattttcttttaccttttcttctttttatggatttagcccttggatcacggcctattaagtggttgttgcagagttaattgtatacgaatgctgagtaatccatttctctccctatcagaatgttatgtacttgttgacctataatgcgactaccattaaagatattactgcagttgaaatattcatcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0276000, RefSeq:Os08g0276000